Jatropha Genome Database

JcCA0109511.10 (JcS_100808.40)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0109511
Scaffold:
JcS_100808 JcCA0149281(-) =JcCB0352111(+) =JcCA0122171(+) =JcCA0109511(+) =JcCB0078031(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SJL4_RICCO 489 73.7 83.8 (tr|B9SJL4) Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0763260 PE=4 SV=1
Arabidopsis_pep AT3G11950.1 426 66.0 81.1 | Symbols: | prenyltransferase/ zinc ion binding | chr3:3783273-3785098 REVERSE
soybean_pep Glyma19g39140.1 420 61.8 79.0  
Medicago_pep --No_Hits--        
grape_pep GSVIVT01033426001 415 64.9 81.6  
castor_bean_cds 29769.m000449 751 85.4 85.4 hypothetical protein
castor_bean_pep 29769.m000449 489 73.7 83.8 hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0109511.10 length: 323 aa.
IPR001293 Zinc finger, TRAF-type
method AccNumber shortName E-value location
Molecular Function GO:0008270 zinc ion binding    
ProfileScan PS50145 ZF_TRAF 10.390 214-254
no_ID  
HMMPanther PTHR10131 TNF 0.00044 189-316
HMMPfam PF02176 zf-TRAF 2.7e-07 214-255
Seg seg seg NA 9-20