Jatropha Genome Database

JcCA0077901.10 (JcS_100421.50)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0077901
Scaffold:
JcS_100421 JcCA0234541(+) =JcCA0073821(+) =JcCB0268641(+) =JcCB0128551(-) =JcCA0077901(-) =JcCB0534371(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9SMT1_RICCO 705 80.3 86.0 (tr|B9SMT1) Metal transporter, putative OS=Ricinus communis GN=RCOM_0470840 PE=4 SV=1
Arabidopsis_pep AT1G80830.1 638 72.0 81.2 | Symbols: NRAMP1, PMIT1, ATNRAMP1 | NRAMP1 (NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 1); inorganic anion transmembrane transporter/ manganese ion transmembrane transporter/ metal ion transmembrane transporter | chr1:30373066-30375644 REVERSE
soybean_pep Glyma13g44710.1 685 76.8 84.4  
Medicago_pep IMGA|Medtr3g100650.1 488 56.7 71.7 Natural resistance-associated macrophage protein chr03_pseudomolecule_IMGAG_V3 24149128-24144262 F EGN_Mt090430 20090702
grape_pep GSVIVT01034237001 668 78.0 84.9  
castor_bean_cds 29588.m000852 1176 89.4 89.4 metal transporter, putative
castor_bean_pep 29588.m000852 705 80.3 86.0 metal transporter, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0077901.10 length: 437 aa.
IPR001046 Natural resistance-associated macrophage protein
method AccNumber shortName E-value location
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
FPrintScan PR00447 NATRESASSCMP 1.5e-68 19-45
47-66
72-93
122-145
232-251
260-277
292-311
HMMPanther PTHR11706 MANGANESE 4.4e-246 1-430
HMMPfam PF01566 Nramp 1.1e-105 1-322
HMMTigr TIGR01197 nramp: 1.3e-88 1-316
no_ID  
HMMPanther PTHR11706:SF10 METAL 4.4e-246 1-430
Seg seg seg NA 53-67
374-384