Jatropha Genome Database

JcCA0077741.10 (JcS_109962.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0077741
Scaffold:
JcS_109962 JcCB0397471(-) =JcCA0077741(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RCH4_RICCO 853 83.9 90.3 (tr|B9RCH4) Acc synthase, putative OS=Ricinus communis GN=RCOM_1688460 PE=3 SV=1
Arabidopsis_pep AT3G61510.1 643 62.8 76.5 | Symbols: ACS1, AT-ACS1 | ACS1 (ACC SYNTHASE 1); 1-aminocyclopropane-1-carboxylate synthase | chr3:22763495-22765730 REVERSE
soybean_pep Glyma08g02130.1 735 71.9 84.9  
Medicago_pep IMGA|AC235567_32.1 678 66.7 81.5 Aminotransferases class-I pyridoxal-phosphate-binding site; ; AC235567.1 113311-109020 E EGN_Mt090430 20090702
grape_pep GSVIVT01019414001 745 74.9 83.7  
castor_bean_cds 30190.m011272 920 83.0 83.0 acc synthase, putative
castor_bean_pep 30190.m011272 853 83.9 90.3 acc synthase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0077741.10 length: 484 aa.
IPR001176 1-aminocyclopropane-1-carboxylate synthase
method AccNumber shortName E-value location
Biological Process GO:0009058 biosynthetic process    
Molecular Function GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity    
FPrintScan PR00753 ACCSYNTHASE 3.3e-111 49-75
82-98
119-139
141-162
195-219
231-254
270-294
302-325
IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0009058 biosynthetic process    
Molecular Function GO:0030170 pyridoxal phosphate binding    
PatternScan PS00105 AA_TRANSFER_CLASS_1 NA 276-289
IPR004839 Aminotransferase, class I/II
Biological Process GO:0009058 biosynthetic process    
Molecular Function GO:0016769 transferase activity, transferring nitrogenous groups    
Molecular Function GO:0030170 pyridoxal phosphate binding    
HMMPfam PF00155 Aminotran_1_2 1.7e-103 47-432
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 2.1e-69 69-325
IPR015424 Pyridoxal phosphate-dependent transferase, major domain
superfamily SSF53383 PLP-dependent 1.9e-102 9-436
no_ID  
HMMPanther PTHR11751 SUBGROUP 1.7e-211 77-444
HMMPanther PTHR11751:SF26 ACC 1.7e-211 77-444
Seg seg seg NA 250-265