Jatropha Genome Database

JcCA0075831.20 (JcS_100270.80)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0075831
Scaffold:
JcS_100270 JcCB0130701(-) =JcCD0091855(-) =JcCB0155101(+) =JcCB0049611(+) =JcCA0075831(+) =JcCB0095651(+) =JcCA0309871(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RAM0_RICCO 781 75.4 80.5 (tr|B9RAM0) DELLA protein RGL1, putative OS=Ricinus communis GN=RCOM_1507300 PE=4 SV=1
Arabidopsis_pep AT1G66350.1 245 37.2 55.4 | Symbols: RGL1, RGL | RGL1 (RGA-LIKE 1); transcription factor | chr1:24748327-24749862 FORWARD
soybean_pep Glyma17g13680.1 623 65.4 75.1  
Medicago_pep IMGA|Medtr8g109760.1 621 62.9 72.1 GRAS transcription factor chr08_pseudomolecule_IMGAG_V3 24691711-24693403 E EGN_Mt090430 20090702
grape_pep GSVIVT01007532001 639 63.6 71.1  
castor_bean_cds 30147.m013794 1292 89.3 89.3 DELLA protein RGL1, putative
castor_bean_pep 30147.m013794 781 75.4 80.5 DELLA protein RGL1, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0075831.20 length: 512 aa.
IPR005202 Transcription factor GRAS
method AccNumber shortName E-value location
HMMPfam PF03514 GRAS 2.6e-110 140-511
ProfileScan PS50985 GRAS 58.372 114-492
no_ID  
Seg seg seg NA 84-97
116-137
159-171