Jatropha Genome Database

JcCA0068741.10 (JcS_103661.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0068741
Scaffold:
JcS_103661 JcCA0068741(+) =JcCB0089711(-) =JcCB0287851(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9RAF1_RICCO 1119 87.1 90.1 (tr|B9RAF1) Acetolactate synthase OS=Ricinus communis GN=RCOM_1506000 PE=3 SV=1
Arabidopsis_pep AT3G48560.1 1023 83.5 90.9 | Symbols: CSR1, ALS, AHAS, TZP5, IMR1 | CSR1 (CHLORSULFURON/IMIDAZOLINONE RESISTANT 1); acetolactate synthase/ pyruvate decarboxylase | chr3:18001530-18003542 REVERSE
soybean_pep Glyma13g31470.1 1033 83.8 90.9  
Medicago_pep IMGA|Medtr3g150570.1 1019 81.9 91.9 Thiamine pyrophosphate enzyme, central region chr03_pseudomolecule_IMGAG_V3 39709851-39707521 E EGN_Mt090430 20090702
grape_pep GSVIVT01033088001 746 85.6 92.3  
castor_bean_cds 30147.m014497 1671 87.1 87.1 acetolactate synthase, putative
castor_bean_pep 30147.m014497 1119 87.1 90.1 acetolactate synthase, putative
JAT_13201ests gi|268525116|gb|FM895758.1|FM895758 1132 99.5 99.5 FM895758 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002738, mRNA sequence
KJC_r1 KJC_c00456 3568 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0068741.10 length: 666 aa.
IPR000399 TPP-binding enzymes, conserved site
method AccNumber shortName E-value location
Molecular Function GO:0000287 magnesium ion binding    
Molecular Function GO:0016740 transferase activity    
Molecular Function GO:0030976 thiamin pyrophosphate binding    
PatternScan PS00187 TPP_ENZYMES NA 517-536
IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030976 thiamin pyrophosphate binding    
HMMPfam PF02775 TPP_enzyme_C 7.4e-47 480-635
IPR012000 Thiamine pyrophosphate enzyme, central domain
Molecular Function GO:0000287 magnesium ion binding    
Molecular Function GO:0030976 thiamin pyrophosphate binding    
HMMPfam PF00205 TPP_enzyme_M 1.5e-40 285-416
IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain
Molecular Function GO:0030976 thiamin pyrophosphate binding    
HMMPfam PF02776 TPP_enzyme_N 6.7e-55 94-258
IPR012846 Acetolactate synthase, large subunit, biosynthetic
Molecular Function GO:0000287 magnesium ion binding    
Molecular Function GO:0003984 acetolactate synthase activity    
Biological Process GO:0009082 branched chain family amino acid biosynthetic process    
Molecular Function GO:0030976 thiamin pyrophosphate binding    
Molecular Function GO:0050660 FAD binding    
HMMTigr TIGR00118 acolac_lg: 1.1e-255 93-660
no_ID  
Gene3D G3DSA:3.40.50.1220 no description 1.2e-43 280-427
Gene3D G3DSA:3.40.50.970 no description 1.4e-61 84-281
431-640
HMMPanther PTHR18968 THIAMINE 2.3e-198 323-666
HMMPanther PTHR18968:SF13 ACETOLACTATE 2.3e-198 323-666
Seg seg seg NA 11-37
65-85
514-529
superfamily SSF52467 DHS-like 4.7e-57 245-479
superfamily SSF52518 Thiamin 3.6e-56 453-658
92-271