| JcS_107930 | JcCA0062081(-) =JcCA0296991(-) |
| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | Q9SI38_ARATH | 121 | 95.2 | 96.8 | (tr|Q9SI38) At2g14210 OS=Arabidopsis thaliana GN=At2g14210 PE=2 SV=1 |
| Arabidopsis_pep | AT2G14210.1 | 121 | 95.2 | 96.8 | | Symbols: ANR1, AGL44 | AGL44 (AGAMOUS-LIKE 44); DNA binding / transcription factor | chr2:6018841-6023585 FORWARD |
| soybean_pep | Glyma08g07000.1 | 117 | 93.4 | 100.0 | |
| Medicago_pep | IMGA|Medtr2g009970.1 | 116 | 90.2 | 98.4 | Transcription factor, MADS-box chr02_pseudomolecule_IMGAG_V3 2293660-2295970 E EGN_Mt090430 20090702 |
| grape_pep | GSVIVT01009219001 | 119 | 96.7 | 100.0 | |
| castor_bean_cds | 29804.m001536 | 170 | 86.8 | 86.8 | mads box protein, putative |
| castor_bean_pep | 29804.m001536 | 119 | 96.7 | 98.3 | mads box protein, putative |
| JAT_13201ests | gi|262091321|gb|GT228748.1|GT228748 | 50.1 | 88.9 | 88.9 | JC313 Jatropha seeds from fruits at three stages of maturation Jatropha curcas cDNA clone PL06SE.E07.scf 5', mRNA sequence |
| KJC_r1 | --No_Hits-- |
| JcCA0062081.20 | length: 78 aa. | |||
| IPR002100 | Transcription factor, MADS-box | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003700 | transcription factor activity | ||
| Cellular Component | GO:0005634 | nucleus | ||
| Biological Process | GO:0006355 | regulation of transcription, DNA-dependent | ||
| Molecular Function | GO:0043565 | sequence-specific DNA binding | ||
| FPrintScan | PR00404 | MADSDOMAIN | 2.1e-29 | 3-23 23-38 38-59 |
| HMMPfam | PF00319 | SRF-TF | 7.4e-27 | 10-59 |
| HMMSmart | SM00432 | no description | 3e-40 | 1-60 |
| PatternScan | PS00350 | MADS_BOX_1 | NA | 3-57 |
| ProfileScan | PS50066 | MADS_BOX_2 | 31.595 | 1-61 |
| superfamily | SSF55455 | SRF-like | 1.7e-25 | 1-61 |
| no_ID | ||||
| HMMPanther | PTHR11945 | MADS | 6.7e-38 | 10-61 |
| HMMPanther | PTHR11945:SF19 | MADS | 6.7e-38 | 10-61 |