Jatropha Genome Database

JcCA0045271.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0045271
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl Q60D03_SOLDE 222 53.4 71.1 (tr|Q60D03) Pyridoxal-dependent decarboxylase, C-terminal sheet domain containing protein (Fragment) OS=Solanum demissum GN=SDM1_56t00020 PE=3 SV=2
Arabidopsis_pep --No_Hits--        
soybean_pep Glyma06g02290.1 181 44.9 60.7  
Medicago_pep IMGA|Medtr3g157420.1 191 52.3 64.5 Orn/DAP/Arg decarboxylase 2 chr03_pseudomolecule_IMGAG_V3 41516251-41514746 E EGN_Mt090430 20090702
grape_pep GSVIVT01015446001 181 49.4 69.9  
castor_bean_cds --No_Hits--        
castor_bean_pep 30170.m014298 186 45.7 65.2 ornithine decarboxylase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0045271.10 length: 205 aa.
IPR000183 Orn/DAP/Arg decarboxylase 2
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
HMMPfam PF00278 Orn_DAP_Arg_deC 4.7e-22 88-192
HMMPfam PF02784 Orn_Arg_deC_N 1.1e-14 1-84
IPR002433 Ornithine decarboxylase
Biological Process GO:0006596 polyamine biosynthetic process    
FPrintScan PR01182 ORNDCRBXLASE 1.3e-07 109-122
144-154
164-177
IPR009006 Alanine racemase/group IV decarboxylase, C-terminal
Molecular Function GO:0003824 catalytic activity    
superfamily SSF50621 Alanine 4e-33 51-198
no_ID  
Gene3D G3DSA:2.40.37.10 no description 2.2e-34 55-198
HMMPanther PTHR11482 ARGININE/DIAMINOPIMELATE/ORNITHINE 1e-56 1-190