Jatropha Genome Database

JcCA0043771.10 (JcS_107804.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0043771
Scaffold:
JcS_107804 JcCA0043771(+) =JcCA0249841(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl D7U4U0_VITVI 484 81.5 86.1 (tr|D7U4U0) Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00023897001 PE=4 SV=1
Arabidopsis_pep AT4G38430.1 428 73.5 79.9 | Symbols: ATROPGEF1, ROPGEF1 | ROPGEF1; Rho guanyl-nucleotide exchange factor/ protein binding | chr4:17986643-17988659 FORWARD
soybean_pep Glyma11g10330.1 443 74.9 81.6  
Medicago_pep IMGA|Medtr7g070990.1 317 65.9 75.6 Protein of unknown function DUF315 chr07_pseudomolecule_IMGAG_V3 14520598-14517482 E EGN_Mt090430 20090702
grape_pep GSVIVT01023897001 484 81.5 86.1  
castor_bean_cds 29683.m000479 597 85.9 85.9 Rop guanine nucleotide exchange factor, putative
castor_bean_pep 29683.m000479 475 81.0 86.7 Rop guanine nucleotide exchange factor, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c05724 1522 99.5 99.5  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0043771.10 length: 334 aa.
IPR005512 Rop nucleotide exchanger, PRONE
method AccNumber shortName E-value location
Molecular Function GO:0005089 Rho guanyl-nucleotide exchange factor activity    
HMMPfam PF03759 PRONE 1.8e-110 92-313
ProfileScan PS51334 PRONE 75.834 85-334
no_ID  
Seg seg seg NA 2-14
27-40