| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | B0FMV7_EUPES | 113 | 94.8 | 96.6 | (tr|B0FMV7) Dormancy associated MADS-box 2 OS=Euphorbia esula GN=DAM2 PE=2 SV=1 |
| Arabidopsis_pep | AT2G22540.1 | 100 | 80.7 | 91.2 | | Symbols: SVP, AGL22 | SVP (SHORT VEGETATIVE PHASE); transcription factor/ translation repressor, nucleic acid binding | chr2:9580417-9583603 FORWARD |
| soybean_pep | Glyma15g06300.1 | 103 | 87.9 | 91.4 | |
| Medicago_pep | IMGA|Medtr4g121100.1 | 102 | 82.8 | 93.1 | Transcription factor, MADS-box; Transcription factor, K-box chr04_pseudomolecule_IMGAG_V3 28275062-28285049 F EGN_Mt090430 20090702 |
| grape_pep | GSVIVT01015641001 | 107 | 87.9 | 89.7 | |
| castor_bean_cds | 29838.m001690 | 224 | 91.3 | 91.3 | mads box protein, putative |
| castor_bean_pep | 29838.m001690 | 112 | 94.8 | 96.6 | mads box protein, putative |
| JAT_13201ests | --No_Hits-- | ||||
| KJC_r1 | --No_Hits-- |
| JcCA0040481.10 | length: 97 aa. | |||
| IPR002100 | Transcription factor, MADS-box | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003700 | transcription factor activity | ||
| Cellular Component | GO:0005634 | nucleus | ||
| Biological Process | GO:0006355 | regulation of transcription, DNA-dependent | ||
| Molecular Function | GO:0043565 | sequence-specific DNA binding | ||
| FPrintScan | PR00404 | MADSDOMAIN | 8.3e-29 | 3-23 23-38 38-59 |
| HMMPfam | PF00319 | SRF-TF | 1.7e-26 | 9-59 |
| HMMSmart | SM00432 | no description | 6.4e-40 | 1-60 |
| PatternScan | PS00350 | MADS_BOX_1 | NA | 3-57 |
| ProfileScan | PS50066 | MADS_BOX_2 | 30.109 | 1-61 |
| superfamily | SSF55455 | SRF-like | 2e-26 | 1-84 |
| no_ID | ||||
| HMMPanther | PTHR11945 | MADS | 2.3e-38 | 10-66 |
| HMMPanther | PTHR11945:SF19 | MADS | 2.3e-38 | 10-66 |
| Seg | seg | seg | NA | 59-70 |