Jatropha Genome Database

JcCA0029471.20 (JcS_108067.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0029471
Scaffold:
JcS_108067 JcCA0077351(+) =JcCA0029471(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SF88_RICCO 1078 81.9 87.8 (tr|B9SF88) Stachyose synthase, putative OS=Ricinus communis GN=RCOM_1095590 PE=4 SV=1
Arabidopsis_pep AT5G40390.1 912 69.0 79.4 | Symbols: SIP1 | SIP1 (seed imbibition 1-like); galactinol-sucrose galactosyltransferase/ hydrolase, hydrolyzing O-glycosyl compounds | chr5:16161720-16165085 FORWARD
soybean_pep Glyma06g18890.1 882 66.6 78.2  
Medicago_pep IMGA|Medtr3g114540.1 893 67.7 78.9 Raffinose synthase chr03_pseudomolecule_IMGAG_V3 29013492-29016790 E EGN_Mt090430 20090702
grape_pep GSVIVT01032425001 988 75.5 84.0  
castor_bean_cds 29933.m001398 1041 82.2 82.2 Stachyose synthase precursor, putative
castor_bean_pep 29933.m001398 1078 81.9 87.8 Stachyose synthase precursor, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c09399 1306 98.4 98.4  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0029471.20 length: 650 aa.
IPR008811 Raffinose synthase
method AccNumber shortName E-value location
HMMPfam PF05691 Raffinose_syn 0 25-621
IPR017853 Glycoside hydrolase, catalytic core
superfamily SSF51445 (Trans)glycosidases 2e-53 205-564
no_ID  
Seg seg seg NA 231-250
398-410