Jatropha Genome Database

JcCA0029141.10 (JcS_101485.40)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0029141
Scaffold:
JcS_101485 JcCD0055831(+) =JcCA0140001(-) =JcCA0029141(+) =JcCA0275841(-) =JcCB0216691(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9S156_RICCO 1004 78.7 84.9 (tr|B9S156) Starch synthase, putative OS=Ricinus communis GN=RCOM_0633900 PE=3 SV=1
Arabidopsis_pep AT4G18240.1 848 66.5 80.7 | Symbols: ATSS4, SSIV, SS4 | ATSS4; transferase, transferring glycosyl groups | chr4:10082221-10087044 FORWARD
soybean_pep Glyma05g25790.1 885 67.8 80.6  
Medicago_pep IMGA|Medtr5g032130.1 248 35.7 53.6 Starch synthase catalytic region chr05_pseudomolecule_IMGAG_V3 12928209-12924338 E EGN_Mt090430 20090702
grape_pep GSVIVT01021404001 925 70.7 83.6  
castor_bean_cds 29693.m002052 1296 88.2 88.2 starch synthase, putative
castor_bean_pep 29693.m002052 1004 78.7 84.9 starch synthase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c02892 1025 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0029141.10 length: 635 aa.
IPR013534 Starch synthase, catalytic domain
method AccNumber shortName E-value location
HMMPfam PF08323 Glyco_transf_5 1.1e-63 412-635
no_ID  
Coil coil coiled-coil NA 41-62
69-104
144-179
182-217
220-272
275-303
307-328
HMMPanther PTHR12526 GLYCOSYLTRANSFERASE 2.3e-50 412-635
HMMPanther PTHR12526:SF17 STARCH 2.3e-50 412-635
Seg seg seg NA 190-204
426-437
superfamily SSF53756 UDP-Glycosyltransferase/glycogen 2.8e-34 412-635