Jatropha Genome Database

JcCA0028741.10 (JcS_100440.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0028741
Scaffold:
JcS_100440 JcCA0028741(+) =JcCD0054283(-) =JcCB0942771(-) =JcCD0101489(+) =JcCB0023641(+) =JcCB0246121(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SUA2_RICCO 322 79.8 88.1 (tr|B9SUA2) Chorismate synthase OS=Ricinus communis GN=RCOM_0228160 PE=3 SV=1
Arabidopsis_pep AT1G48850.1 317 82.4 90.7 | Symbols: EMB1144 | EMB1144 (embryo defective 1144); chorismate synthase | chr1:18065154-18067956 REVERSE
soybean_pep Glyma10g35560.1 314 81.8 89.5  
Medicago_pep IMGA|Medtr1g121150.1 262 80.5 89.6 Chorismate synthase chr01_pseudomolecule_IMGAG_V3 26335762-26338001 E EGN_Mt090430 20090702
grape_pep GSVIVT01016288001 311 81.8 89.5  
castor_bean_cds 28327.m000358 480 87.6 87.6 Chorismate synthase, chloroplast precursor, putative
castor_bean_pep 28327.m000358 322 79.8 88.1 Chorismate synthase, chloroplast precursor, putative
JAT_13201ests gi|268521452|gb|FM894204.1|FM894204 172 97.1 97.1 FM894204 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_004503, mRNA sequence
KJC_r1 KJC_c09119 1007 98.2 98.2  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0028741.10 length: 193 aa.
IPR000453 Chorismate synthase
method AccNumber shortName E-value location
Molecular Function GO:0004107 chorismate synthase activity    
Biological Process GO:0009073 aromatic amino acid family biosynthetic process    
HMMPanther PTHR21085 CHORISMATE 8.7e-82 1-192
HMMPfam PF01264 Chorismate_synt 1.9e-60 1-162
superfamily SSF103263 Chorismate 8.4e-61 1-187
IPR020541 Chorismate synthase, conserved site
Molecular Function GO:0004107 chorismate synthase activity    
Biological Process GO:0009073 aromatic amino acid family biosynthetic process    
PatternScan PS00789 CHORISMATE_SYNTHASE_3 NA 136-152