Jatropha Genome Database

JcCA0027761.10 (JcS_103693.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0027761
Scaffold:
JcS_103693 JcCA0077471(+) =JcCA0027761(+) =JcCB0398651(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SLG6_RICCO 768 90.0 94.4 (tr|B9SLG6) Glutamate-1-semialdehyde 2,1-aminomutase, putative OS=Ricinus communis GN=RCOM_0686430 PE=3 SV=1
Arabidopsis_pep AT3G48730.1 711 82.7 90.3 | Symbols: GSA2 | GSA2 (glutamate-1-semialdehyde 2,1-aminomutase 2); catalytic/ glutamate-1-semialdehyde 2,1-aminomutase/ pyridoxal phosphate binding / transaminase | chr3:18049697-18051550 FORWARD
soybean_pep Glyma04g00420.1 734 85.4 92.0  
Medicago_pep IMGA|Medtr3g163620.1 735 84.9 92.2 Glutamate-1-semialdehyde-2,1-aminomutase; chr03_pseudomolecule_IMGAG_V3 43028839-43031897 E EGN_Mt090430 20090702
grape_pep GSVIVT01008589001 652 77.4 84.7  
castor_bean_cds 29728.m000832 1237 87.6 87.6 glutamate-1-semialdehyde 2,1-aminomutase, putative
castor_bean_pep 29728.m000832 768 90.0 94.4 glutamate-1-semialdehyde 2,1-aminomutase, putative
JAT_13201ests gi|268521501|gb|FM894253.1|FM894253 230 100.0 100.0 FM894253 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_004558, mRNA sequence
KJC_r1 KJC_c01173 1582 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0027761.10 length: 411 aa.
IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase
method AccNumber shortName E-value location
Biological Process GO:0033014 tetrapyrrole biosynthetic process    
Molecular Function GO:0042286 glutamate-1-semialdehyde 2,1-aminomutase activity    
HMMTigr TIGR00713 hemL: 7.9e-245 1-411
IPR005814 Aminotransferase class-III
Molecular Function GO:0008483 transaminase activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
HMMPanther PTHR11986 AMINOTRANSFERASE 4.5e-242 7-411
HMMPfam PF00202 Aminotran_3 3.5e-65 25-327
PatternScan PS00600 AA_TRANSFER_CLASS_3 NA 220-256
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 2.3e-77 55-303
IPR015424 Pyridoxal phosphate-dependent transferase, major domain
superfamily SSF53383 PLP-dependent 6.5e-125 1-411
no_ID  
HMMPanther PTHR11986:SF5 GLUTAMATE-1-SEMIALDEHYDE 4.5e-242 7-411
Seg seg seg NA 246-257