Jatropha Genome Database

JcCA0022221.30 (JcS_103177.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0022221
Scaffold:
JcS_103177 JcCA0022221(+) =JcCB0265951(+) =JcCB0095101(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RU62_RICCO 458 85.9 89.5 (tr|B9RU62) Cmp-2-keto-3-deoctulosonate (Cmp-kdo) cytidyltransferase, putative OS=Ricinus communis GN=RCOM_1632840 PE=3 SV=1
Arabidopsis_pep AT1G53000.1 451 83.3 88.3 | Symbols: | cytidylyltransferase family | chr1:19745330-19747133 REVERSE
soybean_pep Glyma12g23350.1 446 78.2 81.4  
Medicago_pep --No_Hits--        
grape_pep GSVIVT01014351001 448 83.6 89.1  
castor_bean_cds 30180.m001026 862 88.2 88.2 cmp-2-keto-3-deoctulosonate (cmp-kdo) cytidyltransferase, putative
castor_bean_pep 30180.m001026 458 85.9 89.5 cmp-2-keto-3-deoctulosonate (cmp-kdo) cytidyltransferase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0022221.30 length: 296 aa.
IPR003329 Acylneuraminate cytidylyltransferase
method AccNumber shortName E-value location
Biological Process GO:0009103 lipopolysaccharide biosynthetic process    
HMMPfam PF02348 CTP_transf_3 3.1e-53 53-262
IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase
Cellular Component GO:0005737 cytoplasm    
Molecular Function GO:0008690 3-deoxy-manno-octulosonate cytidylyltransferase activity    
Biological Process GO:0009103 lipopolysaccharide biosynthetic process    
HAMAP MF_00057 KDSB_MF_00057 36.716 49-291
HMMTigr TIGR00466 kdsB: 9.9e-80 48-284
no_ID  
Gene3D G3DSA:3.90.550.10 no description 2.8e-72 51-290
HMMPanther PTHR21485 CMP-N-ACETYLNEURAMINIC 3.7e-124 56-295
HMMPanther PTHR21485:SF4 CMP-2-KETO-3-DEOCTULOSONATE 3.7e-124 56-295
Seg seg seg NA 6-16
21-39
240-260
superfamily SSF53448 Nucleotide-diphospho-sugar 2e-57 50-294