Jatropha Genome Database

JcCA0020831.30 (JcS_109028.40)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0020831
Scaffold:
JcS_109028 JcCB0230371(-) =JcCA0020831(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9H5U1_POPTR 778 83.8 89.2 (tr|B9H5U1) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_831715 PE=3 SV=1
Arabidopsis_pep AT1G42970.1 724 78.8 84.8 | Symbols: GAPB | GAPB (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE B SUBUNIT); glyceraldehyde-3-phosphate dehydrogenase (NADP+)/ glyceraldehyde-3-phosphate dehydrogenase | chr1:16127552-16129584 FORWARD
soybean_pep Glyma06g01850.3 758 80.8 88.1  
Medicago_pep IMGA|Medtr3g160060.1 742 79.8 86.5 Protein of unknown function CP12; Glyceraldehyde-3-phosphate dehydrogenase, type I chr03_pseudomolecule_IMGAG_V3 42055909-42059863 F EGN_Mt090430 20090702
grape_pep GSVIVT01013403001 739 80.8 86.5  
castor_bean_cds 30170.m013796 1392 87.5 87.5 glyceraldehyde 3-phosphate dehydrogenase, putative
castor_bean_pep 30170.m013796 778 83.4 88.6 glyceraldehyde 3-phosphate dehydrogenase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c02737 2416 99.8 99.8  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0020831.30 length: 452 aa.
IPR000173 Glyceraldehyde 3-phosphate dehydrogenase subfamily
method AccNumber shortName E-value location
Molecular Function GO:0004365 glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity    
Biological Process GO:0006006 glucose metabolic process    
Molecular Function GO:0051287 NAD or NADH binding    
Biological Process GO:0055114 oxidation reduction    
HMMPanther PTHR10836 GLYCERALDEHYDE 5.4e-207 86-421
IPR003823 Protein of unknown function CP12
HMMPfam PF02672 CP12 2.3e-05 431-451
IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I
Biological Process GO:0006006 glucose metabolic process    
Molecular Function GO:0008943 glyceraldehyde-3-phosphate dehydrogenase activity    
Molecular Function GO:0051287 NAD or NADH binding    
Biological Process GO:0055114 oxidation reduction    
HMMTigr TIGR01534 GAPDH-I: 1.5e-193 87-413
IPR016040 NAD(P)-binding domain
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0005488 binding    
Biological Process GO:0008152 metabolic process    
superfamily SSF51735 NAD(P)-binding 2.3e-57 86-256
IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain
HMMPfam PF00044 Gp_dh_N 1.8e-53 87-239
HMMSmart SM00846 no description 9.4e-77 86-239
IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain
HMMPfam PF02800 Gp_dh_C 5.8e-67 244-401
IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site
PatternScan PS00071 GAPDH NA 237-244
IPR020832 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup
FPrintScan PR00078 G3PDHDRGNASE 4.2e-39 195-208
233-251
260-276
316-333
357-372
no_ID  
Gene3D G3DSA:3.30.360.10 no description 6e-69 237-403
Seg seg seg NA 273-290
321-335
superfamily SSF55347 Glyceraldehyde-3-phosphate 2.4e-71 239-402