| JcS_100624 | JcCB0479101(+) =JcCA0020472(-) =JcCB0175201(-) =JcCA0225051(-) =JcCB0095251(+) =JcCA0020761(-) |
| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | B9RFF4_RICCO | 1290 | 90.1 | 94.2 | (tr|B9RFF4) WD-repeat protein, putative OS=Ricinus communis GN=RCOM_1434170 PE=4 SV=1 |
| Arabidopsis_pep | AT5G27030.1 | 1058 | 75.8 | 84.7 | | Symbols: TPR3 | TPR3 (TOPLESS-RELATED 3) | chr5:9508913-9515263 REVERSE |
| soybean_pep | Glyma20g38230.1 | 1206 | 83.9 | 90.9 | |
| Medicago_pep | IMGA|Medtr7g138250.1 | 1205 | 84.6 | 90.7 | Lissencephaly type-1-like homology motif; CTLH, C-terminal to LisH motif; WD40-like chr07_pseudomolecule_IMGAG_V3 32758775-32750319 E EGN_Mt090430 20090702 |
| grape_pep | GSVIVT01031186001 | 1198 | 82.7 | 91.3 | |
| castor_bean_cds | 30128.m008872 | 2288 | 89.2 | 89.2 | WD-repeat protein, putative |
| castor_bean_pep | 30128.m008872 | 1290 | 90.1 | 94.2 | WD-repeat protein, putative |
| JAT_13201ests | --No_Hits-- | ||||
| KJC_r1 | KJC_c02482 | 2537 | 99.9 | 99.9 |
| JcCA0020761.10 | length: 684 aa. | |||
| IPR001680 | WD40 repeat | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| HMMSmart | SM00320 | no description | 2.6e+02 | 1-35 37-78 81-124 127-168 416-456 459-498 554-590 604-645 |
| IPR011046 | WD40 repeat-like-containing domain | |||
| superfamily | SSF50978 | WD40 | 1.1e-24 | 318-646 8-210 |
| IPR015943 | WD40/YVTN repeat-like-containing domain | |||
| Gene3D | G3DSA:2.130.10.10 | no description | 1.3e-25 | 1-216 384-645 |
| IPR017986 | WD40-repeat-containing domain | |||
| ProfileScan | PS50294 | WD_REPEATS_REGION | 15.188 | 136-177 423-507 |
| IPR019781 | WD40 repeat, subgroup | |||
| HMMPfam | PF00400 | WD40 | 2.7e-06 | 7-35 41-77 146-168 461-498 |
| IPR019782 | WD40 repeat 2 | |||
| ProfileScan | PS50082 | WD_REPEATS_2 | 13.416 | 146-177 466-507 |
| no_ID | ||||
| HMMPanther | PTHR19854 | TRANSDUCIN | 3.8e-11 | 405-601 |
| Seg | seg | seg | NA | 668-675 |