Jatropha Genome Database

JcCA0015401.20 (JcS_111223.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0015401
Scaffold:
JcS_111223 JcCB0683711(-) =JcCA0015401(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9RAZ6_RICCO 370 76.1 81.8 (tr|B9RAZ6) Protein phosphatase pp2a regulatory subunit B, putative OS=Ricinus communis GN=RCOM_1510290 PE=4 SV=1
Arabidopsis_pep AT1G17720.2 245 50.6 63.6 | Symbols: ATB BETA | ATB BETA; nucleotide binding / protein phosphatase type 2A regulator | chr1:6093949-6098065 REVERSE
soybean_pep Glyma04g35860.2 288 59.1 72.9  
Medicago_pep IMGA|Medtr2g121640.1 240 61.4 77.2 WD40-like chr02_pseudomolecule_IMGAG_V3 28903505-28910946 E EGN_Mt090430 20090702
grape_pep GSVIVT01007712001 325 64.8 77.3  
castor_bean_cds 30147.m013921 563 89.4 89.4 protein phosphatase pp2a regulatory subunit B, putative
castor_bean_pep 30147.m013921 370 76.1 81.8 protein phosphatase pp2a regulatory subunit B, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c04735 65.9 78.4 78.4  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0015401.20 length: 258 aa.
IPR000009 Protein phosphatase 2A, regulatory subunit PR55
method AccNumber shortName E-value location
Cellular Component GO:0000159 protein phosphatase type 2A complex    
Biological Process GO:0007165 signal transduction    
Molecular Function GO:0008601 protein phosphatase type 2A regulator activity    
FPrintScan PR00600 PP2APR55 2e-59 95-122
123-150
151-179
180-207
208-235
HMMPanther PTHR11871 PROTEIN 2.1e-94 85-258
IPR011046 WD40 repeat-like-containing domain
superfamily SSF50978 WD40 7.3e-12 81-258
IPR015943 WD40/YVTN repeat-like-containing domain
Gene3D G3DSA:2.130.10.10 no description 1.4e-05 93-254
no_ID  
Seg seg seg NA 98-106