| JcS_102588 | JcCB0735771(+) =JcCA0012121(+) =JcCB0983611(-) =JcCB0126091(-) |
| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | B9SC90_RICCO | 1195 | 81.7 | 87.5 | (tr|B9SC90) DNA polymerase OS=Ricinus communis GN=RCOM_1409950 PE=3 SV=1 |
| Arabidopsis_pep | AT5G67100.1 | 890 | 62.1 | 74.3 | | Symbols: ICU2 | ICU2 (INCURVATA2); DNA-directed DNA polymerase | chr5:26776994-26785104 FORWARD |
| soybean_pep | Glyma01g39430.1 | 966 | 66.6 | 75.7 | |
| Medicago_pep | IMGA|Medtr5g017000.1 | 865 | 72.5 | 80.0 | DNA-directed DNA polymerase B chr05_pseudomolecule_IMGAG_V3 6066040-6054333 E EGN_Mt090430 20090702 |
| grape_pep | GSVIVT01022113001 | 923 | 78.5 | 86.7 | |
| castor_bean_cds | 30115.m001231 | 1970 | 86.7 | 86.7 | DNA polymerase alpha catalytic subunit, putative |
| castor_bean_pep | 30115.m001231 | 1195 | 81.7 | 87.5 | DNA polymerase alpha catalytic subunit, putative |
| JAT_13201ests | --No_Hits-- | ||||
| KJC_r1 | --No_Hits-- |
| JcCA0012121.10 | length: 734 aa. | |||
| IPR006134 | DNA-directed DNA polymerase, family B, conserved region | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0000166 | nucleotide binding | ||
| Molecular Function | GO:0003677 | DNA binding | ||
| Molecular Function | GO:0003887 | DNA-directed DNA polymerase activity | ||
| Biological Process | GO:0006260 | DNA replication | ||
| HMMPfam | PF00136 | DNA_pol_B | 5.2e-117 | 31-503 |
| IPR006172 | DNA-directed DNA polymerase, family B | |||
| Molecular Function | GO:0000166 | nucleotide binding | ||
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| Molecular Function | GO:0003887 | DNA-directed DNA polymerase activity | ||
| Biological Process | GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | ||
| HMMPanther | PTHR10322 | DNA | 0 | 26-732 |
| HMMSmart | SM00486 | no description | 3.6e-14 | 2-265 |
| IPR015088 | Zinc finger, DNA-directed DNA polymerase, family B, alpha | |||
| Molecular Function | GO:0001882 | nucleoside binding | ||
| Molecular Function | GO:0003887 | DNA-directed DNA polymerase activity | ||
| Cellular Component | GO:0005634 | nucleus | ||
| Biological Process | GO:0006260 | DNA replication | ||
| HMMPfam | PF08996 | zf-DNA_Pol | 2e-43 | 525-730 |
| IPR017964 | DNA-directed DNA polymerase, family B, conserved site | |||
| Molecular Function | GO:0000166 | nucleotide binding | ||
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| Molecular Function | GO:0003887 | DNA-directed DNA polymerase activity | ||
| Biological Process | GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | ||
| PatternScan | PS00116 | DNA_POLYMERASE_B | NA | 253-261 |
| IPR017966 | DNA-directed DNA polymerase, family B, conserved region2 | |||
| FPrintScan | PR00106 | DNAPOLB | 2.5e-12 | 122-135 198-210 251-259 |
| no_ID | ||||
| Coil | coil | coiled-coil | NA | 279-300 |
| HMMPanther | PTHR10322:SF3 | DNA | 0 | 26-732 |
| Seg | seg | seg | NA | 81-95 97-102 296-313 509-520 |
| superfamily | SSF56672 | DNA/RNA | 2e-121 | 30-497 |