Jatropha Genome Database
- JcSR152930r.10
BLASTP 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcSR152930r.10 + phase: 2 /TE/partial
(124 letters)
Database: trembl
11,636,205 sequences; 3,746,823,912 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
B9T188_RICCO (tr|B9T188) Putative uncharacterized protein OS=Ric... 80 9e-14
B9RFV9_RICCO (tr|B9RFV9) Putative uncharacterized protein OS=Ric... 77 6e-13
B9SZ30_RICCO (tr|B9SZ30) Putative uncharacterized protein OS=Ric... 74 4e-12
B9T0J0_RICCO (tr|B9T0J0) Putative uncharacterized protein OS=Ric... 72 2e-11
B9SEF6_RICCO (tr|B9SEF6) Putative uncharacterized protein OS=Ric... 66 1e-09
A5B0T8_VITVI (tr|A5B0T8) Putative uncharacterized protein OS=Vit... 65 2e-09
A5BH98_VITVI (tr|A5BH98) Putative uncharacterized protein OS=Vit... 65 2e-09
B9SUM0_RICCO (tr|B9SUM0) Putative uncharacterized protein OS=Ric... 60 5e-08
B9T218_RICCO (tr|B9T218) Putative uncharacterized protein OS=Ric... 60 6e-08
Q7Y193_ORYSJ (tr|Q7Y193) Putative reverse transcriptase OS=Oryza... 57 7e-07
Q60DM2_ORYSJ (tr|Q60DM2) F-box domain containing protein OS=Oryz... 56 1e-06
B8AP27_ORYSI (tr|B8AP27) Putative uncharacterized protein OS=Ory... 56 1e-06
Q9FW98_ORYSJ (tr|Q9FW98) Putative non-LTR retroelement reverse t... 56 1e-06
Q7XCU0_ORYSJ (tr|Q7XCU0) Putative uncharacterized protein OS=Ory... 56 1e-06
B9FA69_ORYSJ (tr|B9FA69) Putative uncharacterized protein OS=Ory... 56 1e-06
A2YJD5_ORYSI (tr|A2YJD5) Putative uncharacterized protein OS=Ory... 55 3e-06
B9RW14_RICCO (tr|B9RW14) Putative uncharacterized protein OS=Ric... 54 4e-06
A2Q2M9_MEDTR (tr|A2Q2M9) Polynucleotidyl transferase, Ribonuclea... 54 7e-06
>B9T188_RICCO (tr|B9T188) Putative uncharacterized protein OS=Ricinus communis
GN=RCOM_0495440 PE=4 SV=1
Length = 273
Score = 79.7 bits (195), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%)
Query: 4 GSFIKAVSGYSSGLCSPRVAETIAMREVLSWLRSLHLGLTIIETDCLQLVNAVQGGSLDY 63
G+F A +G SG P+VAE +++RE L W++ L L + E+DCL LVNAV ++
Sbjct: 163 GTFRAATNGLISGPLDPQVAEALSLREDLCWVKGLDLNYVVSESDCLTLVNAVNKVGVNS 222
Query: 64 SDWSLVLGDIKHFISQSSDISIAWVKRHANQPAHSLARAA 103
S + L++GD + F+ + + I +VKR N+ AH LAR
Sbjct: 223 SLFGLLIGDCRSFLKEMNHAHIVFVKRFGNRVAHLLARVT 262
>B9RFV9_RICCO (tr|B9RFV9) Putative uncharacterized protein OS=Ricinus communis
GN=RCOM_1437560 PE=4 SV=1
Length = 223
Score = 77.0 bits (188), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 69/120 (57%)
Query: 1 DHRGSFIKAVSGYSSGLCSPRVAETIAMREVLSWLRSLHLGLTIIETDCLQLVNAVQGGS 60
D G+F+ ++ GL PR+AE +A++E + W + L + E+D V+A++ +
Sbjct: 93 DSNGTFVACMAHAVLGLFEPRLAEAVALKEAIRWAIQMRFSLVVFESDSKIAVDAIRSLA 152
Query: 61 LDYSDWSLVLGDIKHFISQSSDISIAWVKRHANQPAHSLARAACYFASFCVWDMIPDFIQ 120
D+S++ +++ + + +S + + +VKR AN AH LA ++ +AS W++IP ++
Sbjct: 153 ADWSEFGIIIDECRSLLSLGLNFQVYFVKRQANMVAHVLAMSSYSYASLATWNVIPSCVE 212
>B9SZ30_RICCO (tr|B9SZ30) Putative uncharacterized protein OS=Ricinus communis
GN=RCOM_0494170 PE=4 SV=1
Length = 329
Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 68/129 (52%), Gaps = 8/129 (6%)
Query: 1 DHRGSFIKAVSGYSSGLCSPRVAETIAMREVLSWLRSLHLGLTIIETDCLQLVNAVQGGS 60
D GSF+ G S GL + ++AE I +RE + W+ SL I E D +V+AV G+
Sbjct: 199 DSAGSFVMGADGSSPGLFNVKLAEAIGLREAVQWVLSLGRSNVIFEYDAKVVVDAVLSGA 258
Query: 61 LDYSDWSLVLGDIKHFISQSSDISIAWVKRHANQPAHSLARAACYFASF--------CVW 112
D ++ V+ D + + + S+ ++++ AN AHSLARA+ F C+
Sbjct: 259 ADLFEFGAVIADCRLLLQHGCNYSVQFIRKQANLVAHSLARASHLQDGFNMFSVPPDCIR 318
Query: 113 DMIPDFIQY 121
+++P F+ +
Sbjct: 319 NLVPPFVPF 327
>B9T0J0_RICCO (tr|B9T0J0) Putative uncharacterized protein OS=Ricinus communis
GN=RCOM_0301860 PE=4 SV=1
Length = 163
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 57/103 (55%)
Query: 1 DHRGSFIKAVSGYSSGLCSPRVAETIAMREVLSWLRSLHLGLTIIETDCLQLVNAVQGGS 60
DH G F+ A++ +G P +AE +A++E LSW R L + E DCL +V A+
Sbjct: 59 DHAGLFVCAMAVSFAGAYIPEIAEGLAIQEALSWARDRQLLNVVFELDCLHIVEALLRKG 118
Query: 61 LDYSDWSLVLGDIKHFISQSSDISIAWVKRHANQPAHSLARAA 103
D S L++ D K S S+ S A+VKR N+ AH LAR +
Sbjct: 119 TDRSSLGLIIKDCKLLSSSISNCSFAFVKRSRNEVAHKLARVS 161
>B9SEF6_RICCO (tr|B9SEF6) Putative uncharacterized protein OS=Ricinus communis
GN=RCOM_0703970 PE=4 SV=1
Length = 304
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 61/119 (51%)
Query: 1 DHRGSFIKAVSGYSSGLCSPRVAETIAMREVLSWLRSLHLGLTIIETDCLQLVNAVQGGS 60
D FIK + + SG+ + E I +RE L+W L L I + D +V+ +Q S
Sbjct: 174 DSASRFIKGSTRWFSGIWEVKEVECIVLREPLNWDVLLELQNVIFDVDAEAVVDVIQSRS 233
Query: 61 LDYSDWSLVLGDIKHFISQSSDISIAWVKRHANQPAHSLARAACYFASFCVWDMIPDFI 119
D S++ + + D F++ + + +VK+ AN AH LARA+ F S W+ P F+
Sbjct: 234 SDVSEFGVFIKDCLSFLADNLSFQVWFVKQQANVVAHKLARASHLFGSGVDWEEPPSFV 292
>A5B0T8_VITVI (tr|A5B0T8) Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_024672 PE=4 SV=1
Length = 1413
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%)
Query: 22 VAETIAMREVLSWLRSLHLGLTIIETDCLQLVNAVQGGSLDYSDWSLVLGDIKHFISQSS 81
V E + +REVLSW+ ++E DCL++V A+Q S + + ++ D +
Sbjct: 1307 VVEALGVREVLSWIHERSRSRIVVEIDCLRVVQAIQHKSCPNTSFGFIIADCLDVLQHLV 1366
Query: 82 DISIAWVKRHANQPAHSLARAACYFASFCVWDMIP 116
D+ + + +R AN AH LA+ A F S +W P
Sbjct: 1367 DVQVVYARRSANSAAHCLAKGAGSFTSLHIWGYTP 1401
>A5BH98_VITVI (tr|A5BH98) Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_005356 PE=4 SV=1
Length = 1793
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%)
Query: 22 VAETIAMREVLSWLRSLHLGLTIIETDCLQLVNAVQGGSLDYSDWSLVLGDIKHFISQSS 81
V E + +REVLSW+ ++ETDCL +V A+Q S + ++ D +
Sbjct: 1687 VVEALGVREVLSWIHERSRSRIVVETDCLLVVQAIQHKSCPNMSFGFIIADCLDVLQHLV 1746
Query: 82 DISIAWVKRHANQPAHSLARAACYFASFCVWDMIP 116
D+ + + +R AN AH LA+ A F S +W P
Sbjct: 1747 DVQVVYARRSANSAAHCLAKGAGSFTSLHIWGYTP 1781
>B9SUM0_RICCO (tr|B9SUM0) Putative uncharacterized protein OS=Ricinus communis
GN=RCOM_0999080 PE=4 SV=1
Length = 119
Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 16 GLCSPRVAETIAMREVLSWLRSLHLGLTIIETDCLQLVNAVQGGSLDYSDWSLVLGDIKH 75
G +PR AE I++RE LSWL+ IIE+D LQ++ A++ S S + L++ D KH
Sbjct: 11 GNYTPREAEAISIREALSWLKQQIFEECIIESDALQVIEALKAPS-SQSCFHLIIDDCKH 69
Query: 76 FISQSSDISIAWVKRHANQPAHSLARAA 103
+ + +V+R AN A +AR A
Sbjct: 70 LVQHFRQVHFQFVRRSANTAAQIVARGA 97
>B9T218_RICCO (tr|B9T218) Putative uncharacterized protein OS=Ricinus communis
GN=RCOM_0549770 PE=4 SV=1
Length = 346
Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 58/114 (50%)
Query: 6 FIKAVSGYSSGLCSPRVAETIAMREVLSWLRSLHLGLTIIETDCLQLVNAVQGGSLDYSD 65
F+ S GL R +ET+ +RE LSW+R I E DC Q+V+AV +
Sbjct: 222 FMCCASNCYEGLVQVRESETMRLREALSWIRGKWYQRVIFELDCQQIVHAVTNFLASVDE 281
Query: 66 WSLVLGDIKHFISQSSDISIAWVKRHANQPAHSLARAACYFASFCVWDMIPDFI 119
+ ++ + +++++ S+ +VKR AN+ A+ LARA A V P FI
Sbjct: 282 FGSLIRECAELLAENNSYSVIFVKRQANEIAYMLARAPHSHAGLRVCFEPPTFI 335
>Q7Y193_ORYSJ (tr|Q7Y193) Putative reverse transcriptase OS=Oryza sativa subsp.
japonica GN=OSJNBa0039O18.22 PE=4 SV=1
Length = 404
Score = 56.6 bits (135), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 56/120 (46%)
Query: 1 DHRGSFIKAVSGYSSGLCSPRVAETIAMREVLSWLRSLHLGLTIIETDCLQLVNAVQGGS 60
D+ G + A S S + P +AE +A+R L + L ++ +DCL ++ +Q
Sbjct: 277 DNTGKCLVACSEMISDVVLPELAEALAIRRALGLAKEEGLQHIVMASDCLTVIRRIQTSG 336
Query: 61 LDYSDWSLVLGDIKHFISQSSDISIAWVKRHANQPAHSLARAACYFASFCVWDMIPDFIQ 120
D S V+ DIK S S V R +N AHSLAR A +IPD+I+
Sbjct: 337 RDRSGVGCVIEDIKKLASTFVLCSFMHVNRLSNLAAHSLARNAELSTCTVYRSVIPDYIR 396
>Q60DM2_ORYSJ (tr|Q60DM2) F-box domain containing protein OS=Oryza sativa subsp.
japonica GN=OSJNBb0036M02.9 PE=4 SV=1
Length = 855
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 56/120 (46%)
Query: 1 DHRGSFIKAVSGYSSGLCSPRVAETIAMREVLSWLRSLHLGLTIIETDCLQLVNAVQGGS 60
D+ G + A S S + P +AE +A+R L + L ++ +DCL ++ +Q
Sbjct: 728 DNTGKCLVACSEMISDVVLPELAEALAIRRALGLAKEEGLQHIVMASDCLTVIRRIQTSG 787
Query: 61 LDYSDWSLVLGDIKHFISQSSDISIAWVKRHANQPAHSLARAACYFASFCVWDMIPDFIQ 120
D S V+ DIK S S V R +N AHSLAR A +IPD+I+
Sbjct: 788 RDRSGVGCVIEDIKKLASTFVLCSFMHVNRLSNLAAHSLARNAELSTCTVYRSVIPDYIR 847
>B8AP27_ORYSI (tr|B8AP27) Putative uncharacterized protein OS=Oryza sativa subsp.
indica GN=OsI_12930 PE=4 SV=1
Length = 834
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 56/120 (46%)
Query: 1 DHRGSFIKAVSGYSSGLCSPRVAETIAMREVLSWLRSLHLGLTIIETDCLQLVNAVQGGS 60
D+ G + A S S + P +AE +A+R L + L ++ +DCL ++ +Q
Sbjct: 707 DNTGKCLVACSEMISDVVLPELAEALAIRRALGLAKEEGLQHIVMASDCLTVIRRIQTSG 766
Query: 61 LDYSDWSLVLGDIKHFISQSSDISIAWVKRHANQPAHSLARAACYFASFCVWDMIPDFIQ 120
D S V+ DIK S S V R +N AHSLAR A +IPD+I+
Sbjct: 767 RDRSGVGCVIEDIKKLASTFVLCSFMHVNRLSNLAAHSLARNAELSTCTVYRSVIPDYIR 826
>Q9FW98_ORYSJ (tr|Q9FW98) Putative non-LTR retroelement reverse transcriptase
OS=Oryza sativa subsp. japonica GN=OSJNBa0026L12.31 PE=4
SV=1
Length = 1382
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 56/120 (46%)
Query: 1 DHRGSFIKAVSGYSSGLCSPRVAETIAMREVLSWLRSLHLGLTIIETDCLQLVNAVQGGS 60
D+ G + A S S + P +AE +A+R L + L ++ +DCL ++ +Q
Sbjct: 1255 DNTGKCLVACSEMISDVVLPELAEALAIRRALGLAKEEGLEHIVMASDCLTVIRRIQTSG 1314
Query: 61 LDYSDWSLVLGDIKHFISQSSDISIAWVKRHANQPAHSLARAACYFASFCVWDMIPDFIQ 120
D S V+ DIK S S V R +N AHSLAR A +IPD+I+
Sbjct: 1315 RDRSGVGCVIEDIKKLASTFVLCSFMHVNRLSNLAAHSLARNAELSTCTVYRSVIPDYIR 1374
>Q7XCU0_ORYSJ (tr|Q7XCU0) Putative uncharacterized protein OS=Oryza sativa subsp.
japonica GN=LOC_Os10g37170 PE=4 SV=2
Length = 1339
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 56/120 (46%)
Query: 1 DHRGSFIKAVSGYSSGLCSPRVAETIAMREVLSWLRSLHLGLTIIETDCLQLVNAVQGGS 60
D+ G + A S S + P +AE +A+R L + L ++ +DCL ++ +Q
Sbjct: 1212 DNTGKCLVACSEMISDVVLPELAEALAIRRALGLAKEEGLEHIVMASDCLTVIRRIQTSG 1271
Query: 61 LDYSDWSLVLGDIKHFISQSSDISIAWVKRHANQPAHSLARAACYFASFCVWDMIPDFIQ 120
D S V+ DIK S S V R +N AHSLAR A +IPD+I+
Sbjct: 1272 RDRSGVGCVIEDIKKLASTFVLCSFMHVNRLSNLAAHSLARNAELSTCTVYRSVIPDYIR 1331
>B9FA69_ORYSJ (tr|B9FA69) Putative uncharacterized protein OS=Oryza sativa subsp.
japonica GN=OsJ_12023 PE=4 SV=1
Length = 1145
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 56/120 (46%)
Query: 1 DHRGSFIKAVSGYSSGLCSPRVAETIAMREVLSWLRSLHLGLTIIETDCLQLVNAVQGGS 60
D+ G + A S S + P +AE +A+R L + L ++ +DCL ++ +Q
Sbjct: 1018 DNTGKCLVACSEMISDVVLPELAEALAIRRALGLAKEEGLQHIVMASDCLTVIRRIQTSG 1077
Query: 61 LDYSDWSLVLGDIKHFISQSSDISIAWVKRHANQPAHSLARAACYFASFCVWDMIPDFIQ 120
D S V+ DIK S S V R +N AHSLAR A +IPD+I+
Sbjct: 1078 RDRSGVGCVIEDIKKLASTFVLCSFMHVNRLSNLAAHSLARNAELSTCTVYRSVIPDYIR 1137
>A2YJD5_ORYSI (tr|A2YJD5) Putative uncharacterized protein OS=Oryza sativa subsp.
indica GN=OsI_25347 PE=4 SV=1
Length = 858
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%)
Query: 23 AETIAMREVLSWLRSLHLGLTIIETDCLQLVNAVQGGSLDYSDWSLVLGDIKHFISQSSD 82
AE +A R+ L+ + L +IE+DCLQ + +Q + SD + ++ +IKH ++ + D
Sbjct: 754 AELLACRDGLTLVLQWTLLPIVIESDCLQAIQLIQSKEEERSDLAFLIREIKHLMAGNRD 813
Query: 83 ISIAWVKRHANQPAHSLARAACYFASFCVW 112
I I + R+ N +H+LA C A W
Sbjct: 814 IVIMKIHRNQNSVSHALAYKGCSEALTAFW 843
>B9RW14_RICCO (tr|B9RW14) Putative uncharacterized protein OS=Ricinus communis
GN=RCOM_1175390 PE=4 SV=1
Length = 276
Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 21 RVAETIAMREVLSWLRSLHLGLTIIETDCLQLVNAVQGGSLDYSDWSLVLGDIKHFISQS 80
R+AE ++E LSW+ L IIE+D ++++ + D S++ ++ + S
Sbjct: 171 RLAEAPFLKETLSWICEQSLANVIIESDAKMVIDSFHQFAFDISEFGCLVNTFRSIASFC 230
Query: 81 SDISIAWVKRHANQPAHSLARAACYFASFCVWDMIPDFIQ 120
++ + +VKR AN ++A+AA AS VW PDFI+
Sbjct: 231 VNVRVVFVKRQAN----AIAKAAHSNASLMVWQEAPDFIR 266
>A2Q2M9_MEDTR (tr|A2Q2M9) Polynucleotidyl transferase, Ribonuclease H fold
OS=Medicago truncatula GN=MtrDRAFT_AC151521g56v2 PE=4
SV=1
Length = 266
Score = 53.5 bits (127), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 61/121 (50%)
Query: 1 DHRGSFIKAVSGYSSGLCSPRVAETIAMREVLSWLRSLHLGLTIIETDCLQLVNAVQGGS 60
D RG FI+A + + + E +A+ E + + + E+D LV A+
Sbjct: 139 DSRGQFIRAQTKWQRANMTVLEGEAVALLEAIHSADANRWNRVVFESDSSTLVQALSSPG 198
Query: 61 LDYSDWSLVLGDIKHFISQSSDISIAWVKRHANQPAHSLARAACYFASFCVWDMIPDFIQ 120
S++S ++ I + +S S+ + +V+R AN AH+LARA C +AS ++ P I+
Sbjct: 199 HGDSEFSAIVSSIIYQLSLHSNFEVKFVRRQANMVAHTLARADCSWASHRIFYSYPFCIE 258
Query: 121 Y 121
+
Sbjct: 259 H 259