Jatropha Genome Database

JcPR02JBVLC.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcPR02JBVLC.10 - phase: 2 /pseudo/partial
         (55 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9I3A9_POPTR (tr|B9I3A9) Predicted protein OS=Populus trichocarp...    59   2e-07
D7MAQ9_ARALY (tr|D7MAQ9) ATPANK2 OS=Arabidopsis lyrata subsp. ly...    59   2e-07
Q2V3C9_ARATH (tr|Q2V3C9) Putative uncharacterized protein At4g32...    58   3e-07
D7SHQ9_VITVI (tr|D7SHQ9) Whole genome shotgun sequence of line P...    57   8e-07
B9RB16_RICCO (tr|B9RB16) Pantothenate kinase, putative OS=Ricinu...    57   8e-07
B9IES4_POPTR (tr|B9IES4) Predicted protein OS=Populus trichocarp...    57   9e-07

>B9I3A9_POPTR (tr|B9I3A9) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_570098 PE=4 SV=1
          Length = 939

 Score = 58.5 bits (140), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/44 (65%), Positives = 31/44 (70%)

Query: 1   LMEEPAAYGKLGLANXXXXXXXXXXXFQFVDAYRSIKQRXSQFS 44
           LMEEPAAYGKLGLAN           FQFVDAYRSIKQR ++ S
Sbjct: 632 LMEEPAAYGKLGLANLLELREECLREFQFVDAYRSIKQRENEAS 675


>D7MAQ9_ARALY (tr|D7MAQ9) ATPANK2 OS=Arabidopsis lyrata subsp. lyrata
           GN=ARALYDRAFT_491515 PE=4 SV=1
          Length = 902

 Score = 58.5 bits (140), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/44 (65%), Positives = 31/44 (70%)

Query: 1   LMEEPAAYGKLGLANXXXXXXXXXXXFQFVDAYRSIKQRXSQFS 44
           LMEEPAAYGKLGLAN           FQFVDAYRSIKQR ++ S
Sbjct: 594 LMEEPAAYGKLGLANLLELREECLREFQFVDAYRSIKQRENEAS 637


>Q2V3C9_ARATH (tr|Q2V3C9) Putative uncharacterized protein At4g32180.2
           OS=Arabidopsis thaliana GN=At4g32180 PE=4 SV=1
          Length = 783

 Score = 58.2 bits (139), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/44 (65%), Positives = 31/44 (70%)

Query: 1   LMEEPAAYGKLGLANXXXXXXXXXXXFQFVDAYRSIKQRXSQFS 44
           LMEEPAAYGKLGLAN           FQFVDAYRSIKQR ++ S
Sbjct: 593 LMEEPAAYGKLGLANLLELREECLREFQFVDAYRSIKQRENEAS 636


>D7SHQ9_VITVI (tr|D7SHQ9) Whole genome shotgun sequence of line PN40024,
           scaffold_0.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00007735001 PE=4 SV=1
          Length = 988

 Score = 56.6 bits (135), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 28/44 (63%), Positives = 30/44 (68%)

Query: 1   LMEEPAAYGKLGLANXXXXXXXXXXXFQFVDAYRSIKQRXSQFS 44
           LMEEPAAYGKLGLAN           F FVDAYRSIKQR ++ S
Sbjct: 681 LMEEPAAYGKLGLANLLELREECLREFHFVDAYRSIKQRENEAS 724


>B9RB16_RICCO (tr|B9RB16) Pantothenate kinase, putative OS=Ricinus communis
           GN=RCOM_1510490 PE=4 SV=1
          Length = 907

 Score = 56.6 bits (135), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 28/44 (63%), Positives = 30/44 (68%)

Query: 1   LMEEPAAYGKLGLANXXXXXXXXXXXFQFVDAYRSIKQRXSQFS 44
           LMEEPAAYGKLGLAN           F FVDAYRSIKQR ++ S
Sbjct: 600 LMEEPAAYGKLGLANLLELREECLREFHFVDAYRSIKQRENEAS 643


>B9IES4_POPTR (tr|B9IES4) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_824671 PE=4 SV=1
          Length = 872

 Score = 56.6 bits (135), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 28/44 (63%), Positives = 30/44 (68%)

Query: 1   LMEEPAAYGKLGLANXXXXXXXXXXXFQFVDAYRSIKQRXSQFS 44
           LMEEPAAYGKLGLAN           FQFVD YRSIKQR ++ S
Sbjct: 565 LMEEPAAYGKLGLANLLELREECLREFQFVDVYRSIKQRENEAS 608