Jatropha Genome Database

JcCD0062698.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCD0062698.10 + phase: 0 /partial
         (144 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9TB47_RICCO (tr|B9TB47) Putative uncharacterized protein OS=Ric...   209   8e-53
B9IBN5_POPTR (tr|B9IBN5) Predicted protein OS=Populus trichocarp...   181   2e-44
B9R6V9_RICCO (tr|B9R6V9) Putative uncharacterized protein OS=Ric...   170   5e-41
B9GNL9_POPTR (tr|B9GNL9) Predicted protein OS=Populus trichocarp...   162   1e-38
C8YZB0_CAPAN (tr|C8YZB0) UPA17 OS=Capsicum annuum PE=2 SV=1           114   2e-24
A5CAY7_VITVI (tr|A5CAY7) Putative uncharacterized protein OS=Vit...    88   4e-16
B9IBM4_POPTR (tr|B9IBM4) Predicted protein OS=Populus trichocarp...    87   4e-16
D7TRE5_VITVI (tr|D7TRE5) Whole genome shotgun sequence of line P...    87   5e-16

>B9TB47_RICCO (tr|B9TB47) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_2029190 PE=4 SV=1
          Length = 352

 Score =  209 bits (532), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 103/144 (71%), Positives = 116/144 (80%)

Query: 1   MFLDQEKVGERLHDSPSLSMLSSNIDMKSKENTFFISKGCSQIEFGLVXXXXXXXXXXXX 60
           +FL++EKVGERL DSP LSML+S +D+KSKE+ F +SK  SQIEFGLV            
Sbjct: 77  IFLNKEKVGERLQDSPGLSMLTSQVDLKSKESPFLVSKESSQIEFGLVNSDSLLNPSQNS 136

Query: 61  XXXXXCRNFGSSQDLTDQETVSQHSVRQFIDDWPKSQSDKSSVSWPQLDVQSDRTQLSIS 120
                CRNFGSSQDLTDQ+TVSQHSVRQF+DDWPKSQSD+S+VSWPQLDVQSDRTQLSIS
Sbjct: 137 SPLISCRNFGSSQDLTDQDTVSQHSVRQFMDDWPKSQSDRSAVSWPQLDVQSDRTQLSIS 196

Query: 121 IPTIAHTDYMSSTSSPNNERVTLS 144
           IP   H DYMSSTSSPNNE+VTLS
Sbjct: 197 IPIGHHADYMSSTSSPNNEKVTLS 220


>B9IBN5_POPTR (tr|B9IBN5) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_663705 PE=4 SV=1
          Length = 286

 Score =  181 bits (459), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 97/150 (64%), Positives = 113/150 (75%), Gaps = 7/150 (4%)

Query: 1   MFLDQEKVGERLHDSPSLSMLSSNIDMKSKENTFFISK-----GCS-QIEFGLVXXXXXX 54
           MFL +E VGER  D+ +LSML SN+D+KSKE  FFISK     G S + EFGLV      
Sbjct: 1   MFLTKENVGERTQDATALSMLRSNMDLKSKETPFFISKQQNSYGESLRNEFGLVTSDSLL 60

Query: 55  XXXXXXXXXXXCRNFGSSQDLTDQETVSQHSVRQFIDDWPKSQSDKSSVSWPQLDVQSDR 114
                      CRNFGSSQDLTDQE+VSQHS+RQF+DDWPKSQSD+S+VSWP+LD QS+R
Sbjct: 61  NHSQKSSSLMSCRNFGSSQDLTDQESVSQHSLRQFMDDWPKSQSDRSAVSWPELDQQSER 120

Query: 115 TQLSISIPTIAHTDYMSSTSSPNNERVTLS 144
           TQLSISIP +A  D+MSSTSSPNNE+VTLS
Sbjct: 121 TQLSISIP-MAPADFMSSTSSPNNEKVTLS 149


>B9R6V9_RICCO (tr|B9R6V9) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_1586340 PE=4 SV=1
          Length = 617

 Score =  170 bits (430), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 94/148 (63%), Positives = 106/148 (71%), Gaps = 5/148 (3%)

Query: 1   MFLDQEKVGERLHDSPSLSMLSSNIDMKSKENTFFISKG----CSQIEFGLVXXXXXXXX 56
           M L++E +GERL DSPSLSM SS I +KSKEN FFISK      SQIEFG V        
Sbjct: 338 MILNKENLGERLQDSPSLSMQSSKIYLKSKENPFFISKHPYQESSQIEFGHVNFDSLLNP 397

Query: 57  XXXXXXXXXCRNFGSSQDLTDQETVSQHSVRQFIDDWPKSQSDKSSVSWPQLDVQSDRTQ 116
                    CRNF SSQD++ QET+SQHS RQF+DDWPKSQSD+SSVSWPQLDVQSDRTQ
Sbjct: 398 SQNSSSLISCRNFASSQDMSGQETISQHSFRQFMDDWPKSQSDQSSVSWPQLDVQSDRTQ 457

Query: 117 LSISIPTIAHTDYMSSTSSPNNERVTLS 144
           LSISIP    TD+ SSTSSP+NE   +S
Sbjct: 458 LSISIPNDP-TDFKSSTSSPSNEIFAVS 484


>B9GNL9_POPTR (tr|B9GNL9) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_551755 PE=4 SV=1
          Length = 605

 Score =  162 bits (410), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 89/150 (59%), Positives = 108/150 (72%), Gaps = 7/150 (4%)

Query: 1   MFLDQEKVGERLHDSPSLSMLSSNIDMKSKENTFFISK-----GCS-QIEFGLVXXXXXX 54
           +FL  E VGER+ D+  LSML S+ID+KSKE  FFISK     G S Q EF LV      
Sbjct: 323 VFLATENVGERMQDASGLSMLPSSIDLKSKETPFFISKQQNSYGESLQNEFALVTSDSLL 382

Query: 55  XXXXXXXXXXXCRNFGSSQDLTDQETVSQHSVRQFIDDWPKSQSDKSSVSWPQLDVQSDR 114
                      CRNFGSSQDLTDQE+VSQHS+RQF+DD PKS SD+S+V+WP LD+QS+R
Sbjct: 383 NHSQKSSSLMSCRNFGSSQDLTDQESVSQHSLRQFMDDCPKSHSDRSAVAWPGLDLQSER 442

Query: 115 TQLSISIPTIAHTDYMSSTSSPNNERVTLS 144
           TQLSISIP +A  D++SSTSS NNE+++LS
Sbjct: 443 TQLSISIP-MAPADFVSSTSSSNNEKISLS 471


>C8YZB0_CAPAN (tr|C8YZB0) UPA17 OS=Capsicum annuum PE=2 SV=1
          Length = 596

 Score =  114 bits (286), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/146 (43%), Positives = 94/146 (64%), Gaps = 7/146 (4%)

Query: 2   FLDQEKVGERLHDSPSLSMLSSNID--MKSKENTFFISKGCSQIEFGLVXXXXXXXXXXX 59
           +  +E  GER  D    +++S ++      ++N + ++   S+ EFGLV           
Sbjct: 323 YTAKENFGERYSDMKGSTIVSPSVKEPQYKEQNLYGVT---SRAEFGLVCADSLINPLNK 379

Query: 60  XXXXXXCRNFGSSQDLTDQETVSQH-SVRQFIDDWPKSQSDKSSVSWPQLDVQSDRTQLS 118
                 CR FG+S +++DQE+ SQH  +RQF+DDWPK+QSD+S+VSWP +D+QSD TQLS
Sbjct: 380 KSSLVNCRGFGNSDNISDQESKSQHHPLRQFMDDWPKNQSDQSNVSWPDIDLQSDPTQLS 439

Query: 119 ISIPTIAHTDYMSSTSSPNNERVTLS 144
           ISIP +  +D+MSSTSSP N+++T S
Sbjct: 440 ISIPVVT-SDFMSSTSSPANDKLTAS 464


>A5CAY7_VITVI (tr|A5CAY7) Putative uncharacterized protein OS=Vitis vinifera
           GN=VITISV_018459 PE=4 SV=1
          Length = 497

 Score = 87.8 bits (216), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 60/140 (42%), Positives = 82/140 (58%), Gaps = 9/140 (6%)

Query: 11  RLHDSPSLSMLSSNIDMKSKENTFFISK------GCSQIEFGLVXXXXXXXXXXXXXXXX 64
           RL +   LSM+S  ID+KS++  F ISK         Q EFG V                
Sbjct: 228 RLQEPQGLSMISPTIDLKSRDTPFSISKLPIPFEESPQSEFGFVSSDSLLNPSERGSYMN 287

Query: 65  XCRNFGSSQDLTDQETVSQHSVRQFIDDWPKSQSDKSSVSWPQLDVQSDRTQLSISIPTI 124
             RN+    D +DQET  QH  RQFIDDWPK QS++S ++WP+ +++SD TQLSISIP +
Sbjct: 288 S-RNYTPFLDFSDQETQDQHPFRQFIDDWPKDQSNRSDIAWPE-ELKSDWTQLSISIP-M 344

Query: 125 AHTDYMSSTSSPNNERVTLS 144
           + +D+ SS+SSP  E++  S
Sbjct: 345 SSSDFSSSSSSPTQEKLAFS 364


>B9IBM4_POPTR (tr|B9IBM4) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_774124 PE=4 SV=1
          Length = 607

 Score = 87.4 bits (215), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/140 (42%), Positives = 86/140 (61%), Gaps = 9/140 (6%)

Query: 11  RLHDSPSLSMLSSNIDMKSKENTFFISKG------CSQIEFGLVXXXXXXXXXXXXXXXX 64
           R  D+ S+SM+SS I+ KS E++FF+ K       CSQ EFG V                
Sbjct: 338 RAQDAQSISMMSSTINRKSDESSFFVPKQDILMEQCSQTEFGFVSSDSLLNPSQKSSYIN 397

Query: 65  XCRNFGSSQDLTDQETVSQHSVRQFIDDWPKSQSDKSSVSWPQLDVQSDRTQLSISIPTI 124
             + + S  +  D+E+  QH +RQFID+WPK QS+ S +SWP+ +++SD TQLS+SIP +
Sbjct: 398 S-KPYESFLNFNDEESQDQHPLRQFIDEWPKDQSNCSVISWPE-ELKSDWTQLSMSIP-M 454

Query: 125 AHTDYMSSTSSPNNERVTLS 144
           A +D+ SS+SSP  E++ LS
Sbjct: 455 ASSDFSSSSSSPTQEKLALS 474


>D7TRE5_VITVI (tr|D7TRE5) Whole genome shotgun sequence of line PN40024,
           scaffold_494.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00007165001 PE=4 SV=1
          Length = 558

 Score = 87.4 bits (215), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 59/140 (42%), Positives = 82/140 (58%), Gaps = 9/140 (6%)

Query: 11  RLHDSPSLSMLSSNIDMKSKENTFFISK------GCSQIEFGLVXXXXXXXXXXXXXXXX 64
           RL +   LSM+S  +D+KS++  F ISK         Q EFG V                
Sbjct: 339 RLQEPQGLSMISPTVDLKSRDTPFSISKLPIPFEESPQSEFGFVSSDSLLNPSERGSYMN 398

Query: 65  XCRNFGSSQDLTDQETVSQHSVRQFIDDWPKSQSDKSSVSWPQLDVQSDRTQLSISIPTI 124
             RN+    D +DQET  QH  RQFIDDWPK QS++S ++WP+ +++SD TQLSISIP +
Sbjct: 399 -SRNYTPFLDFSDQETQDQHPFRQFIDDWPKDQSNRSDIAWPE-ELKSDWTQLSISIP-M 455

Query: 125 AHTDYMSSTSSPNNERVTLS 144
           + +D+ SS+SSP  E++  S
Sbjct: 456 SSSDFSSSSSSPTQEKLAFS 475