Jatropha Genome Database
- JcCD0055602.10
BLASTP 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCD0055602.10 - phase: 2 /pseudo/partial
(114 letters)
Database: trembl
11,636,205 sequences; 3,746,823,912 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
B9SB08_RICCO (tr|B9SB08) ATP binding protein, putative OS=Ricinu... 86 2e-15
B9GGK0_POPTR (tr|B9GGK0) Predicted protein OS=Populus trichocarp... 84 6e-15
B9N5R9_POPTR (tr|B9N5R9) Predicted protein OS=Populus trichocarp... 71 4e-11
A5C1N3_VITVI (tr|A5C1N3) Putative uncharacterized protein OS=Vit... 68 4e-10
D7SU74_VITVI (tr|D7SU74) Whole genome shotgun sequence of line P... 65 2e-09
>B9SB08_RICCO (tr|B9SB08) ATP binding protein, putative OS=Ricinus communis
GN=RCOM_1335970 PE=4 SV=1
Length = 1548
Score = 85.5 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 41/65 (63%), Positives = 46/65 (70%)
Query: 50 KLESAHDNIPTYYVVFSNYNDYDSVSRIFCATRTCLVHCSLDTETESMVKKVLSVLKMEE 109
KL H NIP Y VVFSN ND SVSRIFCA RTC+V CSLDTE E +V+K+ LK E
Sbjct: 1025 KLGLPHGNIPAYCVVFSNINDPRSVSRIFCAIRTCMVRCSLDTERECLVQKIFHALKTEA 1084
Query: 110 KLLPK 114
K+ PK
Sbjct: 1085 KISPK 1089
>B9GGK0_POPTR (tr|B9GGK0) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_753718 PE=4 SV=1
Length = 1716
Score = 83.6 bits (205), Expect = 6e-15, Method: Composition-based stats.
Identities = 39/70 (55%), Positives = 51/70 (72%)
Query: 45 FHLNPKLESAHDNIPTYYVVFSNYNDYDSVSRIFCATRTCLVHCSLDTETESMVKKVLSV 104
F + +L S HDNIP Y V+FS+ ND S+SR+F AT+TCL CSLD + + MV+K+L
Sbjct: 1186 FPIEGELGSIHDNIPKYCVMFSDINDTISMSRVFFATQTCLARCSLDIQADCMVQKILRA 1245
Query: 105 LKMEEKLLPK 114
LKME K+LPK
Sbjct: 1246 LKMEGKILPK 1255
>B9N5R9_POPTR (tr|B9N5R9) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_582603 PE=4 SV=1
Length = 1681
Score = 70.9 bits (172), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/62 (51%), Positives = 43/62 (69%)
Query: 53 SAHDNIPTYYVVFSNYNDYDSVSRIFCATRTCLVHCSLDTETESMVKKVLSVLKMEEKLL 112
S HDNIP Y V+ S+ D S+SR+ ATRTC+ CSLD + + +V+K+L LK+EE L
Sbjct: 1159 SRHDNIPKYCVMQSDIKDTISMSRVLSATRTCMTRCSLDIQADCLVQKILCALKLEENSL 1218
Query: 113 PK 114
PK
Sbjct: 1219 PK 1220
>A5C1N3_VITVI (tr|A5C1N3) Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_030975 PE=4 SV=1
Length = 1100
Score = 67.8 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 42/62 (67%)
Query: 53 SAHDNIPTYYVVFSNYNDYDSVSRIFCATRTCLVHCSLDTETESMVKKVLSVLKMEEKLL 112
+ HDNIP + +VFS+ + +SRI CA RTC+ HC L + ++ MV++++ L ME LL
Sbjct: 948 APHDNIPEFCIVFSDTKENSCISRILCAIRTCIAHCHLVSRSDWMVEEIMHALLMEVDLL 1007
Query: 113 PK 114
PK
Sbjct: 1008 PK 1009
>D7SU74_VITVI (tr|D7SU74) Whole genome shotgun sequence of line PN40024,
scaffold_8.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00035591001 PE=4 SV=1
Length = 884
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 44/65 (67%)
Query: 50 KLESAHDNIPTYYVVFSNYNDYDSVSRIFCATRTCLVHCSLDTETESMVKKVLSVLKMEE 109
++ + HDNIP + +VFS+ + +SRI CA RTC+ HC L + ++ MV++++ L ME
Sbjct: 335 EVGAPHDNIPEFCIVFSDTKENSCISRILCAIRTCIAHCHLVSRSDWMVEEIMHALLMEV 394
Query: 110 KLLPK 114
LLPK
Sbjct: 395 DLLPK 399