Jatropha Genome Database

JcCB0969321.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0969321.10 - phase: 0 /partial/short
         (39 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9SBZ0_RICCO (tr|B9SBZ0) Calmodulin binding protein, putative OS...    70   7e-11
B9IMH0_POPTR (tr|B9IMH0) Predicted protein OS=Populus trichocarp...    62   2e-08
B9HAQ9_POPTR (tr|B9HAQ9) Predicted protein OS=Populus trichocarp...    62   2e-08
A5AIT8_VITVI (tr|A5AIT8) Putative uncharacterized protein OS=Vit...    56   2e-06
D7SSP0_VITVI (tr|D7SSP0) Whole genome shotgun sequence of line P...    54   5e-06

>B9SBZ0_RICCO (tr|B9SBZ0) Calmodulin binding protein, putative OS=Ricinus
          communis GN=RCOM_0700870 PE=4 SV=1
          Length = 425

 Score = 70.1 bits (170), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 32/37 (86%), Positives = 35/37 (94%)

Query: 1  MENSRNRRVEKRGYEQSVEDESDHLPDPKKAKLPALA 37
          MENSR RRV+KRGYEQSVEDE +HLPDPKKAK+PALA
Sbjct: 1  MENSRGRRVDKRGYEQSVEDEDNHLPDPKKAKMPALA 37


>B9IMH0_POPTR (tr|B9IMH0) Predicted protein OS=Populus trichocarpa
          GN=POPTRDRAFT_779599 PE=4 SV=1
          Length = 592

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/37 (78%), Positives = 34/37 (91%)

Query: 1  MENSRNRRVEKRGYEQSVEDESDHLPDPKKAKLPALA 37
          ME+SR RRVEKRGYEQ V+DE+D+LP+ KKAKLPALA
Sbjct: 1  MESSRGRRVEKRGYEQGVDDEADNLPESKKAKLPALA 37


>B9HAQ9_POPTR (tr|B9HAQ9) Predicted protein OS=Populus trichocarpa
          GN=POPTRDRAFT_762879 PE=4 SV=1
          Length = 593

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/37 (78%), Positives = 35/37 (94%)

Query: 1  MENSRNRRVEKRGYEQSVEDESDHLPDPKKAKLPALA 37
          ME+SR RRVEKRGY+QSV+DE+D+LP+ KKAKLPALA
Sbjct: 1  MESSRGRRVEKRGYDQSVDDEADNLPESKKAKLPALA 37


>A5AIT8_VITVI (tr|A5AIT8) Putative uncharacterized protein OS=Vitis vinifera
          GN=VITISV_001748 PE=4 SV=1
          Length = 91

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/37 (78%), Positives = 31/37 (83%), Gaps = 1/37 (2%)

Query: 1  MENSRNRRVEKRGYEQSVEDESDHLPDPKKAKLPALA 37
          ME SR+RRVEKRGYEQSVED+ D LP  KK KLPALA
Sbjct: 1  MEGSRSRRVEKRGYEQSVEDQ-DDLPGSKKPKLPALA 36


>D7SSP0_VITVI (tr|D7SSP0) Whole genome shotgun sequence of line PN40024,
          scaffold_206.assembly12x (Fragment) OS=Vitis vinifera
          GN=VIT_00003724001 PE=4 SV=1
          Length = 381

 Score = 54.3 bits (129), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/37 (75%), Positives = 31/37 (83%), Gaps = 1/37 (2%)

Query: 1  MENSRNRRVEKRGYEQSVEDESDHLPDPKKAKLPALA 37
          ME SR+RRV+KRGYEQSVED+ D LP  KK KLPALA
Sbjct: 1  MEGSRSRRVDKRGYEQSVEDQDD-LPGSKKPKLPALA 36