Jatropha Genome Database

JcCB0907471.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0907471.10 - phase: 2 /partial
         (85 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9RYW0_RICCO (tr|B9RYW0) Ubiquitin carboxyl-terminal hydrolase O...   133   6e-30
B9GIT5_POPTR (tr|B9GIT5) Ubiquitin carboxyl-terminal hydrolase O...   109   9e-23
B9I0S6_POPTR (tr|B9I0S6) Ubiquitin carboxyl-terminal hydrolase O...   103   4e-21
D7TVT0_VITVI (tr|D7TVT0) Whole genome shotgun sequence of line P...   103   7e-21
D7LYQ3_ARALY (tr|D7LYQ3) Ubiquitin carboxyl-terminal hydrolase f...    74   7e-12
B9DFI6_ARATH (tr|B9DFI6) Ubiquitin carboxyl-terminal hydrolase O...    71   4e-11
Q8LMT7_ORYSJ (tr|Q8LMT7) Ubiquitin carboxyl-terminal hydrolase O...    63   1e-08
Q33AW7_ORYSJ (tr|Q33AW7) Ubiquitin carboxyl-terminal hydrolase O...    63   1e-08
B8BFT3_ORYSI (tr|B8BFT3) Putative uncharacterized protein OS=Ory...    63   1e-08
Q2R4I5_ORYSJ (tr|Q2R4I5) Os11g0473200 protein OS=Oryza sativa su...    60   1e-07
B9GAM6_ORYSJ (tr|B9GAM6) Ubiquitin carboxyl-terminal hydrolase O...    59   1e-07
B8BKF7_ORYSI (tr|B8BKF7) Ubiquitin carboxyl-terminal hydrolase O...    59   1e-07
B9HDU9_POPTR (tr|B9HDU9) Ubiquitin carboxyl-terminal hydrolase O...    59   2e-07
D7KID0_ARALY (tr|D7KID0) Ubiquitin carboxyl-terminal hydrolase f...    57   9e-07
C5WND1_SORBI (tr|C5WND1) Ubiquitin carboxyl-terminal hydrolase O...    56   1e-06

>B9RYW0_RICCO (tr|B9RYW0) Ubiquitin carboxyl-terminal hydrolase OS=Ricinus
           communis GN=RCOM_1314030 PE=3 SV=1
          Length = 938

 Score =  133 bits (335), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 60/85 (70%), Positives = 73/85 (85%)

Query: 1   WYASWEKYVGQGSDDLLVDGQSPDSQDFHVAPSGMADRPGPINNSEIVENGSGGESDDLE 60
           W+A W++YVGQG++  LVDGQ  DSQ  HV P  +ADRPGPI+NS++V+NGS  E+DDLE
Sbjct: 53  WFAGWQRYVGQGNNSHLVDGQPSDSQHLHVVPLTVADRPGPIDNSDLVQNGSNIEADDLE 112

Query: 61  LARTLLEGRDYVLVPQKVWEKLVQW 85
           L+RTLLEGRDYVLVPQKVW+KLVQW
Sbjct: 113 LSRTLLEGRDYVLVPQKVWDKLVQW 137


>B9GIT5_POPTR (tr|B9GIT5) Ubiquitin carboxyl-terminal hydrolase OS=Populus
           trichocarpa GN=POPTRDRAFT_798230 PE=3 SV=1
          Length = 933

 Score =  109 bits (273), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 53/85 (62%), Positives = 66/85 (77%), Gaps = 6/85 (7%)

Query: 1   WYASWEKYVGQGSDDLLVDGQSPDSQDFHVAPSGMADRPGPINNSEIVENGSGGESDDLE 60
           W++ WE+YVGQG  D L +G+S +SQD        A+RPGPI+NS+I+E GSG E D+LE
Sbjct: 58  WFSKWERYVGQGFVDNLDNGKSLESQDLD------AERPGPIDNSDIIEGGSGNEGDELE 111

Query: 61  LARTLLEGRDYVLVPQKVWEKLVQW 85
           L R LLEG+DYVLVP+KVWEKLVQW
Sbjct: 112 LVRALLEGKDYVLVPKKVWEKLVQW 136


>B9I0S6_POPTR (tr|B9I0S6) Ubiquitin carboxyl-terminal hydrolase OS=Populus
           trichocarpa GN=POPTRDRAFT_834165 PE=3 SV=1
          Length = 942

 Score =  103 bits (258), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 51/85 (60%), Positives = 63/85 (74%), Gaps = 6/85 (7%)

Query: 1   WYASWEKYVGQGSDDLLVDGQSPDSQDFHVAPSGMADRPGPINNSEIVENGSGGESDDLE 60
           W++ WE YVG+G  D L +G+S + QD  V      +RPGPI+NS+I+E  S  E D+LE
Sbjct: 62  WFSKWESYVGRGGVDNLDNGKSSEPQDLDV------ERPGPIDNSDIIEGRSSNEGDELE 115

Query: 61  LARTLLEGRDYVLVPQKVWEKLVQW 85
           L RTLLEGRDYVLVP+KVWEKLVQW
Sbjct: 116 LVRTLLEGRDYVLVPKKVWEKLVQW 140


>D7TVT0_VITVI (tr|D7TVT0) Whole genome shotgun sequence of line PN40024,
           scaffold_25.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00019677001 PE=4 SV=1
          Length = 944

 Score =  103 bits (257), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 48/83 (57%), Positives = 61/83 (73%)

Query: 3   ASWEKYVGQGSDDLLVDGQSPDSQDFHVAPSGMADRPGPINNSEIVENGSGGESDDLELA 62
            SW++Y+GQG+ +  ++G   DSQ     PS  A+RPGPI+NS+IV NG+  E DDLE+ 
Sbjct: 55  TSWQRYIGQGNGEYPINGHLSDSQRLDAVPSKTAERPGPIDNSDIVLNGNECELDDLEIL 114

Query: 63  RTLLEGRDYVLVPQKVWEKLVQW 85
           RTL EGRDYVLVPQ+VWEKL  W
Sbjct: 115 RTLEEGRDYVLVPQEVWEKLFDW 137


>D7LYQ3_ARALY (tr|D7LYQ3) Ubiquitin carboxyl-terminal hydrolase family protein
           OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_352131
           PE=4 SV=1
          Length = 913

 Score = 73.6 bits (179), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 38/85 (44%), Positives = 56/85 (65%), Gaps = 17/85 (20%)

Query: 1   WYASWEKYVGQGSDDLLVDGQSPDSQDFHVAPSGMADRPGPINNSEIVENGSGGESDDLE 60
           WYASW+KYV Q +++ L               SG + RPG I+N +I+E+ S  +++D +
Sbjct: 52  WYASWQKYVEQSTNECL---------------SGESSRPGAIDNHDIIESES--DANDPQ 94

Query: 61  LARTLLEGRDYVLVPQKVWEKLVQW 85
           L R L+EG DYVLVPQ+VW++LV+W
Sbjct: 95  LRRLLVEGVDYVLVPQEVWKRLVEW 119


>B9DFI6_ARATH (tr|B9DFI6) Ubiquitin carboxyl-terminal hydrolase OS=Arabidopsis
           thaliana GN=At4g10590 PE=2 SV=1
          Length = 910

 Score = 70.9 bits (172), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 38/85 (44%), Positives = 55/85 (64%), Gaps = 14/85 (16%)

Query: 1   WYASWEKYVGQGSDDLLVDGQSPDSQDFHVAPSGMADRPGPINNSEIVENGSGGESDDLE 60
           WY SWEKYV Q + +  + G+S +           A RPGPI+N +I+E+ S  + +D +
Sbjct: 52  WYTSWEKYVEQSTKEY-ISGESSE-----------ASRPGPIDNHDIIESES--DVNDPQ 97

Query: 61  LARTLLEGRDYVLVPQKVWEKLVQW 85
           L R L+E  DYVLVPQ+VW++LV+W
Sbjct: 98  LRRLLMERVDYVLVPQEVWKRLVEW 122


>Q8LMT7_ORYSJ (tr|Q8LMT7) Ubiquitin carboxyl-terminal hydrolase OS=Oryza sativa
           subsp. japonica GN=OSJNBa0050E08.11 PE=3 SV=1
          Length = 890

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 48/85 (56%), Gaps = 10/85 (11%)

Query: 1   WYASWEKYVGQGSDDLLVDGQSPDSQDFHVAPSGMADRPGPINNSEIVENGSGGESDDLE 60
           W+ +W+ YVG      L+    PD  D  + P     RPG I+NS++V   S    D+ E
Sbjct: 51  WWLNWQSYVG------LI---KPDENDADMLPQA-PSRPGEIDNSKLVSEESSSIGDEPE 100

Query: 61  LARTLLEGRDYVLVPQKVWEKLVQW 85
           L RTL EG DY LVPQ+VW KL +W
Sbjct: 101 LQRTLREGDDYALVPQEVWRKLHEW 125


>Q33AW7_ORYSJ (tr|Q33AW7) Ubiquitin carboxyl-terminal hydrolase OS=Oryza sativa
           subsp. japonica GN=Os10g0160000 PE=2 SV=1
          Length = 931

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 48/85 (56%), Gaps = 10/85 (11%)

Query: 1   WYASWEKYVGQGSDDLLVDGQSPDSQDFHVAPSGMADRPGPINNSEIVENGSGGESDDLE 60
           W+ +W+ YVG      L+    PD  D  + P     RPG I+NS++V   S    D+ E
Sbjct: 51  WWLNWQSYVG------LI---KPDENDADMLPQA-PSRPGEIDNSKLVSEESSSIGDEPE 100

Query: 61  LARTLLEGRDYVLVPQKVWEKLVQW 85
           L RTL EG DY LVPQ+VW KL +W
Sbjct: 101 LQRTLREGDDYALVPQEVWRKLHEW 125


>B8BFT3_ORYSI (tr|B8BFT3) Putative uncharacterized protein OS=Oryza sativa subsp.
           indica GN=OsI_32808 PE=4 SV=1
          Length = 788

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 48/85 (56%), Gaps = 10/85 (11%)

Query: 1   WYASWEKYVGQGSDDLLVDGQSPDSQDFHVAPSGMADRPGPINNSEIVENGSGGESDDLE 60
           W+ +W+ YVG      L+    PD  D  + P     RPG I+NS++V   S    D+ E
Sbjct: 51  WWLNWQSYVG------LI---KPDENDADMLPQA-PSRPGEIDNSKLVSEESSSIGDEPE 100

Query: 61  LARTLLEGRDYVLVPQKVWEKLVQW 85
           L RTL EG DY LVPQ+VW KL +W
Sbjct: 101 LQRTLREGDDYALVPQEVWRKLHEW 125


>Q2R4I5_ORYSJ (tr|Q2R4I5) Os11g0473200 protein OS=Oryza sativa subsp. japonica
           GN=Os11g0473200 PE=4 SV=2
          Length = 382

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 6/86 (6%)

Query: 1   WYASWEKYVGQGSDDLLVDGQSPDSQDFHVAPSGMADRPGPINNSEIVENGSGGESD-DL 59
           W+ SW  YV Q      +   + +    H   S +  RPG I+N++++++ +   S+ ++
Sbjct: 49  WWQSWIDYVIQD-----LANSTNNGSHHHEHGSNVLRRPGAIDNTDLIDDTASEVSNMEI 103

Query: 60  ELARTLLEGRDYVLVPQKVWEKLVQW 85
           EL  TL+EGRDY+L+PQ+VWEKL  W
Sbjct: 104 ELHDTLVEGRDYILLPQQVWEKLHGW 129


>B9GAM6_ORYSJ (tr|B9GAM6) Ubiquitin carboxyl-terminal hydrolase OS=Oryza sativa
           subsp. japonica GN=OsJ_33861 PE=3 SV=1
          Length = 918

 Score = 59.3 bits (142), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 6/86 (6%)

Query: 1   WYASWEKYVGQGSDDLLVDGQSPDSQDFHVAPSGMADRPGPINNSEIVENGSGGESD-DL 59
           W+ SW  YV Q      +   + +    H   S +  RPG I+N++++++ +   S+ ++
Sbjct: 49  WWQSWIDYVIQD-----LANSTNNGSHHHEHGSNVLRRPGAIDNTDLIDDTASEVSNMEI 103

Query: 60  ELARTLLEGRDYVLVPQKVWEKLVQW 85
           EL  TL+EGRDY+L+PQ+VWEKL  W
Sbjct: 104 ELHDTLVEGRDYILLPQQVWEKLHGW 129


>B8BKF7_ORYSI (tr|B8BKF7) Ubiquitin carboxyl-terminal hydrolase OS=Oryza sativa
           subsp. indica GN=OsI_36069 PE=3 SV=1
          Length = 918

 Score = 59.3 bits (142), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 6/86 (6%)

Query: 1   WYASWEKYVGQGSDDLLVDGQSPDSQDFHVAPSGMADRPGPINNSEIVENGSGGESD-DL 59
           W+ SW  YV Q      +   + +    H   S +  RPG I+N++++++ +   S+ ++
Sbjct: 49  WWQSWIDYVIQD-----LANSTNNGSHHHEHGSNVLRRPGAIDNTDLIDDTASEVSNMEI 103

Query: 60  ELARTLLEGRDYVLVPQKVWEKLVQW 85
           EL  TL+EGRDY+L+PQ+VWEKL  W
Sbjct: 104 ELHDTLVEGRDYILLPQQVWEKLHGW 129


>B9HDU9_POPTR (tr|B9HDU9) Ubiquitin carboxyl-terminal hydrolase OS=Populus
           trichocarpa GN=POPTRDRAFT_560337 PE=3 SV=1
          Length = 951

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 4/86 (4%)

Query: 1   WYASWEKYVGQGSDDLLVDGQSPDSQDFHVAPSGMADRPGPINNSEIVENGSGGESD-DL 59
           W+  W  YV Q   ++  DG S       V+ S    RP  I+NS+++ + +  ES+   
Sbjct: 50  WWQHWIDYVNQEQTNVTNDGSSMLENCDAVSSS---RRPASIDNSDLIHDANSEESNVGF 106

Query: 60  ELARTLLEGRDYVLVPQKVWEKLVQW 85
           E+  TLLEGRDY+L+PQ+VW +L  W
Sbjct: 107 EIHDTLLEGRDYILLPQEVWNQLYSW 132


>D7KID0_ARALY (tr|D7KID0) Ubiquitin carboxyl-terminal hydrolase family protein
           OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_473468
           PE=4 SV=1
          Length = 894

 Score = 56.6 bits (135), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 19/85 (22%)

Query: 1   WYASWEKYVGQGSDDLLVDGQSPDSQDFHVAPSGMADRPGPINNSEIVENGSGGESDDLE 60
           WY  W+++VG     LL +  S               RPGPI+N +I+++ S  ++ D +
Sbjct: 49  WYTRWQRFVG-----LLTEETSE------------VTRPGPIDNHDIIDSES--DASDPQ 89

Query: 61  LARTLLEGRDYVLVPQKVWEKLVQW 85
           L   L EG DY LVPQ+VW KLV+W
Sbjct: 90  LRIMLEEGVDYTLVPQQVWRKLVEW 114


>C5WND1_SORBI (tr|C5WND1) Ubiquitin carboxyl-terminal hydrolase OS=Sorghum
           bicolor GN=Sb01g025350 PE=3 SV=1
          Length = 935

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 10/85 (11%)

Query: 1   WYASWEKYVGQGSDDLLVDGQSPDSQDFHVAPSGMADRPGPINNSEIVENGSGGESDDLE 60
           W+  W+ YVG     +   G++   Q     P  M +RPG I+NS++V       S++ E
Sbjct: 51  WWMEWQGYVG-----IFSHGENGTEQ----FPQAM-NRPGEIDNSKLVSAERINGSEEPE 100

Query: 61  LARTLLEGRDYVLVPQKVWEKLVQW 85
           L RTL EG  Y LVPQ+VW++L +W
Sbjct: 101 LQRTLREGEHYTLVPQEVWQRLYEW 125