Jatropha Genome Database

JcCB0902641.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0902641.10 - phase: 0 /pseudo/partial
         (104 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D7U6P4_VITVI (tr|D7U6P4) Whole genome shotgun sequence of line P...    94   4e-18
B9S6T3_RICCO (tr|B9S6T3) GTP binding protein, putative OS=Ricinu...    87   4e-16
B9H656_POPTR (tr|B9H656) Predicted protein OS=Populus trichocarp...    80   5e-14
B9DFM0_ARATH (tr|B9DFM0) AT5G66030 protein (Fragment) OS=Arabido...    68   3e-10
C5X8H3_SORBI (tr|C5X8H3) Putative uncharacterized protein Sb02g0...    55   3e-06

>D7U6P4_VITVI (tr|D7U6P4) Whole genome shotgun sequence of line PN40024,
           scaffold_210.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00003839001 PE=4 SV=1
          Length = 737

 Score = 94.4 bits (233), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 47/60 (78%), Positives = 55/60 (91%)

Query: 3   DLQDALAHRDKELAERDAALNNSKKQIKSIEIKLDSANARHQLEKEAWETNLQNLEESWK 62
           DLQDALA+ DKELA RDAAL+++K+QIKSIE KLDSANAR+Q EKEAWE NLQNLEE+W+
Sbjct: 445 DLQDALANHDKELATRDAALSSAKQQIKSIEKKLDSANARYQSEKEAWEINLQNLEETWR 504


>B9S6T3_RICCO (tr|B9S6T3) GTP binding protein, putative OS=Ricinus communis
           GN=RCOM_0873670 PE=4 SV=1
          Length = 779

 Score = 87.4 bits (215), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 55/67 (82%)

Query: 3   DLQDALAHRDKELAERDAALNNSKKQIKSIEIKLDSANARHQLEKEAWETNLQNLEESWK 62
           DLQDALA  DKE+AERDAA+  +K+QI +IE K+DSANARHQLEKEA E NLQNLEE+W+
Sbjct: 507 DLQDALADCDKEVAERDAAIIEAKQQINNIEKKIDSANARHQLEKEALEINLQNLEETWR 566

Query: 63  CNISMIN 69
             +S + 
Sbjct: 567 NQLSFLT 573


>B9H656_POPTR (tr|B9H656) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_818360 PE=4 SV=1
          Length = 791

 Score = 80.5 bits (197), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 41/60 (68%), Positives = 50/60 (83%)

Query: 3   DLQDALAHRDKELAERDAALNNSKKQIKSIEIKLDSANARHQLEKEAWETNLQNLEESWK 62
           DLQ+ALA+ DKELA RDAAL+++ +QIKS+E KLDSAN   Q EKE W+ NLQNLEESW+
Sbjct: 500 DLQEALANHDKELATRDAALSSAMQQIKSLETKLDSANVHLQSEKETWKINLQNLEESWR 559


>B9DFM0_ARATH (tr|B9DFM0) AT5G66030 protein (Fragment) OS=Arabidopsis thaliana
           GN=AT5G66030 PE=2 SV=1
          Length = 704

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/60 (58%), Positives = 47/60 (78%)

Query: 3   DLQDALAHRDKELAERDAALNNSKKQIKSIEIKLDSANARHQLEKEAWETNLQNLEESWK 62
           DLQ ALA  +KEL ER  AL ++ +QIKS+E+KLDS  AR+Q EK+AWE +L+ LEE+W+
Sbjct: 485 DLQSALASLEKELEERAGALKDASEQIKSLEVKLDSTVARNQAEKQAWEEDLRVLEETWR 544


>C5X8H3_SORBI (tr|C5X8H3) Putative uncharacterized protein Sb02g033040 OS=Sorghum
           bicolor GN=Sb02g033040 PE=4 SV=1
          Length = 516

 Score = 54.7 bits (130), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 41/63 (65%)

Query: 3   DLQDALAHRDKELAERDAALNNSKKQIKSIEIKLDSANARHQLEKEAWETNLQNLEESWK 62
           DLQ A +    E+  RD AL +++K++K +  KLDS  +    EKE+WE NL N+EESW+
Sbjct: 442 DLQKAESRHGDEVEARDMALADAEKKLKDVMKKLDSVTSNFISEKESWEKNLSNVEESWR 501

Query: 63  CNI 65
           C +
Sbjct: 502 CKM 504