Jatropha Genome Database

JcCB0897851.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0897851.10 + phase: 0 /pseudo/partial
         (117 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9RZY6_RICCO (tr|B9RZY6) Neurobeachin, putative OS=Ricinus commu...   114   3e-24
D7T670_VITVI (tr|D7T670) Whole genome shotgun sequence of line P...    95   3e-18
D7T625_VITVI (tr|D7T625) Whole genome shotgun sequence of line P...    95   3e-18
B5B8Z0_ARATH (tr|B5B8Z0) BEACH domain containing protein At5g185...    84   3e-15
C5XIY4_SORBI (tr|C5XIY4) Putative uncharacterized protein Sb03g0...    74   6e-12
Q5ZDE5_ORYSJ (tr|Q5ZDE5) BWF1-like protein OS=Oryza sativa subsp...    69   2e-10
Q5ZDE4_ORYSJ (tr|Q5ZDE4) BWF1-like protein OS=Oryza sativa subsp...    69   2e-10

>B9RZY6_RICCO (tr|B9RZY6) Neurobeachin, putative OS=Ricinus communis
            GN=RCOM_1002950 PE=4 SV=1
          Length = 1575

 Score =  114 bits (286), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 54/64 (84%), Positives = 58/64 (90%)

Query: 1    MNKPEPVQSWSALALIDCLSTLDGLVSFLPREMVVKELIEGKSCLHVAVLMQTNLEIPVL 60
            MNKPEPVQSWSALALIDCLSTLDGLV+FLP E+V KELIE +SCLHV VLMQTNLEIPVL
Sbjct: 1015 MNKPEPVQSWSALALIDCLSTLDGLVAFLPSEVVAKELIEDRSCLHVTVLMQTNLEIPVL 1074

Query: 61   QFVS 64
            Q  +
Sbjct: 1075 QVAA 1078


>D7T670_VITVI (tr|D7T670) Whole genome shotgun sequence of line PN40024,
           scaffold_20.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00017662001 PE=4 SV=1
          Length = 1520

 Score = 94.7 bits (234), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 45/64 (70%), Positives = 52/64 (81%)

Query: 1   MNKPEPVQSWSALALIDCLSTLDGLVSFLPREMVVKELIEGKSCLHVAVLMQTNLEIPVL 60
           MNKPEP+QSWSALALIDCL   +GLV+ LP+E VVKEL E +S +HV VLMQ NLEIPVL
Sbjct: 875 MNKPEPMQSWSALALIDCLMAFEGLVTVLPKEAVVKELTEDQSFVHVMVLMQANLEIPVL 934

Query: 61  QFVS 64
           Q  +
Sbjct: 935 QVAA 938


>D7T625_VITVI (tr|D7T625) Whole genome shotgun sequence of line PN40024,
            scaffold_20.assembly12x (Fragment) OS=Vitis vinifera
            GN=VIT_00017603001 PE=4 SV=1
          Length = 1609

 Score = 94.7 bits (234), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 45/64 (70%), Positives = 52/64 (81%)

Query: 1    MNKPEPVQSWSALALIDCLSTLDGLVSFLPREMVVKELIEGKSCLHVAVLMQTNLEIPVL 60
            MNKPEP+QSWSALALIDCL   +GLV+ LP+E VVKEL E +S +HV VLMQ NLEIPVL
Sbjct: 964  MNKPEPMQSWSALALIDCLMAFEGLVTVLPKEAVVKELTEDQSFVHVMVLMQANLEIPVL 1023

Query: 61   QFVS 64
            Q  +
Sbjct: 1024 QVAA 1027


>B5B8Z0_ARATH (tr|B5B8Z0) BEACH domain containing protein At5g18530 (Fragment)
           OS=Arabidopsis thaliana GN=At5g18530 PE=2 SV=1
          Length = 393

 Score = 84.3 bits (207), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 39/64 (60%), Positives = 49/64 (76%)

Query: 1   MNKPEPVQSWSALALIDCLSTLDGLVSFLPREMVVKELIEGKSCLHVAVLMQTNLEIPVL 60
           M KPEPV SW +LAL DCL TLDGLV+ +  E+++ EL +G+ CLHV VLMQ NLE+ VL
Sbjct: 271 MKKPEPVHSWCSLALSDCLITLDGLVALISDELLIHELTKGRLCLHVRVLMQKNLELRVL 330

Query: 61  QFVS 64
           QF +
Sbjct: 331 QFAA 334


>C5XIY4_SORBI (tr|C5XIY4) Putative uncharacterized protein Sb03g013240 OS=Sorghum
           bicolor GN=Sb03g013240 PE=4 SV=1
          Length = 1485

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 33/64 (51%), Positives = 49/64 (76%)

Query: 1   MNKPEPVQSWSALALIDCLSTLDGLVSFLPREMVVKELIEGKSCLHVAVLMQTNLEIPVL 60
           MNKPEP  SW++ ALID LS L+GLVS LP + V+KEL++ ++C+++ VLMQ  L++ V+
Sbjct: 856 MNKPEPQHSWNSFALIDSLSALEGLVSVLPVKTVIKELLQDQACVYIKVLMQIPLDLRVI 915

Query: 61  QFVS 64
           Q  +
Sbjct: 916 QVAA 919


>Q5ZDE5_ORYSJ (tr|Q5ZDE5) BWF1-like protein OS=Oryza sativa subsp. japonica
            GN=P0537A05.24-2 PE=4 SV=1
          Length = 1619

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 47/64 (73%)

Query: 1    MNKPEPVQSWSALALIDCLSTLDGLVSFLPREMVVKELIEGKSCLHVAVLMQTNLEIPVL 60
            +NKPEP  SW++ AL+D LS L+GLVS LP + +++EL++ + CLH+ VL Q +L + V+
Sbjct: 995  INKPEPQHSWNSFALMDGLSALEGLVSILPVKTILRELLQDQVCLHIKVLTQVHLNLRVI 1054

Query: 61   QFVS 64
            Q  +
Sbjct: 1055 QVAA 1058


>Q5ZDE4_ORYSJ (tr|Q5ZDE4) BWF1-like protein OS=Oryza sativa subsp. japonica
           GN=P0537A05.24-1 PE=2 SV=1
          Length = 1467

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 47/64 (73%)

Query: 1   MNKPEPVQSWSALALIDCLSTLDGLVSFLPREMVVKELIEGKSCLHVAVLMQTNLEIPVL 60
           +NKPEP  SW++ AL+D LS L+GLVS LP + +++EL++ + CLH+ VL Q +L + V+
Sbjct: 843 INKPEPQHSWNSFALMDGLSALEGLVSILPVKTILRELLQDQVCLHIKVLTQVHLNLRVI 902

Query: 61  QFVS 64
           Q  +
Sbjct: 903 QVAA 906