Jatropha Genome Database

JcCB0892281.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0892281.10 - phase: 0 /pseudo/partial
         (80 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A5BX90_VITVI (tr|A5BX90) Putative uncharacterized protein OS=Vit...   112   2e-23
D7T0Z4_VITVI (tr|D7T0Z4) Whole genome shotgun sequence of line P...   105   2e-21
B9SRN9_RICCO (tr|B9SRN9) Putative uncharacterized protein OS=Ric...   104   3e-21
B9HYE1_POPTR (tr|B9HYE1) Predicted protein OS=Populus trichocarp...   102   1e-20
B9HI13_POPTR (tr|B9HI13) Predicted protein OS=Populus trichocarp...    99   1e-19
Q9LTW7_ARATH (tr|Q9LTW7) Zinc finger protein-like OS=Arabidopsis...    72   2e-11
D7L0J2_ARALY (tr|D7L0J2) Enhancer of ag-4 1 OS=Arabidopsis lyrat...    70   9e-11
D6MJY6_9ASPA (tr|D6MJY6) Transcription factor (Fragment) OS=Lyco...    66   1e-09

>A5BX90_VITVI (tr|A5BX90) Putative uncharacterized protein OS=Vitis vinifera
           GN=VITISV_004748 PE=4 SV=1
          Length = 1504

 Score =  112 bits (279), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 47/60 (78%), Positives = 52/60 (86%)

Query: 4   SCKYGATCRYNHPDRNAINPPAAAISHPIVANPAANLNIGVINPAASLYQTIDPRLAQPM 63
           SCKYGATCRYNHPDRNAINPPAAAI H IVA+PAANLN+GV+NP  S+   IDPRL+Q M
Sbjct: 518 SCKYGATCRYNHPDRNAINPPAAAIGHAIVASPAANLNVGVVNPVTSILHPIDPRLSQTM 577


>D7T0Z4_VITVI (tr|D7T0Z4) Whole genome shotgun sequence of line PN40024,
           scaffold_85.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00036686001 PE=4 SV=1
          Length = 535

 Score =  105 bits (261), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/60 (78%), Positives = 52/60 (86%)

Query: 4   SCKYGATCRYNHPDRNAINPPAAAISHPIVANPAANLNIGVINPAASLYQTIDPRLAQPM 63
           SCKYGATCRYNHPDRNAINPPAAAI H IVA+PAANLN+GV+NP  S+   IDPRL+Q M
Sbjct: 352 SCKYGATCRYNHPDRNAINPPAAAIGHAIVASPAANLNVGVVNPVTSILHPIDPRLSQTM 411


>B9SRN9_RICCO (tr|B9SRN9) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_0479530 PE=4 SV=1
          Length = 500

 Score =  104 bits (260), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 48/64 (75%), Positives = 55/64 (85%)

Query: 4   SCKYGATCRYNHPDRNAINPPAAAISHPIVANPAANLNIGVINPAASLYQTIDPRLAQPM 63
           SCKYGATCRYNHPDRNAINPPAAAI HP++A+PAANLN+G INPAAS+YQ I P  + PM
Sbjct: 321 SCKYGATCRYNHPDRNAINPPAAAIGHPLLASPAANLNLGDINPAASIYQAIYPSFSSPM 380

Query: 64  VWVN 67
           + V 
Sbjct: 381 LGVG 384


>B9HYE1_POPTR (tr|B9HYE1) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_659387 PE=4 SV=1
          Length = 532

 Score =  102 bits (254), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 47/57 (82%), Positives = 50/57 (87%)

Query: 4   SCKYGATCRYNHPDRNAINPPAAAISHPIVANPAANLNIGVINPAASLYQTIDPRLA 60
           SCKYGATCRYNHP+R AINPPAAAI HPIVA   ANLN GV NPAAS+YQTIDPRL+
Sbjct: 359 SCKYGATCRYNHPERTAINPPAAAIGHPIVAPSLANLNFGVFNPAASIYQTIDPRLS 415


>B9HI13_POPTR (tr|B9HI13) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_656369 PE=4 SV=1
          Length = 474

 Score = 99.4 bits (246), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/57 (78%), Positives = 51/57 (89%)

Query: 4   SCKYGATCRYNHPDRNAINPPAAAISHPIVANPAANLNIGVINPAASLYQTIDPRLA 60
           SCKYGATCRYNHP+R AINPPAAAI HPI+A   ANLN+GV +PAAS+YQTIDPRL+
Sbjct: 346 SCKYGATCRYNHPERTAINPPAAAIGHPIIAPSMANLNLGVFSPAASIYQTIDPRLS 402


>Q9LTW7_ARATH (tr|Q9LTW7) Zinc finger protein-like OS=Arabidopsis thaliana PE=4
           SV=1
          Length = 326

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/72 (48%), Positives = 49/72 (68%), Gaps = 6/72 (8%)

Query: 4   SCKYGATCRYNHPDRNAINPPAAAISHPIVANPAANLNIGVINPAASLYQTIDPRLAQPM 63
           SCKYGATCRYNHP+R A  P AA +++ +V++  ANLN+G++ PA S YQT    L QP 
Sbjct: 174 SCKYGATCRYNHPERTAFIPQAAGVNYSLVSSNTANLNLGLVTPATSFYQT----LTQPT 229

Query: 64  VWVNI--CRFQQ 73
            ++    C+F +
Sbjct: 230 YYMKTGECKFGE 241


>D7L0J2_ARALY (tr|D7L0J2) Enhancer of ag-4 1 OS=Arabidopsis lyrata subsp. lyrata
           GN=HUA1 PE=4 SV=1
          Length = 519

 Score = 69.7 bits (169), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 33/61 (54%), Positives = 43/61 (70%), Gaps = 4/61 (6%)

Query: 4   SCKYGATCRYNHPDRNAINPPAAAISHPIVANPAANLNIGVINPAASLYQTIDPRLAQPM 63
           SCKYGATCRYNHP+R A  P A  I++ +V++  ANLN+G++ PA S YQT    L QP 
Sbjct: 351 SCKYGATCRYNHPERTAFIPQATGINYSLVSSNTANLNLGMVTPATSFYQT----LTQPT 406

Query: 64  V 64
           +
Sbjct: 407 L 407


>D6MJY6_9ASPA (tr|D6MJY6) Transcription factor (Fragment) OS=Lycoris longituba
          PE=2 SV=1
          Length = 148

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/63 (50%), Positives = 42/63 (66%)

Query: 4  SCKYGATCRYNHPDRNAINPPAAAISHPIVANPAANLNIGVINPAASLYQTIDPRLAQPM 63
          SCKYGATCRYNHP+R +INPP  A     +     +L  G++NPAA+L  ++DP LAQ  
Sbjct: 36 SCKYGATCRYNHPERTSINPPLGANIGQTIMPSGTSLPAGLVNPAANLIPSLDPLLAQAS 95

Query: 64 VWV 66
          + V
Sbjct: 96 LGV 98