Jatropha Genome Database

JcCB0836121.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0836121.10 + phase: 1 /partial
         (65 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9RB25_RICCO (tr|B9RB25) Putative uncharacterized protein OS=Ric...    81   4e-14
B9I3A0_POPTR (tr|B9I3A0) Predicted protein (Fragment) OS=Populus...    68   3e-10
B9IER8_POPTR (tr|B9IER8) Predicted protein (Fragment) OS=Populus...    64   6e-09
D7SHS0_VITVI (tr|D7SHS0) Whole genome shotgun sequence of line P...    62   3e-08
A5AW25_VITVI (tr|A5AW25) Putative uncharacterized protein OS=Vit...    60   7e-08

>B9RB25_RICCO (tr|B9RB25) Putative uncharacterized protein OS=Ricinus communis
          GN=RCOM_1510590 PE=4 SV=1
          Length = 535

 Score = 80.9 bits (198), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 42/51 (82%), Positives = 42/51 (82%)

Query: 2  ELAQPTNEIQQPAREEATKQSPPSVFVNSEPMREDQVQNAVKISFTPKKLG 52
          E AQPTNEIQQ AREE TKQSPPSVFVNSEPMREDQVQNAVK    PK  G
Sbjct: 23 EAAQPTNEIQQQAREEVTKQSPPSVFVNSEPMREDQVQNAVKFLSHPKVRG 73


>B9I3A0_POPTR (tr|B9I3A0) Predicted protein (Fragment) OS=Populus trichocarpa
          GN=POPTRDRAFT_421624 PE=4 SV=1
          Length = 481

 Score = 67.8 bits (164), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/48 (75%), Positives = 37/48 (77%)

Query: 5  QPTNEIQQPAREEATKQSPPSVFVNSEPMREDQVQNAVKISFTPKKLG 52
          QPTN IQQ A  EA KQSPPSVFVNSEPMRE+QVQNAVK    PK  G
Sbjct: 1  QPTNGIQQDAEVEAIKQSPPSVFVNSEPMREEQVQNAVKFLSHPKVRG 48


>B9IER8_POPTR (tr|B9IER8) Predicted protein (Fragment) OS=Populus trichocarpa
          GN=POPTRDRAFT_252078 PE=4 SV=1
          Length = 482

 Score = 63.5 bits (153), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/51 (66%), Positives = 37/51 (72%)

Query: 2  ELAQPTNEIQQPAREEATKQSPPSVFVNSEPMREDQVQNAVKISFTPKKLG 52
          E  QP+  +QQ A  EA KQSPPSVFVNSEPMRE+QVQNAVK    PK  G
Sbjct: 1  ENVQPSTGVQQGAGAEAIKQSPPSVFVNSEPMREEQVQNAVKFLSHPKVRG 51


>D7SHS0_VITVI (tr|D7SHS0) Whole genome shotgun sequence of line PN40024,
          scaffold_0.assembly12x (Fragment) OS=Vitis vinifera
          GN=VIT_00007750001 PE=4 SV=1
          Length = 523

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/52 (67%), Positives = 38/52 (73%), Gaps = 1/52 (1%)

Query: 1  SELAQPTNEIQQPAREEATKQSPPSVFVNSEPMREDQVQNAVKISFTPKKLG 52
          SE+ QP NE QQ A+  AT  SPPSVFVNSEPMRE+QVQNAVK    PK  G
Sbjct: 21 SEIVQPRNEDQQDAKAAATI-SPPSVFVNSEPMREEQVQNAVKFLSHPKVRG 71


>A5AW25_VITVI (tr|A5AW25) Putative uncharacterized protein OS=Vitis vinifera
          GN=VITISV_005839 PE=4 SV=1
          Length = 523

 Score = 60.1 bits (144), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/52 (67%), Positives = 37/52 (71%), Gaps = 1/52 (1%)

Query: 1  SELAQPTNEIQQPAREEATKQSPPSVFVNSEPMREDQVQNAVKISFTPKKLG 52
          SE  QP NE QQ A+  AT  SPPSVFVNSEPMRE+QVQNAVK    PK  G
Sbjct: 21 SEXVQPRNEDQQDAKAAATI-SPPSVFVNSEPMREEQVQNAVKFLSHPKVRG 71