Jatropha Genome Database

JcCB0813641.30
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0813641.30 - phase: 0 /partial/short
         (37 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3SDF3_TRIAD (tr|B3SDF3) Putative uncharacterized protein OS=Tri...    69   2e-10
A7AR27_BABBO (tr|A7AR27) Putative uncharacterized protein OS=Bab...    59   1e-07

>B3SDF3_TRIAD (tr|B3SDF3) Putative uncharacterized protein OS=Trichoplax
          adhaerens GN=TRIADDRAFT_51202 PE=4 SV=1
          Length = 95

 Score = 68.6 bits (166), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/36 (86%), Positives = 32/36 (88%)

Query: 2  ELTRQIAPPTKNSHAPPPIESRKRSQSVNPYYIWTW 37
          ELTRQI PPTKN HAPPPIESRK  QSVNPYY+WTW
Sbjct: 60 ELTRQITPPTKNGHAPPPIESRKSYQSVNPYYVWTW 95


>A7AR27_BABBO (tr|A7AR27) Putative uncharacterized protein OS=Babesia bovis
          GN=BBOV_IV006370 PE=4 SV=1
          Length = 99

 Score = 59.3 bits (142), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/36 (75%), Positives = 29/36 (80%)

Query: 2  ELTRQIAPPTKNSHAPPPIESRKRSQSVNPYYIWTW 37
          ELTRQI PPTKN HAP P ESRK +Q VNPY +WTW
Sbjct: 64 ELTRQITPPTKNGHAPLPRESRKDNQPVNPYAVWTW 99