Jatropha Genome Database
- JcCB0800111.10
BLASTP 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0800111.10 + phase: 0 /pseudo
(94 letters)
Database: trembl
11,636,205 sequences; 3,746,823,912 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
B9S7J8_RICCO (tr|B9S7J8) Putative uncharacterized protein OS=Ric... 93 9e-18
Q9SK61_ARATH (tr|Q9SK61) Expressed protein OS=Arabidopsis thalia... 84 6e-15
Q0WS73_ARATH (tr|Q0WS73) Putative uncharacterized protein At2g20... 84 6e-15
D7L3N0_ARALY (tr|D7L3N0) Putative uncharacterized protein OS=Ara... 84 7e-15
Q8LEZ3_ARATH (tr|Q8LEZ3) Putative uncharacterized protein OS=Ara... 84 7e-15
D7SZF6_VITVI (tr|D7SZF6) Whole genome shotgun sequence of line P... 83 8e-15
D7TXG3_VITVI (tr|D7TXG3) Whole genome shotgun sequence of line P... 79 2e-13
B9IP95_POPTR (tr|B9IP95) Predicted protein (Fragment) OS=Populus... 77 5e-13
C6TBK7_SOYBN (tr|C6TBK7) Putative uncharacterized protein (Fragm... 76 1e-12
B9I5M9_POPTR (tr|B9I5M9) Predicted protein OS=Populus trichocarp... 75 2e-12
B4FV64_MAIZE (tr|B4FV64) Putative uncharacterized protein OS=Zea... 69 2e-10
B6T6J6_MAIZE (tr|B6T6J6) Putative uncharacterized protein OS=Zea... 68 3e-10
B9SZW5_RICCO (tr|B9SZW5) Putative uncharacterized protein OS=Ric... 68 3e-10
B9F805_ORYSJ (tr|B9F805) Putative uncharacterized protein OS=Ory... 67 6e-10
Q7Y1E7_ORYSJ (tr|Q7Y1E7) Putative uncharacterized protein OSJNBa... 67 6e-10
B8AP93_ORYSI (tr|B8AP93) Putative uncharacterized protein OS=Ory... 67 7e-10
C7J057_ORYSJ (tr|C7J057) Os03g0860000 protein OS=Oryza sativa su... 66 1e-09
D2GYR7_AILME (tr|D2GYR7) Putative uncharacterized protein (Fragm... 60 8e-08
A5YBM5_HORSE (tr|A5YBM5) Thyroid hormone receptor interactor 4 (... 60 1e-07
Q2KIC4_BOVIN (tr|Q2KIC4) Thyroid hormone receptor interactor 4 O... 59 2e-07
D7FGX7_ECTSI (tr|D7FGX7) Putative uncharacterized protein OS=Ect... 59 2e-07
B5DEP5_RAT (tr|B5DEP5) RCG58191 OS=Rattus norvegicus GN=Trip4 PE... 58 4e-07
D3ZEX0_RAT (tr|D3ZEX0) Putative uncharacterized protein Trip4 OS... 57 4e-07
A7RPW2_NEMVE (tr|A7RPW2) Predicted protein OS=Nematostella vecte... 57 7e-07
A8J996_CHLRE (tr|A8J996) Predicted protein OS=Chlamydomonas rein... 56 1e-06
>B9S7J8_RICCO (tr|B9S7J8) Putative uncharacterized protein OS=Ricinus communis
GN=RCOM_0608880 PE=4 SV=1
Length = 328
Score = 93.2 bits (230), Expect = 9e-18, Method: Composition-based stats.
Identities = 37/39 (94%), Positives = 39/39 (100%)
Query: 18 RSHGNYTNPCLTMHQPWASLLVYGIKRIEGRSWPAPIRG 56
RSHGNYTNPCLTMHQPWASLLVYGIKRIEGRSWP+P+RG
Sbjct: 4 RSHGNYTNPCLTMHQPWASLLVYGIKRIEGRSWPSPVRG 42
>Q9SK61_ARATH (tr|Q9SK61) Expressed protein OS=Arabidopsis thaliana
GN=At2g20410 PE=2 SV=2
Length = 339
Score = 83.6 bits (205), Expect = 6e-15, Method: Composition-based stats.
Identities = 34/38 (89%), Positives = 36/38 (94%)
Query: 19 SHGNYTNPCLTMHQPWASLLVYGIKRIEGRSWPAPIRG 56
S GNY NPCLTMHQPWASLLV+GIKRIEGRSWP+PIRG
Sbjct: 2 SRGNYKNPCLTMHQPWASLLVHGIKRIEGRSWPSPIRG 39
>Q0WS73_ARATH (tr|Q0WS73) Putative uncharacterized protein At2g20410
OS=Arabidopsis thaliana GN=At2g20410 PE=2 SV=1
Length = 339
Score = 83.6 bits (205), Expect = 6e-15, Method: Composition-based stats.
Identities = 34/38 (89%), Positives = 36/38 (94%)
Query: 19 SHGNYTNPCLTMHQPWASLLVYGIKRIEGRSWPAPIRG 56
S GNY NPCLTMHQPWASLLV+GIKRIEGRSWP+PIRG
Sbjct: 2 SRGNYKNPCLTMHQPWASLLVHGIKRIEGRSWPSPIRG 39
>D7L3N0_ARALY (tr|D7L3N0) Putative uncharacterized protein OS=Arabidopsis
lyrata subsp. lyrata GN=ARALYDRAFT_900393 PE=4 SV=1
Length = 327
Score = 83.6 bits (205), Expect = 7e-15, Method: Composition-based stats.
Identities = 34/38 (89%), Positives = 36/38 (94%)
Query: 19 SHGNYTNPCLTMHQPWASLLVYGIKRIEGRSWPAPIRG 56
S GNY NPCLTMHQPWASLLV+GIKRIEGRSWP+PIRG
Sbjct: 2 SRGNYKNPCLTMHQPWASLLVHGIKRIEGRSWPSPIRG 39
>Q8LEZ3_ARATH (tr|Q8LEZ3) Putative uncharacterized protein OS=Arabidopsis
thaliana PE=2 SV=1
Length = 339
Score = 83.6 bits (205), Expect = 7e-15, Method: Composition-based stats.
Identities = 34/38 (89%), Positives = 36/38 (94%)
Query: 19 SHGNYTNPCLTMHQPWASLLVYGIKRIEGRSWPAPIRG 56
S GNY NPCLTMHQPWASLLV+GIKRIEGRSWP+PIRG
Sbjct: 2 SRGNYKNPCLTMHQPWASLLVHGIKRIEGRSWPSPIRG 39
>D7SZF6_VITVI (tr|D7SZF6) Whole genome shotgun sequence of line PN40024,
scaffold_49.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00027798001 PE=4 SV=1
Length = 234
Score = 83.2 bits (204), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 35/39 (89%), Positives = 38/39 (97%)
Query: 18 RSHGNYTNPCLTMHQPWASLLVYGIKRIEGRSWPAPIRG 56
RS GNYTNPCLT+HQPWASLLVYGIKR+EGRSWPAP+RG
Sbjct: 4 RSKGNYTNPCLTLHQPWASLLVYGIKRVEGRSWPAPLRG 42
>D7TXG3_VITVI (tr|D7TXG3) Whole genome shotgun sequence of line PN40024,
scaffold_81.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00036192001 PE=4 SV=1
Length = 316
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/39 (89%), Positives = 36/39 (92%)
Query: 18 RSHGNYTNPCLTMHQPWASLLVYGIKRIEGRSWPAPIRG 56
R+ NY NPCLTMHQPWASLLVYGIKRIEGRSWPAPIRG
Sbjct: 4 RNSWNYRNPCLTMHQPWASLLVYGIKRIEGRSWPAPIRG 42
>B9IP95_POPTR (tr|B9IP95) Predicted protein (Fragment) OS=Populus trichocarpa
GN=POPTRDRAFT_248095 PE=4 SV=1
Length = 221
Score = 77.4 bits (189), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/36 (94%), Positives = 34/36 (94%)
Query: 21 GNYTNPCLTMHQPWASLLVYGIKRIEGRSWPAPIRG 56
GNYTNPCLTMHQPWASLLVYGIKRIEGRSW PIRG
Sbjct: 1 GNYTNPCLTMHQPWASLLVYGIKRIEGRSWTTPIRG 36
>C6TBK7_SOYBN (tr|C6TBK7) Putative uncharacterized protein (Fragment)
OS=Glycine max PE=2 SV=1
Length = 215
Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/36 (91%), Positives = 34/36 (94%)
Query: 21 GNYTNPCLTMHQPWASLLVYGIKRIEGRSWPAPIRG 56
GNY NPCLTMHQPWASLLVYGIKR+EGRSWPAPI G
Sbjct: 9 GNYRNPCLTMHQPWASLLVYGIKRVEGRSWPAPITG 44
>B9I5M9_POPTR (tr|B9I5M9) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_571088 PE=4 SV=1
Length = 236
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/35 (94%), Positives = 34/35 (97%)
Query: 22 NYTNPCLTMHQPWASLLVYGIKRIEGRSWPAPIRG 56
NY+NPCLTMHQPWASLLVYGIKRIEGRSW APIRG
Sbjct: 13 NYSNPCLTMHQPWASLLVYGIKRIEGRSWTAPIRG 47
>B4FV64_MAIZE (tr|B4FV64) Putative uncharacterized protein OS=Zea mays PE=2
SV=1
Length = 339
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 33/36 (91%)
Query: 21 GNYTNPCLTMHQPWASLLVYGIKRIEGRSWPAPIRG 56
G + NPCLTMHQPWASLLV+GIKR+EGRSWP+PI G
Sbjct: 26 GYHGNPCLTMHQPWASLLVHGIKRVEGRSWPSPITG 61
>B6T6J6_MAIZE (tr|B6T6J6) Putative uncharacterized protein OS=Zea mays PE=2
SV=1
Length = 315
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 33/36 (91%)
Query: 21 GNYTNPCLTMHQPWASLLVYGIKRIEGRSWPAPIRG 56
G + NPCLTMHQPWASLLV+GIKR+EGRSWP+PI G
Sbjct: 26 GYHGNPCLTMHQPWASLLVHGIKRVEGRSWPSPITG 61
>B9SZW5_RICCO (tr|B9SZW5) Putative uncharacterized protein OS=Ricinus communis
GN=RCOM_1006990 PE=4 SV=1
Length = 213
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/39 (74%), Positives = 35/39 (89%)
Query: 18 RSHGNYTNPCLTMHQPWASLLVYGIKRIEGRSWPAPIRG 56
++ + TN CLT+HQPWASLLV+GIKR+EGRSWPAPIRG
Sbjct: 4 KNTKHCTNSCLTLHQPWASLLVHGIKRVEGRSWPAPIRG 42
>B9F805_ORYSJ (tr|B9F805) Putative uncharacterized protein OS=Oryza sativa
subsp. japonica GN=OsJ_13454 PE=4 SV=1
Length = 362
Score = 67.0 bits (162), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 31/32 (96%)
Query: 25 NPCLTMHQPWASLLVYGIKRIEGRSWPAPIRG 56
NPCLTMHQPWASLLV+GIKR+EGRSWP+P+ G
Sbjct: 11 NPCLTMHQPWASLLVHGIKRVEGRSWPSPLTG 42
>Q7Y1E7_ORYSJ (tr|Q7Y1E7) Putative uncharacterized protein OSJNBa0033P04.18
OS=Oryza sativa subsp. japonica GN=OSJNBa0033P04.18
PE=4 SV=1
Length = 360
Score = 67.0 bits (162), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 31/32 (96%)
Query: 25 NPCLTMHQPWASLLVYGIKRIEGRSWPAPIRG 56
NPCLTMHQPWASLLV+GIKR+EGRSWP+P+ G
Sbjct: 11 NPCLTMHQPWASLLVHGIKRVEGRSWPSPLTG 42
>B8AP93_ORYSI (tr|B8AP93) Putative uncharacterized protein OS=Oryza sativa
subsp. indica GN=OsI_14430 PE=4 SV=1
Length = 261
Score = 66.6 bits (161), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 32/36 (88%)
Query: 21 GNYTNPCLTMHQPWASLLVYGIKRIEGRSWPAPIRG 56
G NPCLTMHQPWASLLV+GIKR+EGRSWP+P+ G
Sbjct: 7 GRLRNPCLTMHQPWASLLVHGIKRVEGRSWPSPLTG 42
>C7J057_ORYSJ (tr|C7J057) Os03g0860000 protein OS=Oryza sativa subsp. japonica
GN=Os03g0860000 PE=4 SV=1
Length = 134
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 31/32 (96%)
Query: 25 NPCLTMHQPWASLLVYGIKRIEGRSWPAPIRG 56
NPCLTMHQPWASLLV+GIKR+EGRSWP+P+ G
Sbjct: 11 NPCLTMHQPWASLLVHGIKRVEGRSWPSPLTG 42
>D2GYR7_AILME (tr|D2GYR7) Putative uncharacterized protein (Fragment)
OS=Ailuropoda melanoleuca GN=PANDA_002163 PE=4 SV=1
Length = 561
Score = 60.1 bits (144), Expect = 8e-08, Method: Composition-based stats.
Identities = 24/30 (80%), Positives = 26/30 (86%)
Query: 27 CLTMHQPWASLLVYGIKRIEGRSWPAPIRG 56
CL+MHQPWASLLV GIKR+EGRSW P RG
Sbjct: 436 CLSMHQPWASLLVRGIKRVEGRSWYTPHRG 465
>A5YBM5_HORSE (tr|A5YBM5) Thyroid hormone receptor interactor 4 (Fragment)
OS=Equus caballus GN=TRIP4 PE=2 SV=1
Length = 562
Score = 59.7 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/30 (80%), Positives = 26/30 (86%)
Query: 27 CLTMHQPWASLLVYGIKRIEGRSWPAPIRG 56
CL+MHQPWASLLV GIKR+EGRSW P RG
Sbjct: 425 CLSMHQPWASLLVRGIKRVEGRSWYTPHRG 454
>Q2KIC4_BOVIN (tr|Q2KIC4) Thyroid hormone receptor interactor 4 OS=Bos taurus
GN=TRIP4 PE=2 SV=1
Length = 579
Score = 58.5 bits (140), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/30 (76%), Positives = 26/30 (86%)
Query: 27 CLTMHQPWASLLVYGIKRIEGRSWPAPIRG 56
CL+MHQPWASLLV GIKR+EGR+W P RG
Sbjct: 433 CLSMHQPWASLLVRGIKRVEGRNWYTPHRG 462
>D7FGX7_ECTSI (tr|D7FGX7) Putative uncharacterized protein OS=Ectocarpus
siliculosus GN=Esi_0102_0075 PE=4 SV=1
Length = 185
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 28/38 (73%)
Query: 19 SHGNYTNPCLTMHQPWASLLVYGIKRIEGRSWPAPIRG 56
S N CLTMHQPWASLLV GIKR+EGRSWP RG
Sbjct: 16 STARPKNVCLTMHQPWASLLVAGIKRVEGRSWPTEHRG 53
>B5DEP5_RAT (tr|B5DEP5) RCG58191 OS=Rattus norvegicus GN=Trip4 PE=2 SV=1
Length = 581
Score = 57.8 bits (138), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/30 (76%), Positives = 26/30 (86%)
Query: 27 CLTMHQPWASLLVYGIKRIEGRSWPAPIRG 56
CL++HQPWASLLV GIKR+EGRSW P RG
Sbjct: 436 CLSVHQPWASLLVKGIKRVEGRSWYTPHRG 465
>D3ZEX0_RAT (tr|D3ZEX0) Putative uncharacterized protein Trip4 OS=Rattus
norvegicus GN=Trip4 PE=4 SV=1
Length = 539
Score = 57.4 bits (137), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/30 (76%), Positives = 26/30 (86%)
Query: 27 CLTMHQPWASLLVYGIKRIEGRSWPAPIRG 56
CL++HQPWASLLV GIKR+EGRSW P RG
Sbjct: 436 CLSVHQPWASLLVKGIKRVEGRSWYTPHRG 465
>A7RPW2_NEMVE (tr|A7RPW2) Predicted protein OS=Nematostella vectensis
GN=v1g180626 PE=4 SV=1
Length = 515
Score = 57.0 bits (136), Expect = 7e-07, Method: Composition-based stats.
Identities = 23/30 (76%), Positives = 25/30 (83%)
Query: 27 CLTMHQPWASLLVYGIKRIEGRSWPAPIRG 56
CL+MHQPWASLLV GIKR+EGRSW RG
Sbjct: 372 CLSMHQPWASLLVLGIKRVEGRSWYTAHRG 401
>A8J996_CHLRE (tr|A8J996) Predicted protein OS=Chlamydomonas reinhardtii
GN=CHLREDRAFT_177055 PE=4 SV=1
Length = 297
Score = 55.8 bits (133), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/29 (79%), Positives = 26/29 (89%)
Query: 28 LTMHQPWASLLVYGIKRIEGRSWPAPIRG 56
LTMHQPWASLLVYG+KRIEGR+W + RG
Sbjct: 8 LTMHQPWASLLVYGLKRIEGRTWDSTHRG 36