Jatropha Genome Database

JcCB0779721.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0779721.10 - phase: 0 
         (92 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9RAI4_RICCO (tr|B9RAI4) WD-repeat protein, putative OS=Ricinus ...   145   2e-33
B9IF84_POPTR (tr|B9IF84) Predicted protein OS=Populus trichocarp...   137   4e-31
A5C3S0_VITVI (tr|A5C3S0) Putative uncharacterized protein OS=Vit...   125   1e-27
D7SGV9_VITVI (tr|D7SGV9) Whole genome shotgun sequence of line P...   124   3e-27
A9RNR9_PHYPA (tr|A9RNR9) Predicted protein (Fragment) OS=Physcom...    59   2e-07
D7LSF3_ARALY (tr|D7LSF3) Putative uncharacterized protein OS=Ara...    58   4e-07
Q9M3B4_ARATH (tr|Q9M3B4) At3g49180 OS=Arabidopsis thaliana GN=At...    54   5e-06
Q8LBC4_ARATH (tr|Q8LBC4) Putative uncharacterized protein OS=Ara...    54   6e-06
B9R7A8_RICCO (tr|B9R7A8) WD-repeat protein, putative OS=Ricinus ...    54   7e-06

>B9RAI4_RICCO (tr|B9RAI4) WD-repeat protein, putative OS=Ricinus communis
          GN=RCOM_1506640 PE=4 SV=1
          Length = 471

 Score =  145 bits (365), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 65/75 (86%), Positives = 70/75 (93%)

Query: 1  MGKGREALVACSDRSMGTGITVWDLETGDRLMHIPTCASPAHGLLCLRDQFLVASQVNKH 60
          MG+GREALV CSDRSMGTGI++WD+ETGDRLMHIPTCAS  HGLLCL+DQFLVASQVNKH
Sbjct: 1  MGRGREALVGCSDRSMGTGISIWDVETGDRLMHIPTCASAPHGLLCLKDQFLVASQVNKH 60

Query: 61 GSVGGGAIFIWQLNK 75
          GSVGGGAIF W LNK
Sbjct: 61 GSVGGGAIFTWPLNK 75


>B9IF84_POPTR (tr|B9IF84) Predicted protein OS=Populus trichocarpa
          GN=POPTRDRAFT_575328 PE=4 SV=1
          Length = 401

 Score =  137 bits (345), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 64/78 (82%), Positives = 68/78 (87%), Gaps = 3/78 (3%)

Query: 1  MGKGR---EALVACSDRSMGTGITVWDLETGDRLMHIPTCASPAHGLLCLRDQFLVASQV 57
          MGKG    E LV CSDR+MGTGI +WD+ETGDR+MHIPTCASP HGLLCLRDQFLVASQV
Sbjct: 1  MGKGNGSDEVLVVCSDRNMGTGIAMWDMETGDRIMHIPTCASPLHGLLCLRDQFLVASQV 60

Query: 58 NKHGSVGGGAIFIWQLNK 75
          NKHGSVGGGAIF W LNK
Sbjct: 61 NKHGSVGGGAIFTWSLNK 78


>A5C3S0_VITVI (tr|A5C3S0) Putative uncharacterized protein OS=Vitis vinifera
          GN=VITISV_026009 PE=4 SV=1
          Length = 503

 Score =  125 bits (315), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 55/72 (76%), Positives = 65/72 (90%)

Query: 4  GREALVACSDRSMGTGITVWDLETGDRLMHIPTCASPAHGLLCLRDQFLVASQVNKHGSV 63
          GREALV CSDRSM  GITVWD+ +GD+L+HIPTCA+  HGLLCLR+QFLVASQ+++HGS+
Sbjct: 6  GREALVVCSDRSMSVGITVWDMVSGDQLLHIPTCAASPHGLLCLREQFLVASQIHRHGSL 65

Query: 64 GGGAIFIWQLNK 75
          GGGAIFIW LNK
Sbjct: 66 GGGAIFIWPLNK 77


>D7SGV9_VITVI (tr|D7SGV9) Whole genome shotgun sequence of line PN40024,
          scaffold_0.assembly12x (Fragment) OS=Vitis vinifera
          GN=VIT_00008513001 PE=4 SV=1
          Length = 281

 Score =  124 bits (311), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 55/72 (76%), Positives = 65/72 (90%)

Query: 4  GREALVACSDRSMGTGITVWDLETGDRLMHIPTCASPAHGLLCLRDQFLVASQVNKHGSV 63
          GREALV CSDRSM  GITVWD+ +GD+L+HIPTCA+  HGLLCLR+QFLVASQ+++HGS+
Sbjct: 6  GREALVVCSDRSMSVGITVWDMVSGDQLLHIPTCAASPHGLLCLREQFLVASQIHRHGSL 65

Query: 64 GGGAIFIWQLNK 75
          GGGAIFIW LNK
Sbjct: 66 GGGAIFIWPLNK 77


>A9RNR9_PHYPA (tr|A9RNR9) Predicted protein (Fragment) OS=Physcomitrella patens
          subsp. patens GN=PHYPADRAFT_117083 PE=4 SV=1
          Length = 280

 Score = 58.5 bits (140), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/71 (45%), Positives = 42/71 (59%), Gaps = 3/71 (4%)

Query: 6  EALVACSDRSMGTGITVWDLETGDRLMHIPTCASPAHGLLCLRDQFLVASQVNK-HGSVG 64
          E +V CS      G+TVWDL +G  L H+ +CASP + L  +   FL A+QV K  G  G
Sbjct: 6  EVVVVCSGAD--AGVTVWDLHSGLVLSHLRSCASPRNALAPVGSHFLAAAQVPKPSGGAG 63

Query: 65 GGAIFIWQLNK 75
          GGAI+ W  +K
Sbjct: 64 GGAIYFWAWHK 74


>D7LSF3_ARALY (tr|D7LSF3) Putative uncharacterized protein OS=Arabidopsis
          lyrata subsp. lyrata GN=ARALYDRAFT_485276 PE=4 SV=1
          Length = 438

 Score = 57.8 bits (138), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 1/61 (1%)

Query: 15 SMGTGITVWDLETGDRLMHIPTCASPAHGLLCLRDQFLVASQVNKHGSVGGGAIFIWQLN 74
          S+  GI  WDL+TG   +    CASPAHGL  + ++FL +SQ+ K  S   G+IF W   
Sbjct: 10 SIDEGIGSWDLKTGKEQLRFKQCASPAHGLTAVGEKFLASSQLRKE-STSSGSIFYWSWT 68

Query: 75 K 75
          K
Sbjct: 69 K 69


>Q9M3B4_ARATH (tr|Q9M3B4) At3g49180 OS=Arabidopsis thaliana GN=At3g49180 PE=2
          SV=1
          Length = 438

 Score = 53.9 bits (128), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 2/68 (2%)

Query: 8  LVACSDRSMGTGITVWDLETGDRLMHIPTCASPAHGLLCLRDQFLVASQVNKHGSVGGGA 67
          +   +  S+  GI  WDL+TG   +    CASPAHGL  + ++FL +SQ++   +   G+
Sbjct: 3  ITVIASSSIDEGIGSWDLKTGTEQLQFKPCASPAHGLTAVGEKFLASSQLSARNT--SGS 60

Query: 68 IFIWQLNK 75
          IF W   K
Sbjct: 61 IFYWSWTK 68


>Q8LBC4_ARATH (tr|Q8LBC4) Putative uncharacterized protein OS=Arabidopsis
          thaliana PE=2 SV=1
          Length = 438

 Score = 53.9 bits (128), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 2/61 (3%)

Query: 15 SMGTGITVWDLETGDRLMHIPTCASPAHGLLCLRDQFLVASQVNKHGSVGGGAIFIWQLN 74
          S+  GI  WDL+TG   +    CASPAHGL  + ++FL +SQ++   +   G+IF W   
Sbjct: 10 SIDEGIGSWDLKTGTEQLQFKPCASPAHGLTAVGEKFLASSQLSARNT--SGSIFYWSWT 67

Query: 75 K 75
          K
Sbjct: 68 K 68


>B9R7A8_RICCO (tr|B9R7A8) WD-repeat protein, putative OS=Ricinus communis
          GN=RCOM_1590080 PE=4 SV=1
          Length = 452

 Score = 53.5 bits (127), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 3/71 (4%)

Query: 5  REALVACSDRSMGTGITVWDLETGDRLMHIPTCASPAHGLLCLRDQFLVASQVNKHGSVG 64
           E L+A S  S+  GI  WDL+TG   +   +CASP HGL C+  +FL ASQ+ +     
Sbjct: 3  EELLLASS--SIDGGIGCWDLQTGAEHLRYKSCASPPHGLTCVGSRFLAASQL-RDSHAS 59

Query: 65 GGAIFIWQLNK 75
           G+I  W  +K
Sbjct: 60 SGSIVYWSWSK 70