Jatropha Genome Database

JcCB0768001.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0768001.10 - phase: 0 
         (66 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

C7F6Z1_9ROSI (tr|C7F6Z1) Zeta carotene desaturase OS=Jatropha cu...   122   2e-26
B9RES0_RICCO (tr|B9RES0) Zeta-carotene desaturase, chloroplast, ...    90   7e-17
B9I8C7_POPTR (tr|B9I8C7) Predicted protein OS=Populus trichocarp...    65   3e-09

>C7F6Z1_9ROSI (tr|C7F6Z1) Zeta carotene desaturase OS=Jatropha curcas PE=2 SV=1
          Length = 586

 Score =  122 bits (305), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 60/66 (90%), Positives = 62/66 (93%)

Query: 1  MASSILFPTNSITGTRSKNPGFLPSCGRRSVAQVVRTQRLSFVRSALDSLETKVSDMSVN 60
          MASSILFPTNSITGTRSKNPGFLPSCGRRSVAQVVRTQRLSFVR+ALDSLETKVSDMSVN
Sbjct: 1  MASSILFPTNSITGTRSKNPGFLPSCGRRSVAQVVRTQRLSFVRAALDSLETKVSDMSVN 60

Query: 61 GTSLIF 66
              +F
Sbjct: 61 APKGLF 66


>B9RES0_RICCO (tr|B9RES0) Zeta-carotene desaturase, chloroplast, putative
          OS=Ricinus communis GN=RCOM_1428040 PE=4 SV=1
          Length = 964

 Score = 90.1 bits (222), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 49/67 (73%), Positives = 52/67 (77%), Gaps = 1/67 (1%)

Query: 1  MASSILFPTNSITGTRSKNPGFLPSCGRRS-VAQVVRTQRLSFVRSALDSLETKVSDMSV 59
          MASSIL P NS+ GTR + PGFL S  RRS  AQVVRTQRL FVRSALDSLETKVSDMSV
Sbjct: 2  MASSILLPANSVAGTRRRTPGFLLSGDRRSSTAQVVRTQRLFFVRSALDSLETKVSDMSV 61

Query: 60 NGTSLIF 66
          N    +F
Sbjct: 62 NAPKGLF 68


>B9I8C7_POPTR (tr|B9I8C7) Predicted protein OS=Populus trichocarpa
          GN=POPTRDRAFT_806861 PE=4 SV=1
          Length = 582

 Score = 64.7 bits (156), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 45/69 (65%), Gaps = 10/69 (14%)

Query: 1  MASSILFPTNSITGTRSKN--PGFLPSCGRRSVAQV-VRTQRLSFVRSALDSLETKVSDM 57
          MAS ILFP  S+TGTRS+   PG       RSV QV  R QRL  VRSALDSLET VSDM
Sbjct: 1  MASLILFPAKSVTGTRSETSPPG-------RSVVQVGFRNQRLFTVRSALDSLETNVSDM 53

Query: 58 SVNGTSLIF 66
          SVN    +F
Sbjct: 54 SVNAPKGLF 62