Jatropha Genome Database

JcCB0698361.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0698361.10 - phase: 0 
         (134 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9GNL9_POPTR (tr|B9GNL9) Predicted protein OS=Populus trichocarp...   149   7e-35
B9R6V9_RICCO (tr|B9R6V9) Putative uncharacterized protein OS=Ric...   144   4e-33
D7TRE5_VITVI (tr|D7TRE5) Whole genome shotgun sequence of line P...    80   7e-14
B9IBM4_POPTR (tr|B9IBM4) Predicted protein OS=Populus trichocarp...    77   9e-13
B9SCK0_RICCO (tr|B9SCK0) Putative uncharacterized protein OS=Ric...    65   2e-09

>B9GNL9_POPTR (tr|B9GNL9) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_551755 PE=4 SV=1
          Length = 605

 Score =  149 bits (377), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 90/130 (69%), Positives = 99/130 (76%), Gaps = 9/130 (6%)

Query: 1   MDFGV-VGLEELVGSDNVSSGFASLASSDRETKQELYGSGFLKQERSDTTEHDWRSSKLS 59
           MDFGV VGL+ LVGSD  +SGFASLASSD E KQ+ YGSGFLKQERS   + DWR+SKL+
Sbjct: 1   MDFGVQVGLDGLVGSDTSNSGFASLASSDPEAKQK-YGSGFLKQERSAAADDDWRNSKLA 59

Query: 60  KTESMLLPQRNT-LLKSNT----TDGHRQQQMLSFSCPKSEGLTVERSPRNASFPSFHLS 114
           KTESMLL QRNT LLKS+     TDG +QQQMLSFSCPKS   + ERS  NA  P FHL 
Sbjct: 60  KTESMLLDQRNTFLLKSSNNSLFTDGQQQQQMLSFSCPKSAS-SGERSSPNAMLPYFHL- 117

Query: 115 TSSAYNRRTG 124
           TSSA NR TG
Sbjct: 118 TSSACNRNTG 127


>B9R6V9_RICCO (tr|B9R6V9) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_1586340 PE=4 SV=1
          Length = 617

 Score =  144 bits (362), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 89/141 (63%), Positives = 99/141 (70%), Gaps = 22/141 (15%)

Query: 1   MDFGVVGLEELVGSDNV------SSGFASLA---SSDRETKQELYGSGFLKQERSDTT-- 49
           MDFGVVG E LVGSD        SSGFASLA   SSD ETKQ+ YGSGFLKQERS TT  
Sbjct: 1   MDFGVVGFEGLVGSDTTTTTTTGSSGFASLAAAPSSDPETKQKWYGSGFLKQERSSTTTN 60

Query: 50  EHDWRSSKLSKTESMLLPQRN-TLLKSNTTD---GHRQQQMLSFSCPKSEGLTVERSPRN 105
           E DWRSSKLSKTESMLL  R+ TLLKSN T     + QQQMLSFSCPK E       P +
Sbjct: 61  EDDWRSSKLSKTESMLLSHRSTTLLKSNATSLFTDNGQQQMLSFSCPKPE-------PPS 113

Query: 106 ASFPSFHLSTSSAYNRRTGTL 126
           ++ P FHL++S+AYNR TG +
Sbjct: 114 STLPYFHLTSSAAYNRNTGYM 134


>D7TRE5_VITVI (tr|D7TRE5) Whole genome shotgun sequence of line PN40024,
           scaffold_494.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00007165001 PE=4 SV=1
          Length = 558

 Score = 80.1 bits (196), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 59/141 (41%), Positives = 78/141 (55%), Gaps = 23/141 (16%)

Query: 1   MDFGVVGLEELVGSDNVSSGFASLASSDRETKQELYGSGFLKQERSDTTEHDWRSSKLSK 60
           MDFG+VGLE LVG ++V    A    ++ ETKQ   GSG  KQE S + + DW  SK+++
Sbjct: 12  MDFGLVGLEGLVGPEDV----APSQVAETETKQMGLGSGLGKQEISGSLQDDWADSKMAR 67

Query: 61  TE------SMLLPQRNTLLKSNTT----DGHRQQQMLSFSCPKSE-------GLTVERSP 103
           T+      +M L Q  T L  + +    DG  QQ MLSFS PKSE       G  V+R  
Sbjct: 68  TDDFGASITMSL-QHGTSLLRSNSLLSDDGGAQQHMLSFSSPKSEMSFLGKDGRLVDRGA 126

Query: 104 RNASFPSFHLSTSSAYNRRTG 124
           +  +FP ++  T SAYNR  G
Sbjct: 127 KTTAFP-YYQPTPSAYNRNAG 146


>B9IBM4_POPTR (tr|B9IBM4) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_774124 PE=4 SV=1
          Length = 607

 Score = 76.6 bits (187), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 83/145 (57%), Gaps = 23/145 (15%)

Query: 1   MDFGVVGLEELVGSDNVSSGFASLASSDRETKQELYGSGFLKQERSDTTEHD--WRSSKL 58
           MDFGV+GLE LVG +  S   + +  S  ETK ++ GS   K+ERS ++  D  WR+SK+
Sbjct: 1   MDFGVLGLEGLVGPETSSEAPSHV--SPPETKPKILGSVLSKRERSASSAQDDYWRTSKM 58

Query: 59  SK------TESMLLPQRNTLLKSN---TTDGHRQQQMLSFSCPKSE--------GLTVER 101
            K      T++M L Q  +LL+SN   + D  +Q+ M+SFS P+ E        G  VER
Sbjct: 59  PKNDDFSVTKTMSLHQPTSLLRSNYMLSDDSRQQEHMMSFSSPRPETTPFLSKDGELVER 118

Query: 102 SPRNASFPSF--HLSTSSAYNRRTG 124
           S +N +  SF  H +T+S+Y R  G
Sbjct: 119 STQNHTALSFRYHQNTASSYIRSAG 143


>B9SCK0_RICCO (tr|B9SCK0) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_0474850 PE=4 SV=1
          Length = 233

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/115 (48%), Positives = 64/115 (55%), Gaps = 31/115 (26%)

Query: 12  VGSDNVSSGFASLASSDRETKQELYGSGFLKQERSDTTEH-DWRSSKLSKTESMLLPQRN 70
           VGSDN S    SLA SD   KQ+ Y SGF+KQERS  +E  D  S KL K    LLPQR+
Sbjct: 6   VGSDNTSISIDSLAGSD---KQDGYISGFVKQERSGISEEIDLSSFKLPK----LLPQRD 58

Query: 71  TLLKSNTTDGHRQQQMLSFSCPKSEGLT--VERSPRNASFPSFHLSTSSAYNRRT 123
           TLL                   KSE LT  VERS +NAS  +FHL  +SAY+R T
Sbjct: 59  TLL-------------------KSEDLTSVVERSSQNASSSAFHL--TSAYHRST 92