Jatropha Genome Database
- JcCB0631101.10
BLASTP 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0631101.10 + phase: 0 /pseudo
(129 letters)
Database: trembl
11,636,205 sequences; 3,746,823,912 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
B9RAX5_RICCO (tr|B9RAX5) Nucleic acid binding protein, putative ... 92 1e-17
B9GSH2_POPTR (tr|B9GSH2) Predicted protein OS=Populus trichocarp... 91 5e-17
D7SHL9_VITVI (tr|D7SHL9) Whole genome shotgun sequence of line P... 88 2e-16
Q0WTF7_ARATH (tr|Q0WTF7) Putative uncharacterized protein OS=Ara... 73 9e-12
Q5VQM8_ORYSJ (tr|Q5VQM8) Putative uncharacterized protein P0583G... 67 5e-10
B9ET31_ORYSJ (tr|B9ET31) Putative uncharacterized protein OS=Ory... 67 5e-10
B8ADG7_ORYSI (tr|B8ADG7) Putative uncharacterized protein OS=Ory... 67 5e-10
C5XNG2_SORBI (tr|C5XNG2) Putative uncharacterized protein Sb03g0... 65 2e-09
C0PEC2_MAIZE (tr|C0PEC2) Putative uncharacterized protein OS=Zea... 64 6e-09
O49491_ARATH (tr|O49491) Putative uncharacterized protein AT4g34... 57 5e-07
D7MFR3_ARALY (tr|D7MFR3) D111/G-patch domain-containing protein ... 55 2e-06
A9U175_PHYPA (tr|A9U175) Predicted protein OS=Physcomitrella pat... 54 5e-06
>B9RAX5_RICCO (tr|B9RAX5) Nucleic acid binding protein, putative OS=Ricinus
communis GN=RCOM_1509480 PE=4 SV=1
Length = 417
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 38/50 (76%), Positives = 47/50 (94%)
Query: 53 DDCSFIWDETSQLYFHSRSGIYHDPNGGWYYSSRDGLYYKFENGSYVLLE 102
++CSF+WD+++QLYFH+ SG YHDP+ GWY+SSRDGLYYKFENGSYVLLE
Sbjct: 15 NNCSFVWDDSTQLYFHASSGFYHDPSAGWYFSSRDGLYYKFENGSYVLLE 64
>B9GSH2_POPTR (tr|B9GSH2) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_755634 PE=4 SV=1
Length = 474
Score = 90.5 bits (223), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/54 (77%), Positives = 48/54 (88%), Gaps = 1/54 (1%)
Query: 53 DDCSFIWDETSQLYFHSRSGIYHDPNGGWYYSSRDGLYYKFENGSYVLLE-SDK 105
DD +F WD+T+QLYFH+ SG YHDP+ GW+YSSRDGLYYKFENGSYVLLE SDK
Sbjct: 15 DDFAFDWDQTTQLYFHASSGFYHDPSAGWFYSSRDGLYYKFENGSYVLLECSDK 68
>D7SHL9_VITVI (tr|D7SHL9) Whole genome shotgun sequence of line PN40024,
scaffold_0.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00007682001 PE=4 SV=1
Length = 483
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 45/55 (81%)
Query: 53 DDCSFIWDETSQLYFHSRSGIYHDPNGGWYYSSRDGLYYKFENGSYVLLESDKWR 107
D+ F WDE SQLYFH SG YHDPN GWYYSSRDGLYYKFE+G+YVLL+S K +
Sbjct: 10 DESIFKWDEKSQLYFHPSSGFYHDPNAGWYYSSRDGLYYKFEDGNYVLLDSQKVQ 64
>Q0WTF7_ARATH (tr|Q0WTF7) Putative uncharacterized protein OS=Arabidopsis
thaliana PE=2 SV=1
Length = 176
Score = 73.2 bits (178), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 37/50 (74%)
Query: 56 SFIWDETSQLYFHSRSGIYHDPNGGWYYSSRDGLYYKFENGSYVLLESDK 105
S++WD +QLY H SG YHDPN GWYY S+DG YYK ENG YV LE D+
Sbjct: 16 SYVWDSDTQLYIHHSSGFYHDPNAGWYYCSKDGRYYKHENGEYVPLEYDE 65
>Q5VQM8_ORYSJ (tr|Q5VQM8) Putative uncharacterized protein P0583G08.4 OS=Oryza
sativa subsp. japonica GN=P0583G08.4 PE=4 SV=1
Length = 450
Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 34/43 (79%)
Query: 57 FIWDETSQLYFHSRSGIYHDPNGGWYYSSRDGLYYKFENGSYV 99
F WDE SQLY+H+ +G YHDP GWYYS RDG YY ++NG+YV
Sbjct: 18 FEWDEDSQLYYHASTGFYHDPVAGWYYSGRDGQYYIYDNGNYV 60
>B9ET31_ORYSJ (tr|B9ET31) Putative uncharacterized protein OS=Oryza sativa
subsp. japonica GN=OsJ_00539 PE=4 SV=1
Length = 462
Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 34/43 (79%)
Query: 57 FIWDETSQLYFHSRSGIYHDPNGGWYYSSRDGLYYKFENGSYV 99
F WDE SQLY+H+ +G YHDP GWYYS RDG YY ++NG+YV
Sbjct: 18 FEWDEDSQLYYHASTGFYHDPVAGWYYSGRDGQYYIYDNGNYV 60
>B8ADG7_ORYSI (tr|B8ADG7) Putative uncharacterized protein OS=Oryza sativa
subsp. indica GN=OsI_00572 PE=4 SV=1
Length = 462
Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 34/43 (79%)
Query: 57 FIWDETSQLYFHSRSGIYHDPNGGWYYSSRDGLYYKFENGSYV 99
F WDE SQLY+H+ +G YHDP GWYYS RDG YY ++NG+YV
Sbjct: 18 FEWDEDSQLYYHASTGFYHDPVAGWYYSGRDGQYYIYDNGNYV 60
>C5XNG2_SORBI (tr|C5XNG2) Putative uncharacterized protein Sb03g004530 OS=Sorghum
bicolor GN=Sb03g004530 PE=4 SV=1
Length = 456
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 36/50 (72%)
Query: 55 CSFIWDETSQLYFHSRSGIYHDPNGGWYYSSRDGLYYKFENGSYVLLESD 104
F WD SQLY+H+ + YHDP GWYYSSRDG YY ++NG+Y+ L +D
Sbjct: 20 AGFEWDADSQLYYHASTAFYHDPVAGWYYSSRDGQYYIYKNGNYMPLTTD 69
>C0PEC2_MAIZE (tr|C0PEC2) Putative uncharacterized protein OS=Zea mays PE=2 SV=1
Length = 348
Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 35/48 (72%)
Query: 57 FIWDETSQLYFHSRSGIYHDPNGGWYYSSRDGLYYKFENGSYVLLESD 104
F WD SQLY+H+ + YHDP GWYYSSRD YY ++NG+Y+ L +D
Sbjct: 15 FAWDADSQLYYHASTAFYHDPVAGWYYSSRDSQYYVYKNGNYMPLTTD 62
>O49491_ARATH (tr|O49491) Putative uncharacterized protein AT4g34140
OS=Arabidopsis thaliana GN=AT4g34140 PE=2 SV=1
Length = 392
Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 28/37 (75%)
Query: 69 SRSGIYHDPNGGWYYSSRDGLYYKFENGSYVLLESDK 105
S SG YHDPN GWYY S+DG YYK ENG YV LE D+
Sbjct: 36 SNSGFYHDPNAGWYYCSKDGRYYKHENGEYVPLEYDE 72
>D7MFR3_ARALY (tr|D7MFR3) D111/G-patch domain-containing protein OS=Arabidopsis
lyrata subsp. lyrata GN=ARALYDRAFT_491257 PE=4 SV=1
Length = 440
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 31/51 (60%)
Query: 55 CSFIWDETSQLYFHSRSGIYHDPNGGWYYSSRDGLYYKFENGSYVLLESDK 105
C W + Y S SG YHDPN GWYY +DG YYK ENG YV LE D+
Sbjct: 48 CIKAWILHNLQYKISHSGFYHDPNAGWYYCIKDGRYYKHENGEYVPLEYDE 98
>A9U175_PHYPA (tr|A9U175) Predicted protein OS=Physcomitrella patens subsp.
patens GN=PHYPADRAFT_173124 PE=4 SV=1
Length = 703
Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%)
Query: 53 DDCSFIWDETSQLYFHSRSGIYHDPNGGWYYSSRDGLYYKFENGSYVLL 101
D F++D TS LY+ + SG Y+D GWYY++ DG YY +EN +YV L
Sbjct: 23 DAPGFVFDSTSGLYYDASSGFYYDAQAGWYYNTHDGQYYIYENEAYVPL 71