Jatropha Genome Database
- JcCB0584071.10
BLASTP 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0584071.10 - phase: 1 /pseudo/partial
(304 letters)
Database: trembl
11,636,205 sequences; 3,746,823,912 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
B9RVS6_RICCO (tr|B9RVS6) Nucleic acid binding protein, putative ... 257 1e-66
B9MYC3_POPTR (tr|B9MYC3) Predicted protein OS=Populus trichocarp... 243 3e-62
A5AFC2_VITVI (tr|A5AFC2) Putative uncharacterized protein OS=Vit... 229 2e-58
D7MN23_ARALY (tr|D7MN23) Zinc finger family protein OS=Arabidops... 87 3e-15
C0SUS5_ARATH (tr|C0SUS5) Putative uncharacterized protein At1g03... 79 7e-13
D7KD84_ARALY (tr|D7KD84) Putative uncharacterized protein OS=Ara... 74 3e-11
B8ABF4_ORYSI (tr|B8ABF4) Putative uncharacterized protein OS=Ory... 60 4e-07
C0HFE4_MAIZE (tr|C0HFE4) Putative uncharacterized protein OS=Zea... 57 2e-06
B9EUM1_ORYSJ (tr|B9EUM1) Putative uncharacterized protein OS=Ory... 57 3e-06
B9S0N0_RICCO (tr|B9S0N0) Nucleic acid binding protein, putative ... 56 4e-06
C5XJH3_SORBI (tr|C5XJH3) Putative uncharacterized protein Sb03g0... 56 5e-06
B9S7A9_RICCO (tr|B9S7A9) Nucleic acid binding protein, putative ... 55 9e-06
>B9RVS6_RICCO (tr|B9RVS6) Nucleic acid binding protein, putative OS=Ricinus
communis GN=RCOM_1172100 PE=4 SV=1
Length = 437
Score = 257 bits (657), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 170/294 (57%), Positives = 193/294 (65%), Gaps = 42/294 (14%)
Query: 29 RRDSFITHRAFCDALAEETARVNAATSINSLAAST-NFNYHLMGAPIGPNNMAQHFSSIF 87
RRDSFITHRAFCDALAEETARVNAA++IN LAA+ NFNYHLMGAPIGP NMAQHFSSIF
Sbjct: 119 RRDSFITHRAFCDALAEETARVNAASNINGLAATANNFNYHLMGAPIGP-NMAQHFSSIF 177
Query: 88 KPISSSNDQQTIDQTRRGLPLWVSQGPQGHEAIINNSIQEIHRQLGSLTSSGTIFGQDPL 147
KPI S+ND T+DQTRRGL LW+S Q HE I QEIH QLGS+ SSG IF DPL
Sbjct: 178 KPIPSNND-HTMDQTRRGLSLWMS---QSHEPI----AQEIH-QLGSMGSSGAIFHHDPL 228
Query: 148 -----VSSSDQYHQINWPKIFGNNKQISSNNVHQEELTSTT-SLPLNE-----AAVQLAS 196
SS YH ++WP IFG +K S+N H EELTSTT SLPLN AAVQL S
Sbjct: 229 NNSCSNSSPTDYH-LSWP-IFG-SKLSSTNAHHHEELTSTTSSLPLNNVKEAAAAVQLVS 285
Query: 197 VPSLYSGXXXXXXXXXXXXXXXXXXXXLLQKAAQIGATSTDPSFLGSFGLKCSSNG---Q 253
VPSLYS LLQKAAQIGATSTDP+FLGSFGLK S+N Q
Sbjct: 286 VPSLYS---TQQQPNQTAPSANMSATALLQKAAQIGATSTDPTFLGSFGLKSSTNNSQVQ 342
Query: 254 IQEGNKFCGL-YGANNLDLDLVLDHQMQMFPATKTAKSND--RMNQKALYVGGG 304
Q NKFCGL YG+N +++ ++ +ND R+NQ +Y+ G
Sbjct: 343 DQGSNKFCGLIYGSNPTITNIIASDHVE--------NNNDISRLNQLQMYMPSG 388
>B9MYC3_POPTR (tr|B9MYC3) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_594620 PE=4 SV=1
Length = 479
Score = 243 bits (619), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 156/277 (56%), Positives = 183/277 (66%), Gaps = 37/277 (13%)
Query: 29 RRDSFITHRAFCDALAEETARVNAATSINSLAASTNFNYHLMGAPIGPNNMAQHFSSIFK 88
RRDSFITHRAFCDALAEETARVNA +SIN+L A + NYHLMG P+GP NMAQHFSSIFK
Sbjct: 179 RRDSFITHRAFCDALAEETARVNAVSSINNLTAGS-INYHLMGNPLGP-NMAQHFSSIFK 236
Query: 89 PISSSNDQQTIDQTRRGLPLWVSQG-PQGHEAIINNSIQEIHRQLGSLTSSGTIFGQDPL 147
PI SSND QT + G+ LW++QG PQ EA++ N+IQEIH QL S SSG +FG
Sbjct: 237 PI-SSNDHQT---RQGGVSLWMNQGVPQVSEALMGNNIQEIH-QLRSANSSGAMFGDLLA 291
Query: 148 VSSS----DQYHQINWPKIFGNNKQISSNNVHQEELTSTTSLPLNE-----AAVQLASVP 198
VS S ++Q NWP +FGN +ISSNN H EELTST LPL AA QLASVP
Sbjct: 292 VSCSHAPPSDHYQFNWP-VFGN--KISSNNAH-EELTSTLVLPLTNVKEAAAASQLASVP 347
Query: 199 SLYSGXXXXXXXXXXXXXXXXXXXXLLQKAAQIGATSTDPSFLGSFGLKCSSNGQIQEGN 258
SLYS LLQKAAQIGATSTDPSFLGSF LK S+ ++Q+GN
Sbjct: 348 SLYS---TQQQQSHQTTSANMSATALLQKAAQIGATSTDPSFLGSFALK-SNAKKVQDGN 403
Query: 259 KFCGLYGANNLDLDLVLD------------HQMQMFP 283
KFCGLYG++ + + D +Q+QM+P
Sbjct: 404 KFCGLYGSSPVSTNPASDVENSGSDQISSLNQLQMYP 440
>A5AFC2_VITVI (tr|A5AFC2) Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_003666 PE=4 SV=1
Length = 403
Score = 229 bits (585), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 149/278 (53%), Positives = 183/278 (65%), Gaps = 35/278 (12%)
Query: 29 RRDSFITHRAFCDALAEETARVNAATSINSLAASTNFNYHLMGAPIGPNNMAQHFSSIFK 88
RRDSFITHRAFCDALAEETARV AA++IN + NYH MG + P +M QHFSSIFK
Sbjct: 119 RRDSFITHRAFCDALAEETARVTAASNIN----NGTINYHFMGTSLAP-SMPQHFSSIFK 173
Query: 89 PISSSNDQQTIDQTRRGLPLWVSQGPQGHEAIINNSIQEIHRQLGSLTSSGTIFGQDPLV 148
PI SSND+ T DQTRRGL LW+ QG QGHE + N +QEIH QL S S G+++ DPLV
Sbjct: 174 PI-SSNDEAT-DQTRRGLSLWMGQGSQGHETMGTN-LQEIH-QLRSSMSPGSVYA-DPLV 228
Query: 149 SSSD---QYHQINWPKIFGNNKQISSNNVHQEELTSTTSLPLNE----AAVQLASVPSLY 201
S S+ +Q++W +FG+ + SSNN +++LTS+TSLPL+ A Q+ SVPSLY
Sbjct: 229 SCSNPPPSSYQLSW--VFGSKQ--SSNNT-EDQLTSSTSLPLSNVKEAAGSQIVSVPSLY 283
Query: 202 SGXXXXXXXXXXXXXXXXXXXXLLQKAAQIGATSTDPSFLGSFGLKCSSNGQIQEGNKFC 261
S LLQKAAQ+GATS DP FLGSFGLKC S+ +Q+GNKFC
Sbjct: 284 S----SQHHSHQTPLGNMSATALLQKAAQMGATSADP-FLGSFGLKCDSS-LVQDGNKFC 337
Query: 262 GLYGANNL---DL----DLVLDHQMQMFPATKTAKSND 292
GLY AN L D+ DL +Q+QM+PA + ND
Sbjct: 338 GLYTANQLPTNDMENPKDLSTFNQLQMYPAKRRNTQND 375
>D7MN23_ARALY (tr|D7MN23) Zinc finger family protein OS=Arabidopsis lyrata subsp.
lyrata GN=ARALYDRAFT_917204 PE=4 SV=1
Length = 464
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 111/258 (43%), Gaps = 60/258 (23%)
Query: 29 RRDSFITHRAFCDALAEETARVNAATSINSLAA-----STNFNY-HLMGAPIGPNNMAQH 82
RRDSFITHRAFCDALAEETA++NA + +N LAA S N NY +LMG I P
Sbjct: 177 RRDSFITHRAFCDALAEETAKINAVSHLNGLAAAGAAGSVNLNYQYLMGTFIPP------ 230
Query: 83 FSSIFKPISSSNDQQTIDQTRRGLPLWVSQGPQGHEAIINNSIQEIHRQLGSLTSSGTIF 142
L +V Q PQ N + H Q +S
Sbjct: 231 -----------------------LQPFVPQ-PQ-----TNQNHHHQHFQPPPPSSLSLWM 261
Query: 143 GQDPLVSSSDQYHQINWPKIFGNNKQ----ISSNNVHQEELTSTTSLPLNEAAVQLASVP 198
GQD + Q +W +FGN K I +NN H E +T + + SVP
Sbjct: 262 GQD-IAPPQPQPQDYDW--VFGNAKAASACIDNNNTHDEHITQNANA--SLTTTTTLSVP 316
Query: 199 SLYSGXXXXXXXXXXXXXXXXXXXXLLQKAAQIGATST-------DPSFLGSFGLKCSSN 251
SL+S LLQKAA+IG TST +FL SF LK S
Sbjct: 317 SLFSNDQPQNANANSNVNMSATA--LLQKAAEIGVTSTTTAATNDQSTFLQSFPLKSSDQ 374
Query: 252 GQIQE-GNKFCGLYGANN 268
+ G KF L+G+NN
Sbjct: 375 TTTYDGGEKFFALFGSNN 392
>C0SUS5_ARATH (tr|C0SUS5) Putative uncharacterized protein At1g03840 (Fragment)
OS=Arabidopsis thaliana GN=At1g03840 PE=2 SV=1
Length = 506
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 131/285 (45%), Gaps = 72/285 (25%)
Query: 29 RRDSFITHRAFCDALAEETARVNAATSINSLAAS--TNFNYH-LMGAPIGPNNMAQHFSS 85
RRDSFITHRAFCDALAEETAR+NAA+ + S AA+ +N NYH LMG I ++ Q S
Sbjct: 183 RRDSFITHRAFCDALAEETARLNAASHLKSFAATAGSNLNYHYLMGTLIPSPSLPQPPSF 242
Query: 86 IFK------------PISSSN-DQQTIDQTRRGLPLWVSQGPQGHEAIINNSIQEIHRQL 132
F PI+++N D Q + + L LW H+ + +I++
Sbjct: 243 PFGPPQPQHHHHHQFPITTNNFDHQDVMKPASTLSLWSGGNINHHQQV---TIEDR---- 295
Query: 133 GSLTSSGTIFGQDPLVSSSDQYHQINWPKIFGNNKQISSNNVHQEELTSTTSLPLNEAAV 192
P D NW +FGN +NN H E +T++ SL ++ +
Sbjct: 296 ---------MAPQPHSPQED----YNW--VFGN-----ANN-HGELITTSDSLITHDNNI 334
Query: 193 QLA------------SVPSLYSGXX--XXXXXXXXXXXXXXXXXXLLQKAAQIGATST-- 236
+ SVPSL+S LLQKAAQ+GATS+
Sbjct: 335 NIVQSKENANGATSLSVPSLFSSVDQITQDANAASVAVANMSATALLQKAAQMGATSSTS 394
Query: 237 --------DPSFLGSFGLKCSSNGQIQEG--NKFCGLYGANNLDL 271
++L SF K SN +++G ++F +G+N+++L
Sbjct: 395 PTTTITTDQSAYLQSFASK--SNQIVEDGGSDRFFASFGSNSVEL 437
>D7KD84_ARALY (tr|D7KD84) Putative uncharacterized protein OS=Arabidopsis lyrata
subsp. lyrata GN=ARALYDRAFT_470357 PE=4 SV=1
Length = 509
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 127/283 (44%), Gaps = 65/283 (22%)
Query: 29 RRDSFITHRAFCDALAEETARVNAATSINSLAAS--TNFNYH-LMGAPIGPNNMAQHFSS 85
RRDSFITHRAFCDALAEETAR+NAA+ + SLAA+ +N NYH LMG I + S
Sbjct: 182 RRDSFITHRAFCDALAEETARLNAASHLKSLAATAGSNLNYHYLMGTLIPSPSSQPPPSF 241
Query: 86 IFK-----------PISSS----NDQQTIDQTRRGLPLWVSQGPQGHEAI-INNSIQEIH 129
F PI ++ + Q + + L LW+ H+ + I + I
Sbjct: 242 PFGPPQPQHHHQHFPIPTTTFDHHHHQDVMKPASSLSLWMGGNINHHQQVTIEDRI---- 297
Query: 130 RQLGSLTSSGTIFGQDPLVSSSDQYHQINWPKIFGN----NKQISSNN---VHQEELTST 182
P + D NW +FGN + I++++ H +
Sbjct: 298 -------------APQPHSPNED----YNW--VFGNANNRGELITTSDSLITHDHNINIV 338
Query: 183 TSLPLNEAAVQLASVPSLYSGXXXXXXXXXXXXXXXXXXXXLLQKAAQIGATST------ 236
S AA L SVPSL+S LLQKAAQ+G+TS+
Sbjct: 339 QSKENTNAATSL-SVPSLFS-SVDQITQDANAASANMSATALLQKAAQMGSTSSTSPTTT 396
Query: 237 ----DPSFLGSFGLKCS--SNGQIQEG--NKFCGLYGANNLDL 271
+L SF K S SN +++G +KF L+G+N+++L
Sbjct: 397 ITTDQSGYLQSFASKISDQSNQIVEDGGSDKFFALFGSNSVEL 439
>B8ABF4_ORYSI (tr|B8ABF4) Putative uncharacterized protein OS=Oryza sativa subsp.
indica GN=OsI_01118 PE=4 SV=1
Length = 495
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 101/244 (41%), Gaps = 62/244 (25%)
Query: 29 RRDSFITHRAFCDALAEETARVNAATSINSLA--------ASTNFNYHLMGAP----IGP 76
RRDSFITHRAFCDALAEETAR+NAA+ + A ++ + G P + P
Sbjct: 174 RRDSFITHRAFCDALAEETARLNAASGAAAAAAAATATSLCGQSYLFAGSGGPGMAGMRP 233
Query: 77 NNMAQ----------HFSSIFKPISSSNDQQTID---QTRRGLPLWVSQGPQGHEAIINN 123
N M + P + D GL LW G EA+ +
Sbjct: 234 NMMMPPAAVAAGGQLRAGQMLGPAAGGVGGDLCDGGVARHGGLSLW------GGEALPSM 287
Query: 124 SIQEIHRQLGSLTSSG--TIFGQ---DPLVSSSD------QYHQINWPKIFGNNKQISSN 172
+G L S G T+ Q D SS Q++W ++GN K SSN
Sbjct: 288 G------HIGVLASGGAATVPPQLYVDLFAPSSGAPPPQLDAAQLSW--LYGNGKLSSSN 339
Query: 173 NVHQEELTSTTSLPLNEAAVQLASVPSLYSGXXXXXXXXXXXXXXXXXXXXLLQKAAQIG 232
ELTS T+ AA + SVPS++S LLQKAAQIG
Sbjct: 340 ---ASELTSATA-----AAKEAESVPSVFS----NQQHAKPAAPTDMSATALLQKAAQIG 387
Query: 233 ATST 236
A ++
Sbjct: 388 AVTS 391
>C0HFE4_MAIZE (tr|C0HFE4) Putative uncharacterized protein OS=Zea mays PE=2 SV=1
Length = 599
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 40/65 (61%), Gaps = 6/65 (9%)
Query: 29 RRDSFITHRAFCDALAEETARVNAATSINSLAASTNFNYHLMGAPIGPNNMAQHFSSIFK 88
RRDSFITHRAFCDALA+E+AR+ +S+ +N HL GA NMA S +
Sbjct: 199 RRDSFITHRAFCDALAQESARLPPTSSL------SNLTSHLYGAATNAGNMALSLSQVGS 252
Query: 89 PISSS 93
++S+
Sbjct: 253 HLTST 257
>B9EUM1_ORYSJ (tr|B9EUM1) Putative uncharacterized protein OS=Oryza sativa subsp.
japonica GN=OsJ_01066 PE=4 SV=1
Length = 496
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 101/243 (41%), Gaps = 59/243 (24%)
Query: 29 RRDSFITHRAFCDALAEETARVNAATSINSLAAST--------NFNYHLMGAP----IGP 76
RRDSFITHRAFCDALAEETAR+NAA+ + AA+ ++ + G P + P
Sbjct: 174 RRDSFITHRAFCDALAEETARLNAASGAAAAAAAATATSLCGQSYLFAGSGGPGMAGMRP 233
Query: 77 NNMAQHFSSIFKPISSSNDQQTIDQ--------------TRRGLPLWVSQGPQGHEAIIN 122
N M ++ + R GL LW G EA+ +
Sbjct: 234 NMMIPPAAAAAGGPAQGGSDARSRGGGRRWGPVRRPPGAARAGLSLW------GGEALPS 287
Query: 123 NSIQEIHRQLGSLTSSG--TIFGQ---DPLVSSS----DQYHQINWPKIFGNNKQISSNN 173
+G L S G T+ Q D SS Q+ ++GN K SSN
Sbjct: 288 MG------HIGVLASGGAATVPPQLYVDLFAPSSGAPPPQFDAAQLSWLYGNGKLSSSN- 340
Query: 174 VHQEELTSTTSLPLNEAAVQLASVPSLYSGXXXXXXXXXXXXXXXXXXXXLLQKAAQIGA 233
ELTS T+ AA + SVPS++S LLQKAAQIGA
Sbjct: 341 --ASELTSATA-----AAKEAESVPSVFS----NQQHAKPAAPTDMSATALLQKAAQIGA 389
Query: 234 TST 236
++
Sbjct: 390 VTS 392
>B9S0N0_RICCO (tr|B9S0N0) Nucleic acid binding protein, putative OS=Ricinus
communis GN=RCOM_1356760 PE=4 SV=1
Length = 525
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 105/230 (45%), Gaps = 39/230 (16%)
Query: 29 RRDSFITHRAFCDALAEETARVNAATSINSLAASTNFNYHL-MGAP-IGPNNMA---QHF 83
R+DSFITHRAFCDALAEE+AR N+A N + N +L GAP G ++A Q
Sbjct: 183 RKDSFITHRAFCDALAEESARFNSAPPANLNFRNENSVVNLPHGAPGHGVQDIASISQFS 242
Query: 84 SSIFKPISSSNDQQTIDQTR-RGLPLWVSQ-----GPQGHEAIINNSIQEIHRQLGSLTS 137
+S F+ ++ + DQ + GL LW++Q P + + NNS SL +
Sbjct: 243 TSTFRSDVNAMTCVSSDQQKPAGLSLWLNQVNSHMNPA--DTVANNS---------SLYA 291
Query: 138 SGTIFGQDPLVSSSDQYHQINWPKIFGNNKQISSNNVHQEELTSTTSLPLNEAAVQLA-- 195
S G +V QI ++G++ + N+ L L E +
Sbjct: 292 SSNSTGLPEMV-------QIGSSNLYGSSSATNFGNLTLSGLPH--GLKEEEGGDKRTNM 342
Query: 196 --SVPSLYSGXXXXXXXXXXXXXXXXXXXXLLQKAAQIGAT-STDPSFLG 242
S+PSLYS LLQKAAQ+G+T S++ SF G
Sbjct: 343 TDSLPSLYS---DNHQNKQSKPVAPMSATALLQKAAQMGSTRSSNQSFFG 389
>C5XJH3_SORBI (tr|C5XJH3) Putative uncharacterized protein Sb03g000300 OS=Sorghum
bicolor GN=Sb03g000300 PE=4 SV=1
Length = 444
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 96/225 (42%), Gaps = 57/225 (25%)
Query: 30 RDSFITHRAFCDALAEETARVNAATSINSLAASTNFNYHLMGAPIG--PNNMAQHFSSI- 86
RDSFITHRAFCDALAEETAR+NAA+S A +Y G+P G PN M +
Sbjct: 149 RDSFITHRAFCDALAEETARLNAASS-----AGAATSYLFAGSPPGLHPNMMLPPAPAPA 203
Query: 87 ------FKPISSSNDQQTIDQTRRGLPLWVSQGPQGHEAIINNSIQEIHRQLGSLTSSGT 140
KP+ GL LW G +A+ + +G + ++G
Sbjct: 204 PAPGPHLKPLGP--------HVVGGLSLW-----GGGDALPS--------MVGHIGATGG 242
Query: 141 IF--GQDPLVSS-------SDQYHQINWPKIFGNNKQISSNNVHQEELTSTTSLPLNEAA 191
I G +P V S Q+ W + GN +++S+N ELTS AA
Sbjct: 243 ILLPGGEPAVPPQLYADLFSPAPPQLGW--LCGNGSKLASSNA--SELTSAA------AA 292
Query: 192 VQLASVPSLYSGXXXXXXXXXXXXXXXXXXXXLLQKAAQIGATST 236
S++SG LLQKAAQ+GA ++
Sbjct: 293 SGKQDTDSVFSG---QHHAKPTAPAADMSATALLQKAAQMGAVTS 334
>B9S7A9_RICCO (tr|B9S7A9) Nucleic acid binding protein, putative OS=Ricinus
communis GN=RCOM_0775740 PE=4 SV=1
Length = 589
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 43/68 (63%), Gaps = 11/68 (16%)
Query: 29 RRDSFITHRAFCDALAEETARVNAATSINSLAASTNFNYHLMGAPIGPNNMAQHFSSIFK 88
RRDSFITHRAFCDALA+E+AR N T++N++ + HL G +NM+ S +
Sbjct: 185 RRDSFITHRAFCDALAQESAR-NPPTNLNTIGS------HLYGG----SNMSLGLSQVNT 233
Query: 89 PISSSNDQ 96
ISS DQ
Sbjct: 234 QISSMQDQ 241