Jatropha Genome Database

JcCB0573121.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0573121.10 + phase: 0 /partial
         (129 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9SWZ9_RICCO (tr|B9SWZ9) Nitrilase, putative OS=Ricinus communis...    94   6e-18
B9SLD5_RICCO (tr|B9SLD5) Transcription factor, putative OS=Ricin...    60   8e-08
D7LRD9_ARALY (tr|D7LRD9) Putative uncharacterized protein (Fragm...    59   1e-07
D1MJ53_PEA (tr|D1MJ53) Proliferating cell nuclear antigen gene-c...    57   7e-07
B9GMN9_POPTR (tr|B9GMN9) Predicted protein OS=Populus trichocarp...    55   2e-06
B9S0J1_RICCO (tr|B9S0J1) Putative uncharacterized protein OS=Ric...    55   4e-06
C5YCH8_SORBI (tr|C5YCH8) Putative uncharacterized protein Sb06g0...    54   4e-06

>B9SWZ9_RICCO (tr|B9SWZ9) Nitrilase, putative OS=Ricinus communis GN=RCOM_1258620
           PE=4 SV=1
          Length = 442

 Score = 93.6 bits (231), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 57/120 (47%), Positives = 70/120 (58%), Gaps = 8/120 (6%)

Query: 5   QLQPSSENAQSDAKRGKPTRRRFTGDAHVPINKRVRVPAICVPAIFHLKKERGLRSDGDI 64
           Q+QPSS N     +  +P RRR T   H P +KRVR+P ICVPA+ HLK+E GLRSD + 
Sbjct: 7   QVQPSSSNINEPDR--QPQRRRSTA-GHRP-DKRVRIPPICVPAMIHLKQELGLRSDAET 62

Query: 65  IHWLIHELRPELLPAP----KXXXXXXXXXXXXXXXDSVPKPVCMEYLNDDKVASYLPVA 120
           IHWLIH++RP+L+  P    K               D   K  CMEYLN DK  SY P+A
Sbjct: 63  IHWLIHQVRPQLIDPPAKATKPPISHRNRPSCTVLDDFALKTDCMEYLNCDKPISYPPLA 122


>B9SLD5_RICCO (tr|B9SLD5) Transcription factor, putative OS=Ricinus communis
           GN=RCOM_0685420 PE=4 SV=1
          Length = 444

 Score = 60.1 bits (144), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 26/77 (33%), Positives = 47/77 (61%), Gaps = 3/77 (3%)

Query: 6   LQPSSENAQSDAKRGKPTRRRFTGDAHVPIN---KRVRVPAICVPAIFHLKKERGLRSDG 62
           + PS+ N+ + A   KPT ++ + D H  ++   +R+R+PA+C   +F L +E G +SDG
Sbjct: 89  VHPSTSNSNNSALTIKPTTKKPSKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDG 148

Query: 63  DIIHWLIHELRPELLPA 79
           + I WL+ +  P ++ A
Sbjct: 149 ETIEWLLQQAEPAIIAA 165


>D7LRD9_ARALY (tr|D7LRD9) Putative uncharacterized protein (Fragment)
           OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_485126
           PE=4 SV=1
          Length = 468

 Score = 59.3 bits (142), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 3/77 (3%)

Query: 6   LQPSSENAQSDAKRGKPTRRRFTGDAHVPIN---KRVRVPAICVPAIFHLKKERGLRSDG 62
           LQ   E+A   A +  P +R  T D H  ++   +R+R+PA+C   +F L +E G +SDG
Sbjct: 89  LQTQEESAAVVAAKKPPLKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDG 148

Query: 63  DIIHWLIHELRPELLPA 79
           + I WL+ +  P ++ A
Sbjct: 149 ETIEWLLQQAEPSVIAA 165


>D1MJ53_PEA (tr|D1MJ53) Proliferating cell nuclear antigen gene-controlling
           element binding factor (Fragment) OS=Pisum sativum
           GN=PEAPCF1 PE=2 SV=1
          Length = 216

 Score = 57.0 bits (136), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 3/68 (4%)

Query: 15  SDAKRGKPTRRRFTGDAHVPIN---KRVRVPAICVPAIFHLKKERGLRSDGDIIHWLIHE 71
           S  +R   T  R T D H  +N   +RVR+P +C   IF L +E G RSDG+ I WL+ +
Sbjct: 50  STVRRTSTTASRSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGETIEWLLRQ 109

Query: 72  LRPELLPA 79
             P ++ A
Sbjct: 110 AEPSIIAA 117


>B9GMN9_POPTR (tr|B9GMN9) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_750930 PE=4 SV=1
          Length = 302

 Score = 55.5 bits (132), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 4/81 (4%)

Query: 2   EIRQLQPSSENAQSDAKRGKPTRRRFTGDAHVPIN---KRVRVPAICVPAIFHLKKERGL 58
           EI+ LQ   EN   + K+  P +R    D H  ++   +R+R+PA+C   IF L +E G 
Sbjct: 39  EIKDLQIMIENRDHNKKQLAP-KRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGN 97

Query: 59  RSDGDIIHWLIHELRPELLPA 79
           +SDG+ I WL+ +  P ++ A
Sbjct: 98  KSDGETIQWLLQQAEPSIIAA 118


>B9S0J1_RICCO (tr|B9S0J1) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_1355270 PE=4 SV=1
          Length = 215

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 4/63 (6%)

Query: 20  GKPTRRRFTGDAHVPIN---KRVRVPAICVPAIFHLKKERGLRSDGDIIHWLIHELRPEL 76
           G+PT    + D H  +N   +RVR+PA+C   IF L +E G RSDG+ I WL+ +  P +
Sbjct: 41  GRPTNS-LSKDRHTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSI 99

Query: 77  LPA 79
           + A
Sbjct: 100 IAA 102


>C5YCH8_SORBI (tr|C5YCH8) Putative uncharacterized protein Sb06g023130
          OS=Sorghum bicolor GN=Sb06g023130 PE=4 SV=1
          Length = 192

 Score = 54.3 bits (129), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 3/53 (5%)

Query: 30 DAHVPIN---KRVRVPAICVPAIFHLKKERGLRSDGDIIHWLIHELRPELLPA 79
          D H  +N   +RVR+P +C   +F L +E GL+SDG  I WL+H+  P +L A
Sbjct: 37 DRHSKVNGRGRRVRMPIVCAARVFQLTRELGLKSDGQTIEWLLHQAEPSILAA 89