Jatropha Genome Database

JcCB0529981.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0529981.10 - phase: 0 /partial
         (55 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9H370_POPTR (tr|B9H370) Predicted protein OS=Populus trichocarp...    58   3e-07
B9GV71_POPTR (tr|B9GV71) Predicted protein (Fragment) OS=Populus...    58   4e-07
A9PG50_POPTR (tr|A9PG50) Putative uncharacterized protein OS=Pop...    57   4e-07

>B9H370_POPTR (tr|B9H370) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_648088 PE=4 SV=1
          Length = 313

 Score = 58.2 bits (139), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/41 (58%), Positives = 34/41 (82%)

Query: 5   ASLRDANKYCNTILGRLSKARGCMKSMLILSVAIAVGAVIM 45
           ASL++A+KYC  ILGRLS+  GC++S+ I+S A+A GAVI+
Sbjct: 253 ASLKEADKYCKAILGRLSRGHGCIRSLFIVSAALAAGAVII 293


>B9GV71_POPTR (tr|B9GV71) Predicted protein (Fragment) OS=Populus trichocarpa
           GN=POPTRDRAFT_409505 PE=4 SV=1
          Length = 430

 Score = 57.8 bits (138), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 25/41 (60%), Positives = 33/41 (80%)

Query: 5   ASLRDANKYCNTILGRLSKARGCMKSMLILSVAIAVGAVIM 45
           ASL++A+KYC  ILGR S+  GC++S  I+S A+AVGAVIM
Sbjct: 389 ASLKEADKYCKAILGRFSRGLGCIRSTFIVSAALAVGAVIM 429


>A9PG50_POPTR (tr|A9PG50) Putative uncharacterized protein OS=Populus trichocarpa
           PE=2 SV=1
          Length = 313

 Score = 57.4 bits (137), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 25/41 (60%), Positives = 33/41 (80%)

Query: 5   ASLRDANKYCNTILGRLSKARGCMKSMLILSVAIAVGAVIM 45
           ASL++A+KYC  ILGR S+  GC++S  I+S A+AVGAVIM
Sbjct: 253 ASLKEADKYCKAILGRFSRGLGCIRSTFIVSAALAVGAVIM 293