Jatropha Genome Database

JcCB0517161.20
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0517161.20 + phase: 0 /partial
         (217 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9S2W3_RICCO (tr|B9S2W3) Pentatricopeptide repeat-containing pro...   275   2e-72
D7KUI9_ARALY (tr|D7KUI9) Binding protein OS=Arabidopsis lyrata s...   262   2e-68
D7SJE5_VITVI (tr|D7SJE5) Whole genome shotgun sequence of line P...   233   9e-60
C0PG17_MAIZE (tr|C0PG17) Putative uncharacterized protein OS=Zea...    64   1e-08
A2XLS2_ORYSI (tr|A2XLS2) Putative uncharacterized protein OS=Ory...    62   3e-08
C5XZK7_SORBI (tr|C5XZK7) Putative uncharacterized protein Sb04g0...    62   4e-08
C5XYW3_SORBI (tr|C5XYW3) Putative uncharacterized protein Sb04g0...    62   5e-08
Q84R52_ORYSJ (tr|Q84R52) Os03g0736200 protein OS=Oryza sativa su...    62   6e-08
C7IVV4_9POAL (tr|C7IVV4) Oryza sativa fertility restorer-like pr...    61   6e-08
C5X1C9_SORBI (tr|C5X1C9) Putative uncharacterized protein Sb01g0...    60   1e-07
D7U0L2_VITVI (tr|D7U0L2) Whole genome shotgun sequence of line P...    60   2e-07
B9SQC8_RICCO (tr|B9SQC8) Pentatricopeptide repeat-containing pro...    60   2e-07
A2X384_ORYSI (tr|A2X384) Putative uncharacterized protein OS=Ory...    60   2e-07
Q6ETX2_ORYSJ (tr|Q6ETX2) Os02g0266200 protein OS=Oryza sativa su...    60   2e-07
B9GEL3_POPTR (tr|B9GEL3) Predicted protein OS=Populus trichocarp...    60   2e-07
B9GR59_POPTR (tr|B9GR59) Predicted protein (Fragment) OS=Populus...    56   3e-06

>B9S2W3_RICCO (tr|B9S2W3) Pentatricopeptide repeat-containing protein, putative
           OS=Ricinus communis GN=RCOM_0562960 PE=4 SV=1
          Length = 441

 Score =  275 bits (703), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 140/191 (73%), Positives = 163/191 (85%), Gaps = 1/191 (0%)

Query: 27  RSFDSQLASATVTSSLLTVDLISDVFRSIPRFFFQSTRSIGRQNTTRHRSPLKQRNLKQE 86
           R FD QLAS+T TS L + +LISDV RSIPRFFFQSTRS+GRQ+TTRHRSPLKQR+LKQE
Sbjct: 22  RPFDIQLASSTTTSLL-SSNLISDVLRSIPRFFFQSTRSVGRQSTTRHRSPLKQRSLKQE 80

Query: 87  SCKYRDKVLVLGPAAYRDHKRVNVGLNKAMEFFYWLETHFSFAHTEMTCREMACVLARGN 146
           + K+ +K+L+LGPAAY+D KRV +G+ KAMEFFYW+ET+  F HTE TCREM  VLAR N
Sbjct: 81  THKHNNKLLILGPAAYKDPKRVKLGVFKAMEFFYWVETNCDFIHTESTCREMGFVLARAN 140

Query: 147 RLDKLWQFLKDMGRRENGVGVKLVTTNTITCLIKVLGEEGLVNQALALFYRMKQYHCKPD 206
           RLDKLW FL++M +RE   G KLVTTN +TCLIKVLGEEGLV +AL+LFYRMK+YHCKPD
Sbjct: 141 RLDKLWNFLQEMAKREVFDGRKLVTTNAVTCLIKVLGEEGLVKEALSLFYRMKKYHCKPD 200

Query: 207 VYAYNTIINAL 217
           VYAYNTII AL
Sbjct: 201 VYAYNTIIYAL 211


>D7KUI9_ARALY (tr|D7KUI9) Binding protein OS=Arabidopsis lyrata subsp. lyrata
           GN=ARALYDRAFT_895630 PE=4 SV=1
          Length = 459

 Score =  262 bits (670), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 125/191 (65%), Positives = 148/191 (77%), Gaps = 3/191 (1%)

Query: 27  RSFDSQLASATVTSSLLTVDLISDVFRSIPRFFFQSTRSIGRQNTTRHRSPLKQRNLKQE 86
           R FD+ LAS+TV +   T  L+SDV RSIPRFFF S RSIGRQ   RHRSPLKQRNL  E
Sbjct: 23  RPFDAVLASSTVANPW-TQQLVSDVLRSIPRFFFISPRSIGRQKGFRHRSPLKQRNLSDE 81

Query: 87  SCKYRDKVLVLGPAAYRDHKRVNVGLNKAMEFFYWLETHFSFAHTEMTCREMACVLARGN 146
           S + R +VLVLGP AY D K++++GL KA+EFF+W+E HF F H E+TCR+MAC+LA+GN
Sbjct: 82  SQRRRSEVLVLGPGAYIDPKKISLGLQKALEFFFWIEIHFGFGHNEITCRDMACLLAKGN 141

Query: 147 RLDKLWQFLKDMGRRENGVGVKLVTTNTITCLIKVLGEEGLVNQALALFYRMKQYHCKPD 206
               LW FL+ + RRENG  V  VTT +ITCL+K LGEEG V +ALA FYRMK+YHCKPD
Sbjct: 142 DFKGLWDFLRQVSRRENGKNV--VTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPD 199

Query: 207 VYAYNTIINAL 217
           VYAYNTIINAL
Sbjct: 200 VYAYNTIINAL 210


>D7SJE5_VITVI (tr|D7SJE5) Whole genome shotgun sequence of line PN40024,
           scaffold_0.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00008474001 PE=4 SV=1
          Length = 381

 Score =  233 bits (595), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 116/174 (66%), Positives = 130/174 (74%), Gaps = 12/174 (6%)

Query: 44  TVDLISDVFRSIPRFFFQSTRSIGRQNTTRHRSPLKQRNLKQESCKYRDKVLVLGPAAYR 103
           T D +S+V RSIPR FFQS RSIGRQ   RHRSPLKQRNL QE  K+           YR
Sbjct: 41  TTDSVSEVLRSIPRLFFQSPRSIGRQKGFRHRSPLKQRNLYQEPNKFHR---------YR 91

Query: 104 DHKRVNVGLNKAMEFFYWLETHFSFAHTEMTCREMACVLARGNRLDKLWQFLKDMGRREN 163
           D  +V +G+ KAMEF+ W+ET F F+H EMTCREM CVLARGNRL  LW+FL +M R+  
Sbjct: 92  DPHKVKLGVEKAMEFYSWVETQFGFSHNEMTCREMGCVLARGNRLKVLWEFLHEMARK-G 150

Query: 164 GVGVKLVTTNTITCLIKVLGEEGLVNQALALFYRMKQYHCKPDVYAYNTIINAL 217
           G GV  VTT TITCL+KVLGEEGL NQALA FYRMKQ+HCKPDVYAYNTII AL
Sbjct: 151 GNGV--VTTATITCLMKVLGEEGLANQALAAFYRMKQFHCKPDVYAYNTIIYAL 202


>C0PG17_MAIZE (tr|C0PG17) Putative uncharacterized protein OS=Zea mays PE=2 SV=1
          Length = 424

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/51 (54%), Positives = 36/51 (70%)

Query: 167 VKLVTTNTITCLIKVLGEEGLVNQALALFYRMKQYHCKPDVYAYNTIINAL 217
             +V+T  +T +I+VLGEEGL   ALA F+RM+Q HC PD   YNT+I AL
Sbjct: 146 ASVVSTAALTDVIRVLGEEGLPRHALAAFHRMRQLHCAPDAQCYNTLIAAL 196


>A2XLS2_ORYSI (tr|A2XLS2) Putative uncharacterized protein OS=Oryza sativa subsp.
           indica GN=OsI_13425 PE=4 SV=1
          Length = 406

 Score = 62.4 bits (150), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 41/67 (61%), Gaps = 8/67 (11%)

Query: 151 LWQFLKDMGRRENGVGVKLVTTNTITCLIKVLGEEGLVNQALALFYRMKQYHCKPDVYAY 210
           L++ L+D           LV+T  +T +I+ LGEEGL   ALA F+R +Q+HC PD   Y
Sbjct: 120 LFRLLRDHA--------PLVSTAALTDVIRALGEEGLPRHALAAFHRARQFHCSPDAQCY 171

Query: 211 NTIINAL 217
           NT++ AL
Sbjct: 172 NTLLAAL 178


>C5XZK7_SORBI (tr|C5XZK7) Putative uncharacterized protein Sb04g009890 OS=Sorghum
           bicolor GN=Sb04g009890 PE=4 SV=1
          Length = 571

 Score = 62.0 bits (149), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 64/115 (55%), Gaps = 4/115 (3%)

Query: 103 RDHKRVNVGLNKAMEFFYWLETHFSFAHTEMTCREMACVLARGNRLDKLWQFLKDMGRRE 162
           R+  + ++G+N  M+FF W     ++ H   T   +   L    +  ++W+ +++M R  
Sbjct: 94  REIMKTDIGVNVKMQFFRWAAKRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNP 153

Query: 163 NGVGVKLVTTNTITCLIKVLGEEGLVNQALALFYRMKQYHCKPDVYAYNTIINAL 217
               + +VT   ++ ++++LG   +V++A+A+FY++K   C+P   AYN++I  L
Sbjct: 154 ----ICVVTPTELSEVVRMLGNAKMVSKAIAIFYQIKTRKCQPTAQAYNSMIIML 204


>C5XYW3_SORBI (tr|C5XYW3) Putative uncharacterized protein Sb04g028250 OS=Sorghum
           bicolor GN=Sb04g028250 PE=4 SV=1
          Length = 638

 Score = 61.6 bits (148), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/112 (25%), Positives = 63/112 (56%), Gaps = 4/112 (3%)

Query: 103 RDHKRVNVGLNKAMEFFYWLETHFSFAHTEMTCREMACVLARGNRLDKLWQFLKDMGRRE 162
           R+  + ++G+N  M+FF W     ++ H   T   +   L    +  ++W+ +++M R  
Sbjct: 94  REVMKTDIGVNVKMQFFRWAAKRRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNP 153

Query: 163 NGVGVKLVTTNTITCLIKVLGEEGLVNQALALFYRMKQYHCKPDVYAYNTII 214
               + +VT   ++ ++++LG   +V++A+A+FY++K   C+P   AYN++I
Sbjct: 154 ----ICVVTPTELSEVVRMLGNAKMVSKAIAIFYQIKTRKCQPTAQAYNSMI 201


>Q84R52_ORYSJ (tr|Q84R52) Os03g0736200 protein OS=Oryza sativa subsp. japonica
           GN=OSJNBb0016H12.12 PE=4 SV=1
          Length = 406

 Score = 61.6 bits (148), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 41/67 (61%), Gaps = 8/67 (11%)

Query: 151 LWQFLKDMGRRENGVGVKLVTTNTITCLIKVLGEEGLVNQALALFYRMKQYHCKPDVYAY 210
           L++ L+D           LV+T  +T +I+ LGEEGL   ALA F+R +Q+HC PD   Y
Sbjct: 120 LFRLLRDHA--------PLVSTAALTDVIRALGEEGLPRHALAAFHRGRQFHCSPDAQCY 171

Query: 211 NTIINAL 217
           NT++ AL
Sbjct: 172 NTLLAAL 178


>C7IVV4_9POAL (tr|C7IVV4) Oryza sativa fertility restorer-like protein AAP03402
           OS=Saccharum hybrid cultivar GN=Sh265O22g_170 PE=4 SV=1
          Length = 418

 Score = 61.2 bits (147), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 28/51 (54%), Positives = 34/51 (66%)

Query: 167 VKLVTTNTITCLIKVLGEEGLVNQALALFYRMKQYHCKPDVYAYNTIINAL 217
             LV+T  IT +I+ LGEEGL   ALA F+RM+Q  C PD   YNT+I AL
Sbjct: 140 APLVSTAAITDVIRALGEEGLPRHALATFHRMRQLRCAPDAQCYNTLIAAL 190


>C5X1C9_SORBI (tr|C5X1C9) Putative uncharacterized protein Sb01g008870 OS=Sorghum
           bicolor GN=Sb01g008870 PE=4 SV=1
          Length = 426

 Score = 60.5 bits (145), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/51 (52%), Positives = 34/51 (66%)

Query: 167 VKLVTTNTITCLIKVLGEEGLVNQALALFYRMKQYHCKPDVYAYNTIINAL 217
             LV+T  +T +I+ LGEEGL   ALA F+RM+Q  C PD   YNT+I AL
Sbjct: 148 APLVSTAALTDVIRALGEEGLPRHALAAFHRMRQLRCAPDAQCYNTLIAAL 198


>D7U0L2_VITVI (tr|D7U0L2) Whole genome shotgun sequence of line PN40024,
           scaffold_2.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00017111001 PE=4 SV=1
          Length = 638

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 61/112 (54%), Gaps = 5/112 (4%)

Query: 103 RDHKRVNVGLNKAMEFFYWLETHFSFAHTEMTCREMACVLARGNRLDKLWQFLKDMGRRE 162
           R+  +++V ++  ++FF W     +F H   T   +   L     L ++W+ +++M R  
Sbjct: 95  REVLKIDVEIHVKIQFFKWAGKRRNFEHDSTTYMALIHCLDEAGMLGEMWKTIQEMVRST 154

Query: 163 NGVGVKLVTTNTITCLIKVLGEEGLVNQALALFYRMKQYHCKPDVYAYNTII 214
             +G        ++ ++KVLG+  +VN+AL++FY++K   CKP    YN++I
Sbjct: 155 CVIG-----PADLSEIVKVLGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMI 201


>B9SQC8_RICCO (tr|B9SQC8) Pentatricopeptide repeat-containing protein, putative
           OS=Ricinus communis GN=RCOM_0980860 PE=4 SV=1
          Length = 642

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 69/137 (50%), Gaps = 19/137 (13%)

Query: 93  KVLVLGPAAYR---------DHK------RVNVGLNKAMEFFYWLETHFSFAHTEMTCRE 137
           K+   GP A +         DH+      +++V +N  ++FF W     +F H   +   
Sbjct: 73  KIFKWGPDAEKALEVLKLKVDHRLVHEVLKIDVEINVKIQFFKWAGKRRNFEHDSSSFMA 132

Query: 138 MACVLARGNRLDKLWQFLKDMGRRENGVGVKLVTTNTITCLIKVLGEEGLVNQALALFYR 197
           +   L       ++W+ ++DM R    V    +++  ++ ++K+LG+  +VN+AL++FY+
Sbjct: 133 LIHSLDEAGFYGEMWKTIQDMVRSSTCV----ISSVYLSEIVKLLGKAKMVNKALSVFYQ 188

Query: 198 MKQYHCKPDVYAYNTII 214
           +K   CKP    YN++I
Sbjct: 189 IKGRKCKPAATTYNSMI 205


>A2X384_ORYSI (tr|A2X384) Putative uncharacterized protein OS=Oryza sativa subsp.
           indica GN=OsI_06665 PE=4 SV=1
          Length = 632

 Score = 59.7 bits (143), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/112 (25%), Positives = 61/112 (54%), Gaps = 4/112 (3%)

Query: 103 RDHKRVNVGLNKAMEFFYWLETHFSFAHTEMTCREMACVLARGNRLDKLWQFLKDMGRRE 162
           R+  + +VG+N  M+FF W     ++ H   T   +   L    +  ++W+ +++M R  
Sbjct: 94  REVMKTDVGVNVKMQFFRWAAKKRNYQHDTSTYMALIHCLELVEQYGEMWKMIQEMVRSP 153

Query: 163 NGVGVKLVTTNTITCLIKVLGEEGLVNQALALFYRMKQYHCKPDVYAYNTII 214
               + +VT   ++ +I++LG   ++ +A+ +FY++K   C+P   AYN++I
Sbjct: 154 ----ICVVTPMELSQVIRMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMI 201


>Q6ETX2_ORYSJ (tr|Q6ETX2) Os02g0266200 protein OS=Oryza sativa subsp. japonica
           GN=P0006C08.32 PE=2 SV=1
          Length = 632

 Score = 59.7 bits (143), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/112 (25%), Positives = 61/112 (54%), Gaps = 4/112 (3%)

Query: 103 RDHKRVNVGLNKAMEFFYWLETHFSFAHTEMTCREMACVLARGNRLDKLWQFLKDMGRRE 162
           R+  + +VG+N  M+FF W     ++ H   T   +   L    +  ++W+ +++M R  
Sbjct: 94  REVMKTDVGVNVKMQFFRWAAKKRNYQHDTSTYMALIHCLELVEQYGEMWKMIQEMVRSP 153

Query: 163 NGVGVKLVTTNTITCLIKVLGEEGLVNQALALFYRMKQYHCKPDVYAYNTII 214
               + +VT   ++ +I++LG   ++ +A+ +FY++K   C+P   AYN++I
Sbjct: 154 ----ICVVTPMELSQVIRMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMI 201


>B9GEL3_POPTR (tr|B9GEL3) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_640705 PE=4 SV=1
          Length = 609

 Score = 59.7 bits (143), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 60/112 (53%), Gaps = 4/112 (3%)

Query: 103 RDHKRVNVGLNKAMEFFYWLETHFSFAHTEMTCREMACVLARGNRLDKLWQFLKDMGRRE 162
           R+  +++V +N  ++FF W     +F H   T   +   L       ++W+ +++M R  
Sbjct: 66  REVLKIDVEINVKIQFFKWAGKRRNFEHDLTTYMPLIRCLDDCGLFGEMWKMIQEMVRSP 125

Query: 163 NGVGVKLVTTNTITCLIKVLGEEGLVNQALALFYRMKQYHCKPDVYAYNTII 214
             V    +    ++ ++K+LG+  +VN+AL++FY++K   CKP    YN++I
Sbjct: 126 TCV----IGPADLSEVVKILGKAKMVNKALSVFYQIKSRKCKPTASTYNSMI 173


>B9GR59_POPTR (tr|B9GR59) Predicted protein (Fragment) OS=Populus trichocarpa
           GN=POPTRDRAFT_409352 PE=4 SV=1
          Length = 602

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 53/103 (51%), Gaps = 4/103 (3%)

Query: 115 AMEFFYWLETHFSFAHTEMTCREMACVLARGNRLDKLWQFLKDMGRRENGVGVKLVTTNT 174
           A +FF W      + H     + M  VL++  +   +W  L++M RR+N V   L+T+  
Sbjct: 98  AYKFFVWASKQPCYRHCYENYKAMIKVLSKMKQFGAVWALLEEM-RRDNSV---LITSEV 153

Query: 175 ITCLIKVLGEEGLVNQALALFYRMKQYHCKPDVYAYNTIINAL 217
              +++      +VN+A+ +   M +Y C+PD Y +  +++AL
Sbjct: 154 FVVVMRRFASSRMVNKAIEVLDEMPKYGCEPDEYVFGCLLDAL 196