Jatropha Genome Database

JcCB0514151.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0514151.10 + phase: 1 /partial
         (55 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9MYQ9_POPTR (tr|B9MYQ9) Predicted protein OS=Populus trichocarp...    74   5e-12
B9S6M2_RICCO (tr|B9S6M2) Adenosine diphosphatase, putative OS=Ri...    67   8e-10
B9HQE9_POPTR (tr|B9HQE9) Predicted protein OS=Populus trichocarp...    64   5e-09
D7T1H0_VITVI (tr|D7T1H0) Whole genome shotgun sequence of line P...    58   3e-07

>B9MYQ9_POPTR (tr|B9MYQ9) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_594913 PE=4 SV=1
          Length = 542

 Score = 73.9 bits (180), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 32/49 (65%), Positives = 40/49 (81%)

Query: 3   REGSLGNPCLPKGYESAFNVSYSELLFSHPAGNFTECRLEALTLLKSKE 51
           R+G +GNPC+PKGYE A+N+S  +LL SH AGNFT CRLE L LLKS++
Sbjct: 306 RDGFVGNPCIPKGYEVAYNISDPKLLLSHGAGNFTACRLEVLALLKSRQ 354


>B9S6M2_RICCO (tr|B9S6M2) Adenosine diphosphatase, putative OS=Ricinus communis
           GN=RCOM_1110760 PE=4 SV=1
          Length = 480

 Score = 66.6 bits (161), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 31/49 (63%), Positives = 39/49 (79%)

Query: 3   REGSLGNPCLPKGYESAFNVSYSELLFSHPAGNFTECRLEALTLLKSKE 51
           R  S GNPC+PKG+E A N + ++LL SH AGNFT CRLEAL+LLKS++
Sbjct: 303 RVVSDGNPCIPKGFEIASNTNEAQLLLSHSAGNFTACRLEALSLLKSQQ 351


>B9HQE9_POPTR (tr|B9HQE9) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_878226 PE=4 SV=1
          Length = 517

 Score = 63.9 bits (154), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 28/49 (57%), Positives = 37/49 (75%)

Query: 3   REGSLGNPCLPKGYESAFNVSYSELLFSHPAGNFTECRLEALTLLKSKE 51
           +EG +GNPC+P+GY+ A N+S  +LL SH  GNFT CRLE   LLKS++
Sbjct: 281 KEGFVGNPCIPQGYDLASNISGPKLLMSHGTGNFTACRLEVRALLKSRQ 329


>D7T1H0_VITVI (tr|D7T1H0) Whole genome shotgun sequence of line PN40024,
           scaffold_9.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00037440001 PE=4 SV=1
          Length = 553

 Score = 57.8 bits (138), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/53 (49%), Positives = 37/53 (69%)

Query: 3   REGSLGNPCLPKGYESAFNVSYSELLFSHPAGNFTECRLEALTLLKSKEGSSL 55
           +EG + NPC+ +GY+   + S ++LL SHPAGNF+ CRLE L LLK ++   L
Sbjct: 295 KEGIVNNPCITRGYDLMPDASGTKLLTSHPAGNFSSCRLETLALLKRRKDKCL 347