Jatropha Genome Database

JcCB0487041.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0487041.10 - phase: 0 /pseudo
         (128 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9RKD0_RICCO (tr|B9RKD0) Putative uncharacterized protein OS=Ric...   142   1e-32
B9H980_POPTR (tr|B9H980) Predicted protein OS=Populus trichocarp...   105   2e-21
C6TFR1_SOYBN (tr|C6TFR1) Putative uncharacterized protein OS=Gly...   102   2e-20
D7TBC2_VITVI (tr|D7TBC2) Whole genome shotgun sequence of line P...   100   7e-20
Q5JKQ9_ORYSJ (tr|Q5JKQ9) Os01g0559300 protein OS=Oryza sativa su...    94   4e-18
A2WRD9_ORYSI (tr|A2WRD9) Putative uncharacterized protein OS=Ory...    94   4e-18
C5XNM4_SORBI (tr|C5XNM4) Putative uncharacterized protein Sb03g0...    94   5e-18
B6UG01_MAIZE (tr|B6UG01) Putative uncharacterized protein OS=Zea...    93   1e-17
B4FFG2_MAIZE (tr|B4FFG2) Putative uncharacterized protein OS=Zea...    91   4e-17
D7MFB5_ARALY (tr|D7MFB5) Putative uncharacterized protein OS=Ara...    87   5e-16
Q8RXC0_ARATH (tr|Q8RXC0) Putative uncharacterized protein OS=Ara...    87   7e-16
B4FEK5_MAIZE (tr|B4FEK5) Putative uncharacterized protein OS=Zea...    65   2e-09
B9P6Y9_POPTR (tr|B9P6Y9) Predicted protein (Fragment) OS=Populus...    64   4e-09
Q9STR0_ARATH (tr|Q9STR0) Putative uncharacterized protein T25K17...    54   5e-06

>B9RKD0_RICCO (tr|B9RKD0) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_1048260 PE=4 SV=1
          Length = 197

 Score =  142 bits (357), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 73/110 (66%), Positives = 79/110 (71%), Gaps = 1/110 (0%)

Query: 1   MKKLARNWRKSHEEKXXXXXXXXXXXXXXXXXXXEEQEELVRSLERTQAEQSLFWRRVFA 60
           MKKLARNWRKS +E                    +EQEELVRSLERTQA+QSL WRRVFA
Sbjct: 1   MKKLARNWRKSRDENSSLPTWEDPSLDDSRPMDTQEQEELVRSLERTQAQQSLLWRRVFA 60

Query: 61  GFLFSYAVFQLYSIYQMATSPWELRYQAYFMEDMESWMVISAG-LPLLAC 109
           G LF YA FQ+YSIYQ ATSPWELRY AYFMEDM SWMVISA  + +LAC
Sbjct: 61  GLLFCYAAFQVYSIYQQATSPWELRYHAYFMEDMSSWMVISADWVAVLAC 110


>B9H980_POPTR (tr|B9H980) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_653331 PE=4 SV=1
          Length = 197

 Score =  105 bits (261), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/110 (54%), Positives = 68/110 (61%), Gaps = 3/110 (2%)

Query: 1   MKKLARNWRKSHEEKXXXXXXXXXXXXXXXXXXXEEQEELVRSLERTQAEQSLFWRRVFA 60
           MKKLARNWRKS E                      EQEEL+ SLER +AEQS+ WRRV  
Sbjct: 3   MKKLARNWRKSCE--VDKFALPIRDEDDSRPMDTREQEELILSLEREEAEQSVLWRRVVG 60

Query: 61  GFLFSYAVFQLYSIYQMATSPWELRYQAYFMEDMESWMVISAG-LPLLAC 109
           G +F +A F LYSIYQ A  PWELRY AYFMEDM+S MVI A  + + AC
Sbjct: 61  GIVFCHAAFLLYSIYQQALFPWELRYHAYFMEDMDSSMVIFADWIAISAC 110


>C6TFR1_SOYBN (tr|C6TFR1) Putative uncharacterized protein OS=Glycine max PE=2
           SV=1
          Length = 193

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/110 (50%), Positives = 69/110 (62%), Gaps = 5/110 (4%)

Query: 1   MKKLARNWRKSHEEKXXXXXXXXXXXXXXXXXXXEEQEELVRSLERTQAEQSLFWRRVFA 60
           MKKL+R  R   ++                    +EQEELVRSLER+QA+QS  WRRVFA
Sbjct: 1   MKKLSRKLRNEEDKNLTLPVHDGDSRPLDP----QEQEELVRSLERSQAQQSRLWRRVFA 56

Query: 61  GFLFSYAVFQLYSIYQMATSPWELRYQAYFMEDMESWMVISAG-LPLLAC 109
              F Y VF +YSI   A+SPWELRY AYFME++ SWM+ISA  + +LAC
Sbjct: 57  ALFFCYIVFLMYSIVNQASSPWELRYHAYFMEEIYSWMIISADWVAVLAC 106


>D7TBC2_VITVI (tr|D7TBC2) Whole genome shotgun sequence of line PN40024,
           scaffold_16.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00015253001 PE=4 SV=1
          Length = 196

 Score =  100 bits (248), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 56/110 (50%), Positives = 72/110 (65%), Gaps = 2/110 (1%)

Query: 1   MKKLARNWRKSHEEKXXXXXXXXXXXXXXXXXXXEEQEELVRSLERTQAEQSLFWRRVFA 60
           MKKLAR  R++  E                    +EQEELVRSLER+QA+QSL WR VF+
Sbjct: 1   MKKLARKLRRNSRE-FDDENFSLPTLDDSRPIDSQEQEELVRSLERSQAQQSLLWRSVFS 59

Query: 61  GFLFSYAVFQLYSIYQMATSPWELRYQAYFMEDMESWMVISAG-LPLLAC 109
            FLF +A F +YSI+Q  +SPWELRY AYFME+++S M+I A  + +LAC
Sbjct: 60  VFLFCFAAFLVYSIFQQVSSPWELRYHAYFMEEIDSSMIIFADWVAVLAC 109


>Q5JKQ9_ORYSJ (tr|Q5JKQ9) Os01g0559300 protein OS=Oryza sativa subsp. japonica
           GN=B1064G04.20 PE=2 SV=1
          Length = 195

 Score = 94.0 bits (232), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 47/77 (61%), Positives = 58/77 (75%), Gaps = 1/77 (1%)

Query: 35  EEQEELVRSLERTQAEQSLFWRRVFAGFLFSYAVFQLYSIYQMATSPWELRYQAYFMEDM 94
           ++QEE+VRSLE+ QA+QS  WRRVFAGFL  YA F +YS +  A +PWELRY AYFMED+
Sbjct: 36  QDQEEMVRSLEQKQAQQSRRWRRVFAGFLLGYAAFLVYSGFHHAAAPWELRYHAYFMEDL 95

Query: 95  ESWMVISAG-LPLLACL 110
            S MV+ A  +  LACL
Sbjct: 96  SSPMVVVADWIAALACL 112


>A2WRD9_ORYSI (tr|A2WRD9) Putative uncharacterized protein OS=Oryza sativa subsp.
           indica GN=OsI_02426 PE=4 SV=1
          Length = 195

 Score = 94.0 bits (232), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 47/77 (61%), Positives = 58/77 (75%), Gaps = 1/77 (1%)

Query: 35  EEQEELVRSLERTQAEQSLFWRRVFAGFLFSYAVFQLYSIYQMATSPWELRYQAYFMEDM 94
           ++QEE+VRSLE+ QA+QS  WRRVFAGFL  YA F +YS +  A +PWELRY AYFMED+
Sbjct: 36  QDQEEMVRSLEQKQAQQSRRWRRVFAGFLLGYAAFLVYSGFHHAAAPWELRYHAYFMEDL 95

Query: 95  ESWMVISAG-LPLLACL 110
            S MV+ A  +  LACL
Sbjct: 96  SSPMVVVADWIAALACL 112


>C5XNM4_SORBI (tr|C5XNM4) Putative uncharacterized protein Sb03g025420 OS=Sorghum
           bicolor GN=Sb03g025420 PE=4 SV=1
          Length = 191

 Score = 94.0 bits (232), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 50/77 (64%), Positives = 57/77 (74%), Gaps = 1/77 (1%)

Query: 35  EEQEELVRSLERTQAEQSLFWRRVFAGFLFSYAVFQLYSIYQMATSPWELRYQAYFMEDM 94
           +EQEELVRSLE  QA+QS  WRRVFAGFL  YA F +YS +  A SPWELRY AYFMED+
Sbjct: 29  QEQEELVRSLEAKQAQQSRRWRRVFAGFLLGYAAFLVYSSFHHAWSPWELRYHAYFMEDL 88

Query: 95  ESWMVISAG-LPLLACL 110
            + MVI A  +  LACL
Sbjct: 89  PAPMVIIADWIAALACL 105


>B6UG01_MAIZE (tr|B6UG01) Putative uncharacterized protein OS=Zea mays PE=2 SV=1
          Length = 191

 Score = 92.8 bits (229), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 49/77 (63%), Positives = 56/77 (72%), Gaps = 1/77 (1%)

Query: 35  EEQEELVRSLERTQAEQSLFWRRVFAGFLFSYAVFQLYSIYQMATSPWELRYQAYFMEDM 94
           +EQEELVRSLE  QA+Q   WRRVFAGFL  YA F +YS +  A SPWELRY AYFMED+
Sbjct: 29  QEQEELVRSLEAKQAQQGRRWRRVFAGFLLGYAAFLVYSSFHHAWSPWELRYHAYFMEDL 88

Query: 95  ESWMVISAG-LPLLACL 110
            + MVI A  +  LACL
Sbjct: 89  PAPMVIIADWIAALACL 105


>B4FFG2_MAIZE (tr|B4FFG2) Putative uncharacterized protein OS=Zea mays PE=2 SV=1
          Length = 191

 Score = 90.9 bits (224), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 48/77 (62%), Positives = 55/77 (71%), Gaps = 1/77 (1%)

Query: 35  EEQEELVRSLERTQAEQSLFWRRVFAGFLFSYAVFQLYSIYQMATSPWELRYQAYFMEDM 94
           +EQEELVRSLE  QA+Q   WRRVFAGFL  Y  F +YS +  A SPWELRY AYFMED+
Sbjct: 29  QEQEELVRSLEAKQAQQGRRWRRVFAGFLLGYVAFLVYSSFHHAWSPWELRYHAYFMEDL 88

Query: 95  ESWMVISAG-LPLLACL 110
            + MVI A  +  LACL
Sbjct: 89  PAPMVIIADWIAALACL 105


>D7MFB5_ARALY (tr|D7MFB5) Putative uncharacterized protein OS=Arabidopsis lyrata
           subsp. lyrata GN=ARALYDRAFT_913938 PE=4 SV=1
          Length = 198

 Score = 87.4 bits (215), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 53/111 (47%), Positives = 64/111 (57%), Gaps = 2/111 (1%)

Query: 1   MKKLARNWRKSHEEKXXXX-XXXXXXXXXXXXXXXEEQEELVRSLERTQAEQSLFWRRVF 59
           MKKLAR WR++  ++                    +EQEE VRSLE   A+QS  WR VF
Sbjct: 1   MKKLARKWRRTRRDEDDDKFVLPTSDDVDSRPIDTQEQEEHVRSLEEAHAQQSRQWRSVF 60

Query: 60  AGFLFSYAVFQLYSIYQMATSPWELRYQAYFMEDMESWMVISAG-LPLLAC 109
              L  Y  F  YSI Q   SPWELRY AYFMED++SWMVISA  + ++AC
Sbjct: 61  VVLLICYGAFLFYSILQQFVSPWELRYHAYFMEDLKSWMVISAEWIAIMAC 111


>Q8RXC0_ARATH (tr|Q8RXC0) Putative uncharacterized protein OS=Arabidopsis
           thaliana GN=At4g26240 PE=2 SV=1
          Length = 198

 Score = 86.7 bits (213), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 52/111 (46%), Positives = 65/111 (58%), Gaps = 2/111 (1%)

Query: 1   MKKLARNWRKSHEEKXXXX-XXXXXXXXXXXXXXXEEQEELVRSLERTQAEQSLFWRRVF 59
           MKKLAR WR++  ++                    +EQEE VR LE   A+QSL WR VF
Sbjct: 1   MKKLARKWRRTRRDEDDDKFVLPTSEDVDSRPIDTQEQEEYVRYLEEAHAQQSLQWRSVF 60

Query: 60  AGFLFSYAVFQLYSIYQMATSPWELRYQAYFMEDMESWMVISAG-LPLLAC 109
              L  +  F  YSI+Q   SPWELRY AYFMED++SWMVISA  + ++AC
Sbjct: 61  VVLLICFGAFLFYSIFQQFMSPWELRYHAYFMEDLKSWMVISAEWIAIMAC 111


>B4FEK5_MAIZE (tr|B4FEK5) Putative uncharacterized protein OS=Zea mays PE=4
          SV=1
          Length = 108

 Score = 65.1 bits (157), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/50 (64%), Positives = 36/50 (72%)

Query: 35 EEQEELVRSLERTQAEQSLFWRRVFAGFLFSYAVFQLYSIYQMATSPWEL 84
          +EQEELVRSLE  QA+Q   WRRVFAGFL  Y  F +YS +  A SPWEL
Sbjct: 29 QEQEELVRSLEAKQAQQGRRWRRVFAGFLLGYVAFLVYSSFHHAWSPWEL 78


>B9P6Y9_POPTR (tr|B9P6Y9) Predicted protein (Fragment) OS=Populus trichocarpa
          GN=POPTRDRAFT_679276 PE=4 SV=1
          Length = 73

 Score = 64.3 bits (155), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/73 (49%), Positives = 41/73 (56%), Gaps = 2/73 (2%)

Query: 1  MKKLARNWRKSHEEKXXXXXXXXXXXXXXXXXXXEEQEELVRSLERTQAEQSLFWRRVFA 60
          MKKLARNWRKS E                      EQEEL+ SLER +AEQS+ WRRV  
Sbjct: 3  MKKLARNWRKSCE--VDKFALPIRDEDDSRPMDTREQEELILSLEREEAEQSVLWRRVVG 60

Query: 61 GFLFSYAVFQLYS 73
          G +F +A F LYS
Sbjct: 61 GIVFCHAAFLLYS 73


>Q9STR0_ARATH (tr|Q9STR0) Putative uncharacterized protein T25K17.50 (Fragment)
          OS=Arabidopsis thaliana GN=T25K17.50 PE=4 SV=1
          Length = 91

 Score = 53.9 bits (128), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 43/85 (50%), Gaps = 1/85 (1%)

Query: 1  MKKLARNWRKSHEEKXXXX-XXXXXXXXXXXXXXXEEQEELVRSLERTQAEQSLFWRRVF 59
          MKKLAR WR++  ++                    +EQEE VR LE   A+QSL WR VF
Sbjct: 1  MKKLARKWRRTRRDEDDDKFVLPTSEDVDSRPIDTQEQEEYVRYLEEAHAQQSLQWRSVF 60

Query: 60 AGFLFSYAVFQLYSIYQMATSPWEL 84
             L  +  F  YSI+Q   SPWEL
Sbjct: 61 VVLLICFGAFLFYSIFQQFMSPWEL 85