Jatropha Genome Database

JcCB0471851.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0471851.10 + phase: 0 /partial
         (156 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9HVQ1_POPTR (tr|B9HVQ1) Predicted protein OS=Populus trichocarp...   132   2e-29
B9HJL7_POPTR (tr|B9HJL7) Predicted protein OS=Populus trichocarp...   122   2e-26
A5B1E5_VITVI (tr|A5B1E5) Putative uncharacterized protein OS=Vit...   103   6e-21
D7T8D7_VITVI (tr|D7T8D7) Whole genome shotgun sequence of line P...   103   9e-21
C6SXI1_SOYBN (tr|C6SXI1) Putative uncharacterized protein OS=Gly...    65   3e-09

>B9HVQ1_POPTR (tr|B9HVQ1) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_822038 PE=4 SV=1
          Length = 277

 Score =  132 bits (331), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/148 (58%), Positives = 110/148 (74%), Gaps = 12/148 (8%)

Query: 17  TGYLEDALLEFSERSKRRRLLLYTGD----HHQIKKSNDHLAKSYCNANY-DWE-MSENF 70
           TGYLEDALLEF+ERSKRRRLLL++ +    H Q +KSND    ++   N+ DWE MSENF
Sbjct: 50  TGYLEDALLEFNERSKRRRLLLFSTEHDHAHDQYEKSNDLPESNWNEENFDDWELMSENF 109

Query: 71  SCMSYITSSINGVSDGPISTSISDISEEANAITEMKTPEEELISASHETLD-SSSSPYKD 129
           SC+S+IT  I G SD P++TS+S+ SEEAN I+E+KTPEE +  ++ ETLD SSSS YKD
Sbjct: 110 SCLSHIT-GIRGTSDEPMTTSMSNTSEEANVISEIKTPEEGI--SAPETLDYSSSSSYKD 166

Query: 130 SAKTKSIFDKENQFQS--DDEEKRKKRV 155
            A T SIF+K+N   S  DD EKRK+R+
Sbjct: 167 LAGTNSIFEKDNIPHSSDDDGEKRKRRL 194


>B9HJL7_POPTR (tr|B9HJL7) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_766239 PE=4 SV=1
          Length = 261

 Score =  122 bits (305), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/142 (56%), Positives = 102/142 (71%), Gaps = 7/142 (4%)

Query: 17  TGYLEDALLEFSERSKRRRLLLYTGDHHQIKKSNDHLAKSYCN-ANY-DWE-MSENFSCM 73
           TGYLEDALLEF+E SKRRRLLL+  DH    + ++HL +S  N  N+ DWE MSENFSCM
Sbjct: 37  TGYLEDALLEFNEPSKRRRLLLFATDHDDQSEKSNHLPESNWNEENFDDWELMSENFSCM 96

Query: 74  SYITSSINGVSDGPISTSISDISEEANAITEMKTPEEELISASHETLD-SSSSPYKDSAK 132
           S+IT    G SD  +STS+S+ S+EAN I+E+ TP E++  ++ ETLD SSSS YKD A 
Sbjct: 97  SHIT-GFRGPSDELVSTSVSNTSDEANVISEITTPGEKI--SAPETLDYSSSSSYKDLAA 153

Query: 133 TKSIFDKENQFQSDDEEKRKKR 154
           T SIF+KEN   S D+ + K+R
Sbjct: 154 TNSIFEKENSPHSTDDHENKRR 175


>A5B1E5_VITVI (tr|A5B1E5) Putative uncharacterized protein OS=Vitis vinifera
           GN=VITISV_004738 PE=4 SV=1
          Length = 441

 Score =  103 bits (257), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/152 (48%), Positives = 97/152 (63%), Gaps = 18/152 (11%)

Query: 17  TGYLEDALLEFSERSKRRRLLLYTGDHHQIKKSNDHLAKSY--CNANYDWEMSENFSCMS 74
           TGYL+DAL+EFS+RSKRRRLLLYT   H+    ND L K+Y   N N  W++SENF+CM+
Sbjct: 214 TGYLQDALVEFSDRSKRRRLLLYT--DHETNSPND-LMKTYWNMNPNCTWDLSENFNCMN 270

Query: 75  YITSSINGVSDGPISTSISD--ISEEANAITEMKTPEEELISASHETLDSSSSPYKD-SA 131
            I +SI GVS  PI+ S     ISEE     +MKTPEE +  ++ E LDSSSS YK+ S 
Sbjct: 271 QI-ASIGGVSAEPINGSAMSGMISEEEPTFADMKTPEETV--SALEALDSSSSSYKEYSV 327

Query: 132 KTKSIFDKENQFQSDD-------EEKRKKRVI 156
            TKS+ +K+     D        + K+KK++I
Sbjct: 328 NTKSVSEKDTLCSIDPLPPSTGGDHKKKKKLI 359


>D7T8D7_VITVI (tr|D7T8D7) Whole genome shotgun sequence of line PN40024,
           scaffold_11.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00011569001 PE=4 SV=1
          Length = 283

 Score =  103 bits (256), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 74/152 (48%), Positives = 98/152 (64%), Gaps = 18/152 (11%)

Query: 17  TGYLEDALLEFSERSKRRRLLLYTGDHHQIKKSNDHLAKSYCNANYD--WEMSENFSCMS 74
           TGYL+DAL+EFS+RSKRRRLLLYT   H+    ND L K+Y N N +  W++SENF+CM+
Sbjct: 56  TGYLQDALVEFSDRSKRRRLLLYT--DHETNSPND-LMKTYWNMNPNCTWDLSENFNCMN 112

Query: 75  YITSSINGVSDGPISTSISD--ISEEANAITEMKTPEEELISASHETLDSSSSPYKD-SA 131
            I +SI GVS  PI+ S     ISEE     +MKTPEE +  ++ E LDSSSS YK+ S 
Sbjct: 113 QI-ASIGGVSAEPINGSAMSGMISEEEPTFADMKTPEETV--SALEALDSSSSSYKEYSV 169

Query: 132 KTKSIFDKENQFQSD-------DEEKRKKRVI 156
            TKS+ +K+     D        + K+KK++I
Sbjct: 170 NTKSVSEKDTLCSIDPLPPSTGGDHKKKKKLI 201


>C6SXI1_SOYBN (tr|C6SXI1) Putative uncharacterized protein OS=Glycine max PE=2
           SV=1
          Length = 240

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/100 (48%), Positives = 56/100 (56%), Gaps = 9/100 (9%)

Query: 17  TGYLEDALLEFSERSKRRRLLLYTGDHHQIKKSNDHLAKSYCNANYDWEMSE---NFSCM 73
           TGYLEDAL+E  ERSKRRR+L    D H  K   D L +S+ N N  W       NF CM
Sbjct: 20  TGYLEDALIESCERSKRRRVLPCAADEHS-KSFIDDLEQSFWNFNPLWNQPVENFNFYCM 78

Query: 74  SYITSSINGVSDGPISTSISDISEEANA-ITEMKTPEEEL 112
           + I     G SD  ISTS    SEEAN  + + KTPEE +
Sbjct: 79  NQI-ERFCGFSDEHISTS---RSEEANILLADTKTPEETI 114