Jatropha Genome Database
- JcCB0460891.10
BLASTP 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0460891.10 - phase: 0
(121 letters)
Database: trembl
11,636,205 sequences; 3,746,823,912 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
B9HQW5_POPTR (tr|B9HQW5) Predicted protein OS=Populus trichocarp... 98 3e-19
B9H1Z1_POPTR (tr|B9H1Z1) Predicted protein (Fragment) OS=Populus... 98 3e-19
D7TCY0_VITVI (tr|D7TCY0) Whole genome shotgun sequence of line P... 96 9e-19
B9SCQ9_RICCO (tr|B9SCQ9) Oxidoreductase, putative OS=Ricinus com... 83 8e-15
B9SST7_RICCO (tr|B9SST7) Male sterility protein, putative OS=Ric... 71 3e-11
B9HQW3_POPTR (tr|B9HQW3) Predicted protein OS=Populus trichocarp... 64 6e-09
B9H1Z2_POPTR (tr|B9H1Z2) Predicted protein OS=Populus trichocarp... 63 9e-09
B9SCQ8_RICCO (tr|B9SCQ8) Male sterility protein, putative OS=Ric... 61 4e-08
Q5QIV3_HEVBR (tr|Q5QIV3) Acyl CoA reductase OS=Hevea brasiliensi... 60 9e-08
B9NDW4_POPTR (tr|B9NDW4) Predicted protein OS=Populus trichocarp... 60 1e-07
D7MGF5_ARALY (tr|D7MGF5) Predicted protein OS=Arabidopsis lyrata... 58 3e-07
D7TCY1_VITVI (tr|D7TCY1) Whole genome shotgun sequence of line P... 57 8e-07
>B9HQW5_POPTR (tr|B9HQW5) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_649125 PE=4 SV=1
Length = 382
Score = 98.2 bits (243), Expect = 3e-19, Method: Composition-based stats.
Identities = 45/66 (68%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
Query: 13 HTNEPSDNAM---GSSVRNPVRYSNLQDFGLSYFTRNPWIGKDEKPVKVGKVKVLDNMNS 69
H N PS+NA+ GSSVRNP+RY+N QD G +YFT PWIGKD KPVKVG+VKVL +M S
Sbjct: 216 HANRPSENAIYQVGSSVRNPMRYTNFQDCGFNYFTNKPWIGKDGKPVKVGRVKVLSSMAS 275
Query: 70 FPRYMA 75
F RYMA
Sbjct: 276 FHRYMA 281
>B9H1Z1_POPTR (tr|B9H1Z1) Predicted protein (Fragment) OS=Populus trichocarpa
GN=POPTRDRAFT_196461 PE=4 SV=1
Length = 378
Score = 98.2 bits (243), Expect = 3e-19, Method: Composition-based stats.
Identities = 45/66 (68%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
Query: 13 HTNEPSDNAM---GSSVRNPVRYSNLQDFGLSYFTRNPWIGKDEKPVKVGKVKVLDNMNS 69
H N P D+A+ GSSVRNPVRY+NLQDFG YFT+ PWIGKD KPVKVG+VKVL +M +
Sbjct: 213 HANRPFDDAIYQVGSSVRNPVRYTNLQDFGFDYFTKKPWIGKDGKPVKVGRVKVLSSMAN 272
Query: 70 FPRYMA 75
F YMA
Sbjct: 273 FHGYMA 278
>D7TCY0_VITVI (tr|D7TCY0) Whole genome shotgun sequence of line PN40024,
scaffold_80.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00036171001 PE=4 SV=1
Length = 490
Score = 96.3 bits (238), Expect = 9e-19, Method: Composition-based stats.
Identities = 45/65 (69%), Positives = 51/65 (78%), Gaps = 2/65 (3%)
Query: 13 HTNEPSD--NAMGSSVRNPVRYSNLQDFGLSYFTRNPWIGKDEKPVKVGKVKVLDNMNSF 70
H N+P + +GSSV+NPVRYSNLQDFGL YFT+NPWI KD K VKVGKV VL M+SF
Sbjct: 325 HANQPCEVIYQVGSSVKNPVRYSNLQDFGLRYFTKNPWINKDGKAVKVGKVTVLSTMDSF 384
Query: 71 PRYMA 75
RYMA
Sbjct: 385 HRYMA 389
>B9SCQ9_RICCO (tr|B9SCQ9) Oxidoreductase, putative OS=Ricinus communis
GN=RCOM_1279620 PE=4 SV=1
Length = 414
Score = 83.2 bits (204), Expect = 8e-15, Method: Composition-based stats.
Identities = 48/66 (72%), Positives = 57/66 (86%), Gaps = 3/66 (4%)
Query: 13 HTNEPSDNAM---GSSVRNPVRYSNLQDFGLSYFTRNPWIGKDEKPVKVGKVKVLDNMNS 69
H N PS+NA+ GSSVR+P+RY+NLQD+GL+YFT+ PWIGKD KPVKVGKVKVLD+M S
Sbjct: 248 HANRPSENAIYQVGSSVRHPLRYANLQDYGLNYFTKKPWIGKDGKPVKVGKVKVLDSMAS 307
Query: 70 FPRYMA 75
F RYMA
Sbjct: 308 FRRYMA 313
>B9SST7_RICCO (tr|B9SST7) Male sterility protein, putative OS=Ricinus communis
GN=RCOM_0791890 PE=4 SV=1
Length = 493
Score = 71.2 bits (173), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/54 (55%), Positives = 40/54 (74%)
Query: 22 MGSSVRNPVRYSNLQDFGLSYFTRNPWIGKDEKPVKVGKVKVLDNMNSFPRYMA 75
+GSS+RNP+++SN+ DF YF+ NPWI K+ PVK+GK VL +M SF YMA
Sbjct: 337 IGSSLRNPLKFSNIHDFAYRYFSANPWIDKEGSPVKIGKGIVLSSMTSFHMYMA 390
>B9HQW3_POPTR (tr|B9HQW3) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_767177 PE=4 SV=1
Length = 489
Score = 63.5 bits (153), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/54 (53%), Positives = 37/54 (68%)
Query: 22 MGSSVRNPVRYSNLQDFGLSYFTRNPWIGKDEKPVKVGKVKVLDNMNSFPRYMA 75
+GSS RNPV SNL DF YF+ +PWI K+ + VK+GK VL +M+ F YMA
Sbjct: 336 LGSSFRNPVNISNLHDFIFRYFSEHPWINKEGESVKIGKGIVLSSMSKFYTYMA 389
>B9H1Z2_POPTR (tr|B9H1Z2) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_836660 PE=4 SV=1
Length = 490
Score = 63.2 bits (152), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 38/53 (71%)
Query: 22 MGSSVRNPVRYSNLQDFGLSYFTRNPWIGKDEKPVKVGKVKVLDNMNSFPRYM 74
+GSS+RNPV++SNL DF YF+ NPWI K+ + VK+G+ V +M+ F YM
Sbjct: 336 LGSSLRNPVKFSNLHDFSFRYFSENPWINKEGEVVKIGRGTVFSSMSKFYTYM 388
>B9SCQ8_RICCO (tr|B9SCQ8) Male sterility protein, putative OS=Ricinus communis
GN=RCOM_1279610 PE=4 SV=1
Length = 493
Score = 61.2 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 22 MGSSVRNPVRYSNLQDFGLSYFTRNPWIGKDEKPVKVGKVKVLDNMNSFPRYMA 75
+GSS+RNP++ S++ DF YF+ NPWI K+ PVK K +L +M F YMA
Sbjct: 337 IGSSLRNPLKLSSVNDFSYRYFSANPWINKEGVPVKTSKAIILSSMTKFYIYMA 390
>Q5QIV3_HEVBR (tr|Q5QIV3) Acyl CoA reductase OS=Hevea brasiliensis PE=2 SV=1
Length = 382
Score = 59.7 bits (143), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 46/66 (69%), Gaps = 4/66 (6%)
Query: 13 HTNEPSDNAM---GSSVRNPVRYSNLQDFGLSYFTRNPWIGKDEKPVK-VGKVKVLDNMN 68
H N+P D + GSSVRNP+R S+ +D+ + +FT+ PWI ++ KPVK V K +L+ ++
Sbjct: 216 HANQPCDEVIYHVGSSVRNPIRCSSFKDYLIRHFTKKPWINQNGKPVKVVSKPTMLNCVS 275
Query: 69 SFPRYM 74
+F R++
Sbjct: 276 NFQRFI 281
>B9NDW4_POPTR (tr|B9NDW4) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_593665 PE=4 SV=1
Length = 340
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 38/54 (70%)
Query: 22 MGSSVRNPVRYSNLQDFGLSYFTRNPWIGKDEKPVKVGKVKVLDNMNSFPRYMA 75
+GSS+RNP +SNL + Y+T+NP I K+ KP+KVGK+K +M +F YMA
Sbjct: 183 VGSSLRNPFTFSNLNELFFLYYTQNPLIDKEGKPIKVGKIKAFRSMATFRIYMA 236
>D7MGF5_ARALY (tr|D7MGF5) Predicted protein OS=Arabidopsis lyrata subsp. lyrata
GN=ARALYDRAFT_656637 PE=4 SV=1
Length = 493
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 22 MGSSVRNPVRYSNLQDFGLSYFTRNPWIGKDEKPVKVGKVKVLDNMNSFPRYMA 75
+GSS+RNP++ + + YF+ NPWI K+ K V+VG +++L +M SF RYM
Sbjct: 340 VGSSLRNPMKNAKFPELAYRYFSTNPWINKEGKVVRVGNIEILSSMRSFHRYMT 393
>D7TCY1_VITVI (tr|D7TCY1) Whole genome shotgun sequence of line PN40024,
scaffold_80.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00036173001 PE=4 SV=1
Length = 490
Score = 56.6 bits (135), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 13 HTNEPSD--NAMGSSVRNPVRYSNLQDFGLSYFTRNPWIGKDEKPVKVGKVKVLDNMNSF 70
H N+P + +GSS++NP++ +L DF YF NPWI KD K VKV K+ + F
Sbjct: 325 HANQPCEIIYQVGSSLKNPLKLLDLHDFFFKYFHENPWINKDGKAVKVSKLILFSTTFVF 384
Query: 71 PRYMA 75
Y+A
Sbjct: 385 HGYLA 389