Jatropha Genome Database

JcCB0449991.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0449991.10 + phase: 0 /partial
         (233 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9RAY0_RICCO (tr|B9RAY0) Ubiquitin-protein ligase, putative OS=R...    99   4e-19
B9RI98_RICCO (tr|B9RI98) Ubiquitin-protein ligase, putative OS=R...    80   2e-13
Q6ZF73_ORYSJ (tr|Q6ZF73) Putative uncharacterized protein OS=Ory...    58   8e-07
C5Y399_SORBI (tr|C5Y399) Putative uncharacterized protein Sb05g0...    56   3e-06

>B9RAY0_RICCO (tr|B9RAY0) Ubiquitin-protein ligase, putative OS=Ricinus communis
           GN=RCOM_1509630 PE=4 SV=1
          Length = 457

 Score = 99.0 bits (245), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 114/260 (43%), Gaps = 34/260 (13%)

Query: 1   MIRFDLDKTSANEIDNWLHFALSRRVQRLE----------FNFDSKVIPEVSRCYTLSMA 50
           ++ FDL   S   +D W++FA+S+ ++RLE          F F  +       CY+    
Sbjct: 107 IVSFDLTCNSRRSLDKWMNFAMSKTLKRLEISLAPFSSRKFRFHDECYSFPVDCYSFIRG 166

Query: 51  HAGSSCIKSLTSVSLTNVDVTAEVLEHFLSNCPNXXXXXXXXXXXXXXXKVAGPSPFRLK 110
             G S I SL S+ L  V++T EV+EHFL NCP                KV   S  RLK
Sbjct: 167 PEGLSNISSLRSLCLRYVNMTGEVVEHFLLNCPLLEQLTVAVAYRLESLKVPA-SSLRLK 225

Query: 111 HLEIQYCQDFGQLEICAPNLVYF------GYLGRKMRLHIVH----------APSLIHVY 154
           +LEI  C      EICAPNLV         Y GR+M+L  VH           P L  + 
Sbjct: 226 YLEIFDCYHLKNFEICAPNLVTILYNQGGRYNGRRMKLQAVHLPHLLDLHLGGPEL-SIT 284

Query: 155 LSYYCLDSPTFVXXXXXXXXXXXXXXXXDFSTILQMPNIPELTNLKHLVIGGCADSHD-- 212
             ++   S +F                 +    L+ P  PELTNL+HL   G    +D  
Sbjct: 285 EDFFGACSSSF-SQLMTLKIVVTEVRMQECQVRLKFPKFPELTNLRHL---GFKTEYDIC 340

Query: 213 SLLWIDPLLKACPSLQKLSL 232
           S+L +  L+K+ P L K +L
Sbjct: 341 SILAVRLLIKSSPLLNKFTL 360


>B9RI98_RICCO (tr|B9RI98) Ubiquitin-protein ligase, putative OS=Ricinus communis
           GN=RCOM_1577330 PE=4 SV=1
          Length = 464

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 104/251 (41%), Gaps = 32/251 (12%)

Query: 2   IRFDLDKTSANEIDNWLHFALSRRVQRLEFNFDSKVIPEV--SRCYTLSMAHAGSSCIKS 59
           I FDLD     EID+W+  A+ +RV+RLE +  + + P +  +  Y         S   S
Sbjct: 124 ICFDLDSDFMYEIDSWITIAMQKRVKRLEIDL-TNIEPSIKTTGSYAFPSGLLNDSSFSS 182

Query: 60  LTSVSLTNVDVTAEVLEH-FLSNCPNXXXXXXXXXXXXXXXKVAGPSPFRLKHLEIQYCQ 118
           L ++ L  VDVT E L+H  LS CP                KV+G S  +LK+LE+  C 
Sbjct: 183 LKTLQLNMVDVTGEALQHLLLSWCPLLEVLSIVNSTSLVSLKVSG-SSLKLKYLEMVCCN 241

Query: 119 DFGQLEICAPNLVYFGYLGRKMRLHIVHAPSLIHV---------------YLSYYCLDSP 163
           +   LEI A +LV F Y G  + L     P+L+                   S Y L   
Sbjct: 242 NLKYLEITAASLVSFKYYGPLIGLPFKSVPNLVDASFGGPFCQLTIENLYQFSLYILQLE 301

Query: 164 TFVXXXXXXXXXXXXXXXXDFSTILQMPNIPELTNLKHL-VIGGCADSHDSLLWIDPLLK 222
           T                  +F T     N P L+N+KHL V    +     L     LLK
Sbjct: 302 TL------RFDVGSAYLMREFPT-----NFPILSNVKHLEVTTAVSAVAHCLFPCLSLLK 350

Query: 223 ACPSLQKLSLR 233
            CP L + +L+
Sbjct: 351 GCPLLHRFTLK 361


>Q6ZF73_ORYSJ (tr|Q6ZF73) Putative uncharacterized protein OS=Oryza sativa subsp.
           japonica GN=P0013G11.35 PE=4 SV=1
          Length = 534

 Score = 58.2 bits (139), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 83/196 (42%), Gaps = 11/196 (5%)

Query: 46  TLSMAHAGSSCIKSLTSVSLTNVDVTAEVLEHFLSNCPNXXXXXXXXXXXXXXXKVAGPS 105
           TLS+   G +  KSL  +S T + ++ ++++  + NCPN               K+A P 
Sbjct: 234 TLSIP-VGFAGFKSLVELSFTEMHISEDMIQTLIENCPNLECFRLRLCSGARHLKIASPH 292

Query: 106 PFRLKHLEIQYCQDFGQLEICAPNLVYFGYLGRKMRLHIVHAPSLIHVYLSYYCL---DS 162
             +L+ + ++ C     +E+ AP L  F Y G  + + +   P + H  L Y      +S
Sbjct: 293 -LQLREIMVKSCLQITHMELFAPKLQQFTYRGPCISMVLSSVPLMEHACLDYEGRRDGES 351

Query: 163 PTFVXXXXXXXXXXXXXXXXDFSTI-LQMPNIPELT-----NLKHLVIGGCADSHDSLLW 216
             ++                  +T  L+ P IPE+      NLK L +G     +D + W
Sbjct: 352 VKYILGKLSQDFSLLTSLSIVLNTYRLKNPVIPEVVPTPFKNLKSLTLGAIMHCNDDIGW 411

Query: 217 IDPLLKACPSLQKLSL 232
           +  LL+  P L+   +
Sbjct: 412 VTMLLEVAPVLESFQI 427


>C5Y399_SORBI (tr|C5Y399) Putative uncharacterized protein Sb05g019620 OS=Sorghum
           bicolor GN=Sb05g019620 PE=4 SV=1
          Length = 523

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 75/171 (43%), Gaps = 27/171 (15%)

Query: 14  IDNWLHFALSRRV----------QRLEFNFDSKVIPEVSRC----YTLSMAHAGSS---- 55
           +D WL  A + R+          Q +++NF   V   V R     ++LS+    S+    
Sbjct: 149 VDRWLQVAFTSRIENFHLSMIEGQDIKYNFPCSVFSIVQRSSIQSFSLSVCSFHSAPQVG 208

Query: 56  CIKSLTSVSLTNVDVTAEVLEHFLSNCPNXXXXXXXXXXXXXXXKVAGPSPFRLKHLEIQ 115
           C+ SLT++ L++V VT E L  FLSN                  ++    P  LK L I 
Sbjct: 209 CMSSLTNLKLSSVHVTGEELYGFLSNSCALKQIYLSNCEDIICLRI----PCLLKELNIL 264

Query: 116 Y---CQDFGQLEICAPNLVYFGYLGRKMRLHIVHAPSLIHVYLSYYCLDSP 163
               C +   +E  APNL  F Y+G ++R+   HAP +  V    Y  DSP
Sbjct: 265 IVFSCLNLEVIESNAPNLSIFSYVGDQIRISFGHAPQVREVTFHNY--DSP 313