Jatropha Genome Database
- JcCB0432541.10
BLASTP 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0432541.10 + phase: 0 /pseudo/partial
(163 letters)
Database: trembl
11,636,205 sequences; 3,746,823,912 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
B9RIC0_RICCO (tr|B9RIC0) Origin recognition complex subunit, put... 97 4e-19
B9HNV8_POPTR (tr|B9HNV8) Predicted protein OS=Populus trichocarp... 92 2e-17
Q9SU24_ARATH (tr|Q9SU24) Origin recognition complex 1b protein O... 88 3e-16
D7M142_ARALY (tr|D7M142) ATORC1B/ORC1B/UNE13 OS=Arabidopsis lyra... 88 4e-16
D7SL58_VITVI (tr|D7SL58) Whole genome shotgun sequence of line P... 87 6e-16
O23326_ARATH (tr|O23326) Replication control protein 1 like OS=A... 87 7e-16
Q710E8_ARATH (tr|Q710E8) Origin recognition complex 1a protein O... 87 7e-16
D7UDS2_VITVI (tr|D7UDS2) Whole genome shotgun sequence of line P... 86 1e-15
D7MGX5_ARALY (tr|D7MGX5) Putative uncharacterized protein (Fragm... 86 2e-15
Q94G49_ARATH (tr|Q94G49) Origin recognition complex 1 OS=Arabido... 84 5e-15
C5Z5V0_SORBI (tr|C5Z5V0) Putative uncharacterized protein Sb10g0... 81 3e-14
Q945C8_MAIZE (tr|Q945C8) Origin recognition complex subunit 1 OS... 80 6e-14
Q5SMU7_ORYSJ (tr|Q5SMU7) Putative origin recognition complex 1 O... 79 2e-13
Q0DDZ5_ORYSJ (tr|Q0DDZ5) Os06g0187000 protein OS=Oryza sativa su... 79 2e-13
Q9MB44_ORYSJ (tr|Q9MB44) Origin recognition complex 1 OS=Oryza s... 78 3e-13
A9SL85_PHYPA (tr|A9SL85) Predicted protein OS=Physcomitrella pat... 75 2e-12
B8B3M1_ORYSI (tr|B8B3M1) Putative uncharacterized protein OS=Ory... 75 3e-12
>B9RIC0_RICCO (tr|B9RIC0) Origin recognition complex subunit, putative OS=Ricinus
communis GN=RCOM_1577650 PE=4 SV=1
Length = 844
Score = 97.4 bits (241), Expect = 4e-19, Method: Composition-based stats.
Identities = 44/46 (95%), Positives = 45/46 (97%)
Query: 118 LGESRIILCEPGARHRLQKLQLNFPSDDVAFALKGSQELPWLAKYL 163
LGESRII CEPGARHRLQKLQLNFPSDDVAFALKGS+ELPWLAKYL
Sbjct: 799 LGESRIIQCEPGARHRLQKLQLNFPSDDVAFALKGSKELPWLAKYL 844
>B9HNV8_POPTR (tr|B9HNV8) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_1087966 PE=4 SV=1
Length = 814
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/46 (91%), Positives = 44/46 (95%)
Query: 118 LGESRIILCEPGARHRLQKLQLNFPSDDVAFALKGSQELPWLAKYL 163
LGESRIILCEPGARH LQKLQLNFPSDDVAFALK S+E+PWLAKYL
Sbjct: 769 LGESRIILCEPGARHSLQKLQLNFPSDDVAFALKDSKEIPWLAKYL 814
>Q9SU24_ARATH (tr|Q9SU24) Origin recognition complex 1b protein OS=Arabidopsis
thaliana GN=orc1b PE=1 SV=1
Length = 813
Score = 88.2 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 38/47 (80%), Positives = 43/47 (91%)
Query: 117 ELGESRIILCEPGARHRLQKLQLNFPSDDVAFALKGSQELPWLAKYL 163
+LGE RIILCEPG +HRLQKLQLNFPSDDVAFALK +++LPWLA YL
Sbjct: 767 DLGECRIILCEPGEKHRLQKLQLNFPSDDVAFALKDNKDLPWLANYL 813
>D7M142_ARALY (tr|D7M142) ATORC1B/ORC1B/UNE13 OS=Arabidopsis lyrata subsp. lyrata
GN=ARALYDRAFT_490065 PE=4 SV=1
Length = 816
Score = 87.8 bits (216), Expect = 4e-16, Method: Composition-based stats.
Identities = 38/47 (80%), Positives = 43/47 (91%)
Query: 117 ELGESRIILCEPGARHRLQKLQLNFPSDDVAFALKGSQELPWLAKYL 163
+LGE RIILCEPG +HRLQKLQLNFPSDDVAFALK +++LPWLA YL
Sbjct: 770 DLGECRIILCEPGEKHRLQKLQLNFPSDDVAFALKDNKDLPWLANYL 816
>D7SL58_VITVI (tr|D7SL58) Whole genome shotgun sequence of line PN40024,
scaffold_4.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00025279001 PE=4 SV=1
Length = 979
Score = 87.0 bits (214), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/47 (85%), Positives = 43/47 (91%)
Query: 117 ELGESRIILCEPGARHRLQKLQLNFPSDDVAFALKGSQELPWLAKYL 163
+LGE RIILCE GA+HRLQKLQLNFPSDDVAFALK +ELPWLAKYL
Sbjct: 933 KLGECRIILCEAGAKHRLQKLQLNFPSDDVAFALKDDKELPWLAKYL 979
>O23326_ARATH (tr|O23326) Replication control protein 1 like OS=Arabidopsis
thaliana GN=dl3390w PE=2 SV=1
Length = 771
Score = 86.7 bits (213), Expect = 7e-16, Method: Composition-based stats.
Identities = 37/47 (78%), Positives = 43/47 (91%)
Query: 117 ELGESRIILCEPGARHRLQKLQLNFPSDDVAFALKGSQELPWLAKYL 163
+LGE RI+LCEPG +HRLQKLQLNFPSDDVAFALK +++LPWLA YL
Sbjct: 725 DLGECRIVLCEPGEKHRLQKLQLNFPSDDVAFALKDNKDLPWLANYL 771
>Q710E8_ARATH (tr|Q710E8) Origin recognition complex 1a protein OS=Arabidopsis
thaliana GN=At4g14700 PE=2 SV=1
Length = 809
Score = 86.7 bits (213), Expect = 7e-16, Method: Composition-based stats.
Identities = 37/47 (78%), Positives = 43/47 (91%)
Query: 117 ELGESRIILCEPGARHRLQKLQLNFPSDDVAFALKGSQELPWLAKYL 163
+LGE RI+LCEPG +HRLQKLQLNFPSDDVAFALK +++LPWLA YL
Sbjct: 763 DLGECRIVLCEPGEKHRLQKLQLNFPSDDVAFALKDNKDLPWLANYL 809
>D7UDS2_VITVI (tr|D7UDS2) Whole genome shotgun sequence of line PN40024,
scaffold_175.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00001926001 PE=4 SV=1
Length = 87
Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/47 (85%), Positives = 42/47 (89%)
Query: 117 ELGESRIILCEPGARHRLQKLQLNFPSDDVAFALKGSQELPWLAKYL 163
+LGE RIILCE GA HRLQKLQLNFPSDDVAFALK +ELPWLAKYL
Sbjct: 41 KLGECRIILCEAGATHRLQKLQLNFPSDDVAFALKDDKELPWLAKYL 87
>D7MGX5_ARALY (tr|D7MGX5) Putative uncharacterized protein (Fragment)
OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_493435
PE=4 SV=1
Length = 662
Score = 85.5 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 114 LS*ELGESRIILCEPGARHRLQKLQLNFPSDDVAFALKGSQELPWLAKYL 163
+S +LGE RI+LCEPG +HRLQKLQLNFPSDDVAFALK +++LPWL YL
Sbjct: 613 ISCDLGECRIVLCEPGEKHRLQKLQLNFPSDDVAFALKDNKDLPWLPNYL 662
>Q94G49_ARATH (tr|Q94G49) Origin recognition complex 1 OS=Arabidopsis thaliana
PE=2 SV=1
Length = 809
Score = 84.0 bits (206), Expect = 5e-15, Method: Composition-based stats.
Identities = 36/47 (76%), Positives = 41/47 (87%)
Query: 117 ELGESRIILCEPGARHRLQKLQLNFPSDDVAFALKGSQELPWLAKYL 163
+LGE RI LCEPG +HRLQKLQLNFPSDDVAFALK +++LPWLA Y
Sbjct: 763 DLGECRIALCEPGEKHRLQKLQLNFPSDDVAFALKDNKDLPWLANYF 809
>C5Z5V0_SORBI (tr|C5Z5V0) Putative uncharacterized protein Sb10g005910 OS=Sorghum
bicolor GN=Sb10g005910 PE=4 SV=1
Length = 810
Score = 81.3 bits (199), Expect = 3e-14, Method: Composition-based stats.
Identities = 34/47 (72%), Positives = 43/47 (91%)
Query: 117 ELGESRIILCEPGARHRLQKLQLNFPSDDVAFALKGSQELPWLAKYL 163
+LGES+IILCE G++H+LQKLQLN+PSDDV FALK S +LPW++KYL
Sbjct: 764 KLGESKIILCEEGSKHKLQKLQLNYPSDDVTFALKESTDLPWISKYL 810
>Q945C8_MAIZE (tr|Q945C8) Origin recognition complex subunit 1 OS=Zea mays
GN=orc1 PE=2 SV=1
Length = 810
Score = 80.5 bits (197), Expect = 6e-14, Method: Composition-based stats.
Identities = 34/47 (72%), Positives = 42/47 (89%)
Query: 117 ELGESRIILCEPGARHRLQKLQLNFPSDDVAFALKGSQELPWLAKYL 163
+LGES+IILCE G +H+LQK+QLN+PSDDV FALK S +LPWL+KYL
Sbjct: 764 KLGESKIILCEEGTKHKLQKVQLNYPSDDVTFALKESPDLPWLSKYL 810
>Q5SMU7_ORYSJ (tr|Q5SMU7) Putative origin recognition complex 1 OS=Oryza sativa
subsp. japonica GN=P0470C02.11 PE=2 SV=1
Length = 814
Score = 78.6 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/47 (70%), Positives = 41/47 (87%)
Query: 117 ELGESRIILCEPGARHRLQKLQLNFPSDDVAFALKGSQELPWLAKYL 163
+LGE +IILCE G +H+LQKLQLN+PSDDV FALK S ++PWL+KYL
Sbjct: 768 KLGEGKIILCEEGTKHKLQKLQLNYPSDDVTFALKESPDIPWLSKYL 814
>Q0DDZ5_ORYSJ (tr|Q0DDZ5) Os06g0187000 protein OS=Oryza sativa subsp. japonica
GN=Os06g0187000 PE=4 SV=1
Length = 812
Score = 78.6 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/47 (70%), Positives = 41/47 (87%)
Query: 117 ELGESRIILCEPGARHRLQKLQLNFPSDDVAFALKGSQELPWLAKYL 163
+LGE +IILCE G +H+LQKLQLN+PSDDV FALK S ++PWL+KYL
Sbjct: 766 KLGEGKIILCEEGTKHKLQKLQLNYPSDDVTFALKESPDIPWLSKYL 812
>Q9MB44_ORYSJ (tr|Q9MB44) Origin recognition complex 1 OS=Oryza sativa subsp.
japonica GN=OsORC1 PE=2 SV=2
Length = 812
Score = 77.8 bits (190), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/47 (68%), Positives = 40/47 (85%)
Query: 117 ELGESRIILCEPGARHRLQKLQLNFPSDDVAFALKGSQELPWLAKYL 163
+LGE +II CE G +H+LQKLQLN+PSDDV FALK S ++PWL+KYL
Sbjct: 766 KLGEGKIIFCEEGTKHKLQKLQLNYPSDDVTFALKESPDIPWLSKYL 812
>A9SL85_PHYPA (tr|A9SL85) Predicted protein OS=Physcomitrella patens subsp.
patens GN=PHYPADRAFT_131736 PE=4 SV=1
Length = 756
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 42/54 (77%)
Query: 110 LVGTLS*ELGESRIILCEPGARHRLQKLQLNFPSDDVAFALKGSQELPWLAKYL 163
L+ T+ +LG SRI+LCEP RHR QKLQLNFP DDV FALK +EL WL+KYL
Sbjct: 703 LIMTVGCKLGVSRILLCEPAIRHRHQKLQLNFPCDDVQFALKDDKELSWLSKYL 756
>B8B3M1_ORYSI (tr|B8B3M1) Putative uncharacterized protein OS=Oryza sativa subsp.
indica GN=OsI_21955 PE=4 SV=1
Length = 1043
Score = 74.7 bits (182), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/47 (68%), Positives = 40/47 (85%)
Query: 117 ELGESRIILCEPGARHRLQKLQLNFPSDDVAFALKGSQELPWLAKYL 163
+L ES+IILCE G +H+LQKLQLN+PSDDV FALK S ++PWL+K L
Sbjct: 659 KLSESKIILCEEGTKHKLQKLQLNYPSDDVTFALKESPDIPWLSKTL 705