Jatropha Genome Database

JcCB0432051.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0432051.10 - phase: 0 /partial
         (170 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9S0S6_RICCO (tr|B9S0S6) U3 small nucleolar RNA-interacting prot...   107   4e-22
B9H467_POPTR (tr|B9H467) Predicted protein OS=Populus trichocarp...    90   7e-17
B9HEQ2_POPTR (tr|B9HEQ2) Predicted protein (Fragment) OS=Populus...    83   1e-14
Q9M0V4_ARATH (tr|Q9M0V4) U3 snoRNP-associated-like protein OS=Ar...    82   2e-14
D7MFE9_ARALY (tr|D7MFE9) EMB2271 OS=Arabidopsis lyrata subsp. ly...    79   2e-13
D7TKH3_VITVI (tr|D7TKH3) Whole genome shotgun sequence of line P...    77   5e-13
A5AH15_VITVI (tr|A5AH15) Putative uncharacterized protein OS=Vit...    77   6e-13
D7M2J2_ARALY (tr|D7M2J2) Transducin family protein OS=Arabidopsi...    63   1e-08
O49554_ARATH (tr|O49554) Putative uncharacterized protein AT4g21...    58   3e-07
Q3MKM6_ARATH (tr|Q3MKM6) U3-55K-like protein 2 OS=Arabidopsis th...    58   4e-07

>B9S0S6_RICCO (tr|B9S0S6) U3 small nucleolar RNA-interacting protein, putative
           OS=Ricinus communis GN=RCOM_1223140 PE=4 SV=1
          Length = 572

 Score =  107 bits (268), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 72/150 (48%), Positives = 83/150 (55%), Gaps = 3/150 (2%)

Query: 24  EDPFFSKESKKRRKMDYNDDYIESGESEEENGFLSGGXXXXXXXXXXXXXXXXX--TADE 81
           +DPFF+ ESKKRRK +Y DDYIESG  E +    +                     TA E
Sbjct: 18  QDPFFNTESKKRRKNEYRDDYIESGGEESDEENNNNNNNNGFSNSGDEKEREDEKETAQE 77

Query: 82  KRQRVAKAYVXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXSRVLKKLMQAQLEESGRLR 140
           KRQR+AKAY+                               S V+  L++ QLE+SGRLR
Sbjct: 78  KRQRLAKAYLEKRREILRREEEEAEEEGEDNGRCEKEGERDSLVVNMLLKEQLEDSGRLR 137

Query: 141 RAIASRVEKPETVGGFEVLVKHRHSVTAVC 170
           RAIASRVEKPETVGGFEVLVKHRHSVTAVC
Sbjct: 138 RAIASRVEKPETVGGFEVLVKHRHSVTAVC 167


>B9H467_POPTR (tr|B9H467) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_558393 PE=4 SV=1
          Length = 502

 Score = 90.1 bits (222), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 53/93 (56%), Positives = 57/93 (61%), Gaps = 1/93 (1%)

Query: 78  TADEKRQRVAKAYVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRVLKKLMQAQLEESG 137
           TA+EKRQR+AKA V                              S V KKLMQ QLEESG
Sbjct: 77  TAEEKRQRIAKAVVENLRAREKELEGEEDEEGDREFEKEGERDSS-VAKKLMQQQLEESG 135

Query: 138 RLRRAIASRVEKPETVGGFEVLVKHRHSVTAVC 170
           RLRRAIASRV+KPE+V GFEVLVKHR SVTAVC
Sbjct: 136 RLRRAIASRVQKPESVDGFEVLVKHRQSVTAVC 168


>B9HEQ2_POPTR (tr|B9HEQ2) Predicted protein (Fragment) OS=Populus trichocarpa
           GN=POPTRDRAFT_217089 PE=4 SV=1
          Length = 500

 Score = 82.8 bits (203), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 39/49 (79%), Positives = 44/49 (89%)

Query: 122 SRVLKKLMQAQLEESGRLRRAIASRVEKPETVGGFEVLVKHRHSVTAVC 170
           S V KKLMQ QLE+SGRLRRAIASRV+KPE+V GFE+LVKHR SVTA+C
Sbjct: 122 SFVAKKLMQQQLEDSGRLRRAIASRVQKPESVDGFEILVKHRQSVTAIC 170


>Q9M0V4_ARATH (tr|Q9M0V4) U3 snoRNP-associated-like protein OS=Arabidopsis
           thaliana GN=At4g05410 PE=2 SV=1
          Length = 504

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/149 (38%), Positives = 74/149 (49%), Gaps = 8/149 (5%)

Query: 25  DPFFSKESKKRRKMDYNDDYIESGESE-EENGFLSGGXXXXXXXXXXXXXX--XXXTADE 81
           DPFF +E KKRRK+ Y+DD IES +S+ EENGF  G                    TA E
Sbjct: 25  DPFFEEEPKKRRKVSYDDDDIESVDSDAEENGFTGGDEDGRRVDGEVEDEDEFADETAGE 84

Query: 82  KRQRVAKAYVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRVLKKLMQAQLEESGRLRR 141
           KR+R+A+  +                                + K LMQ Q E+SGR+RR
Sbjct: 85  KRKRLAEEMLNRRREAMRREREEADNDDDDDEDDDET-----IKKSLMQKQQEDSGRIRR 139

Query: 142 AIASRVEKPETVGGFEVLVKHRHSVTAVC 170
            IASRV++P +  GF V+VKHR SV +V 
Sbjct: 140 LIASRVQEPLSTDGFSVIVKHRRSVVSVA 168


>D7MFE9_ARALY (tr|D7MFE9) EMB2271 OS=Arabidopsis lyrata subsp. lyrata
           GN=ARALYDRAFT_492774 PE=4 SV=1
          Length = 468

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/148 (37%), Positives = 71/148 (47%), Gaps = 17/148 (11%)

Query: 22  FNEDPFFSKESKKRRKMDYNDDYIESGESEEENGFLSGGXXXXXXXXXXXXXXXXXTADE 81
            + DPFF +E+KKR K +YNDD IES ESEEE                        T  E
Sbjct: 22  IDRDPFFEEETKKRGKFNYNDDDIESVESEEEG----------KVGEEIEDKFAYETVGE 71

Query: 82  KRQRVAKAYVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRVLKKLMQAQLEESGRLRR 141
           KR+R  +                                 S V+K LMQ QLE+SGR+RR
Sbjct: 72  KRKRFLE-------ETSDRIEEAKRKEREEDDEEDDGVRDSLVVKTLMQEQLEKSGRVRR 124

Query: 142 AIASRVEKPETVGGFEVLVKHRHSVTAV 169
           AIASRV++P +   F ++VKH+ SVTAV
Sbjct: 125 AIASRVQEPRSSDEFRIIVKHQQSVTAV 152


>D7TKH3_VITVI (tr|D7TKH3) Whole genome shotgun sequence of line PN40024,
           scaffold_3.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00021618001 PE=4 SV=1
          Length = 519

 Score = 77.4 bits (189), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 62/149 (41%), Positives = 72/149 (48%), Gaps = 3/149 (2%)

Query: 22  FNEDPFFSKESKKRRKM-DYNDDYIESGESEEENGFLSGGXXXXXXXXXXXXXXXXXTAD 80
            +ED FF  ESK+RRK  D + +       EE++   +G                  TAD
Sbjct: 24  IDEDSFFRHESKRRRKAKDEDAEDDIIESEEEDDEEGTGSDADGLEERQEEDEFAAETAD 83

Query: 81  EKRQRVAKAYVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRVLKKLMQAQLEESGRLR 140
           EKR RVAKAYV                              S V + L Q QLEESGR+R
Sbjct: 84  EKRLRVAKAYVEKIRGIVSREREDEEESERAEEREGQRD--SLVAQILQQEQLEESGRVR 141

Query: 141 RAIASRVEKPETVGGFEVLVKHRHSVTAV 169
           R IASRV+KPETV  F VLVKHR SVTAV
Sbjct: 142 RLIASRVQKPETVDEFRVLVKHRQSVTAV 170


>A5AH15_VITVI (tr|A5AH15) Putative uncharacterized protein OS=Vitis vinifera
           GN=VITISV_042496 PE=4 SV=1
          Length = 573

 Score = 77.0 bits (188), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 62/149 (41%), Positives = 72/149 (48%), Gaps = 3/149 (2%)

Query: 22  FNEDPFFSKESKKRRKM-DYNDDYIESGESEEENGFLSGGXXXXXXXXXXXXXXXXXTAD 80
            +ED FF  ESK+RRK  D + +       EE++   +G                  TAD
Sbjct: 24  IDEDSFFRHESKRRRKAKDEDAEDDIIESEEEDDEEGTGSDADGLEERQEEDEFAAETAD 83

Query: 81  EKRQRVAKAYVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRVLKKLMQAQLEESGRLR 140
           EKR RVAKAYV                              S V + L Q QLEESGR+R
Sbjct: 84  EKRLRVAKAYVEKIRGIVSREREDEEESERAEEREGQRD--SLVAQILQQEQLEESGRVR 141

Query: 141 RAIASRVEKPETVGGFEVLVKHRHSVTAV 169
           R IASRV+KPETV  F VLVKHR SVTAV
Sbjct: 142 RLIASRVQKPETVDEFRVLVKHRQSVTAV 170


>D7M2J2_ARALY (tr|D7M2J2) Transducin family protein OS=Arabidopsis lyrata subsp.
           lyrata GN=ARALYDRAFT_490186 PE=4 SV=1
          Length = 503

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/148 (36%), Positives = 72/148 (48%), Gaps = 9/148 (6%)

Query: 25  DPFFSKESKKRRKMDYNDDYIESGESE-EENGFLSGGXXXXXXXXXXXXXX--XXXTADE 81
           DPFF +E KKRRK+ Y+DD IES +S+ EENGF  G                    T  E
Sbjct: 25  DPFFEEEPKKRRKVSYDDDDIESIDSDAEENGFTGGDEDGRRVDVEVVEEDEFADETVGE 84

Query: 82  KRQRVAKAYVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRVLKKLMQAQLEESGRLRR 141
           K++R+ +  +                                + K LMQ Q EESGR+RR
Sbjct: 85  KKKRLTEDMLNRLREAKRREREEAGDDDDDEDDDES------IKKILMQKQQEESGRIRR 138

Query: 142 AIASRVEKPETVGGFEVLVKHRHSVTAV 169
            IASRV++P +  GF ++VKHR SV +V
Sbjct: 139 VIASRVQEPLSTDGFSIIVKHRRSVVSV 166


>O49554_ARATH (tr|O49554) Putative uncharacterized protein AT4g21130
           OS=Arabidopsis thaliana GN=F7J7.70 PE=2 SV=1
          Length = 537

 Score = 58.2 bits (139), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/149 (35%), Positives = 70/149 (46%), Gaps = 18/149 (12%)

Query: 22  FNEDPFFSKESKKRRKMDYNDDY-IESGESEEENGFLSGGXXXXXXXXXXXXXXXXXTAD 80
            + DPF  +E++KRRK +Y+DD  IES ESEEE                        T  
Sbjct: 20  IDHDPFLEEETEKRRKFNYDDDDDIESVESEEEG----------KVGEEVEDEFAHETVG 69

Query: 81  EKRQRVAKAYVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRVLKKLMQAQLEESGRLR 140
           EKR+R+A+  +                              S V K LMQ QLE+SGR+R
Sbjct: 70  EKRKRLAEDTLNRIEEAKQREHEEDNEEDDDFRD-------SLVAKTLMQEQLEKSGRVR 122

Query: 141 RAIASRVEKPETVGGFEVLVKHRHSVTAV 169
           RA A RV+  ++   F V+VKH+HSVT V
Sbjct: 123 RANALRVQDLQSSDKFRVIVKHQHSVTGV 151


>Q3MKM6_ARATH (tr|Q3MKM6) U3-55K-like protein 2 OS=Arabidopsis thaliana
           GN=At4g21130 PE=2 SV=1
          Length = 479

 Score = 57.8 bits (138), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 53/149 (35%), Positives = 70/149 (46%), Gaps = 18/149 (12%)

Query: 22  FNEDPFFSKESKKRRKMDYNDDY-IESGESEEENGFLSGGXXXXXXXXXXXXXXXXXTAD 80
            + DPF  +E++KRRK +Y+DD  IES ESEEE                        T  
Sbjct: 20  IDHDPFLEEETEKRRKFNYDDDDDIESVESEEEG----------KVGEEVEDEFAHETVG 69

Query: 81  EKRQRVAKAYVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRVLKKLMQAQLEESGRLR 140
           EKR+R+A+  +                              S V K LMQ QLE+SGR+R
Sbjct: 70  EKRKRLAEDTLNRIEEAKQREHEEDNEEDDDFRD-------SLVAKTLMQEQLEKSGRVR 122

Query: 141 RAIASRVEKPETVGGFEVLVKHRHSVTAV 169
           RA A RV+  ++   F V+VKH+HSVT V
Sbjct: 123 RANALRVQDLQSSDKFRVIVKHQHSVTGV 151