Jatropha Genome Database

JcCB0427111.20
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0427111.20 - phase: 0 
         (54 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

C6T0D6_SOYBN (tr|C6T0D6) Putative uncharacterized protein OS=Gly...    55   4e-06
C6T0E4_SOYBN (tr|C6T0E4) Putative uncharacterized protein OS=Gly...    54   4e-06

>C6T0D6_SOYBN (tr|C6T0D6) Putative uncharacterized protein OS=Glycine max PE=4
          SV=1
          Length = 73

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/42 (66%), Positives = 30/42 (71%)

Query: 13 WEDKEEGKEVTQQWEXXXXXXXXXXXFSLQLRRELEKSTEKN 54
          W+DKEEGKEVTQQWE           FSLQLRRELE +TEKN
Sbjct: 32 WDDKEEGKEVTQQWEDDWDDDDVSDDFSLQLRRELESNTEKN 73


>C6T0E4_SOYBN (tr|C6T0E4) Putative uncharacterized protein OS=Glycine max PE=4
          SV=1
          Length = 73

 Score = 54.3 bits (129), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/42 (66%), Positives = 30/42 (71%)

Query: 13 WEDKEEGKEVTQQWEXXXXXXXXXXXFSLQLRRELEKSTEKN 54
          W+DKEEGKEVTQQWE           FSLQLRRELE +TEKN
Sbjct: 32 WDDKEEGKEVTQQWEDDWDDDDVSDDFSLQLRRELESNTEKN 73