Jatropha Genome Database
- JcCB0424111.10
BLASTP 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0424111.10 + phase: 2 /partial
(103 letters)
Database: trembl
11,636,205 sequences; 3,746,823,912 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
B6TRW3_MAIZE (tr|B6TRW3) DNA-directed RNA polymerase subunit OS=... 184 2e-45
C5YPS4_SORBI (tr|C5YPS4) DNA-directed RNA polymerase subunit OS=... 184 4e-45
B9HWY2_POPTR (tr|B9HWY2) DNA-directed RNA polymerase subunit OS=... 181 2e-44
Q2QNM4_ORYSJ (tr|Q2QNM4) DNA-directed RNA polymerase subunit OS=... 180 4e-44
A2ZLM4_ORYSI (tr|A2ZLM4) DNA-directed RNA polymerase subunit OS=... 180 4e-44
Q0IMM9_ORYSJ (tr|Q0IMM9) Os12g0560400 protein (Fragment) OS=Oryz... 180 4e-44
A5AGZ7_VITVI (tr|A5AGZ7) DNA-directed RNA polymerase subunit OS=... 180 5e-44
Q6NLH0_ARATH (tr|Q6NLH0) DNA-directed RNA polymerase subunit OS=... 179 1e-43
D7L697_ARALY (tr|D7L697) Putative uncharacterized protein OS=Ara... 179 1e-43
C6SXF5_SOYBN (tr|C6SXF5) DNA-directed RNA polymerase subunit OS=... 178 2e-43
Q8L5V0_ARATH (tr|Q8L5V0) DNA-directed RNA polymerase subunit OS=... 178 2e-43
D7M9X1_ARALY (tr|D7M9X1) Putative uncharacterized protein OS=Ara... 178 2e-43
Q2HU21_MEDTR (tr|Q2HU21) DNA-directed RNA polymerase subunit OS=... 176 6e-43
B9HIQ4_POPTR (tr|B9HIQ4) DNA-directed RNA polymerase subunit OS=... 175 2e-42
A9TUT9_PHYPA (tr|A9TUT9) DNA-directed RNA polymerase subunit OS=... 174 3e-42
C5YZB6_SORBI (tr|C5YZB6) DNA-directed RNA polymerase subunit OS=... 173 5e-42
C5YC89_SORBI (tr|C5YC89) DNA-directed RNA polymerase subunit OS=... 172 1e-41
B9RZN6_RICCO (tr|B9RZN6) DNA-directed RNA polymerase subunit OS=... 169 8e-41
C5Y7V5_SORBI (tr|C5Y7V5) Putative uncharacterized protein Sb05g0... 167 3e-40
B6T3H5_MAIZE (tr|B6T3H5) DNA-directed RNA polymerase subunit OS=... 167 3e-40
Q10T38_ORYSJ (tr|Q10T38) DNA-directed RNA polymerase subunit OS=... 165 1e-39
B8AL10_ORYSI (tr|B8AL10) DNA-directed RNA polymerase subunit OS=... 165 1e-39
Q10T39_ORYSJ (tr|Q10T39) DNA-directed RNA polymerase subunit OS=... 153 7e-36
C3XRA2_BRAFL (tr|C3XRA2) DNA-directed RNA polymerase subunit OS=... 137 3e-31
Q5EAU6_XENLA (tr|Q5EAU6) DNA-directed RNA polymerase subunit OS=... 134 5e-30
Q1LVK2_DANRE (tr|Q1LVK2) DNA-directed RNA polymerase subunit OS=... 133 5e-30
Q55GG8_DICDI (tr|Q55GG8) DNA-directed RNA polymerase subunit OS=... 133 6e-30
B7PRG9_IXOSC (tr|B7PRG9) DNA-directed RNA polymerase subunit OS=... 133 7e-30
Q4S925_TETNG (tr|Q4S925) DNA-directed RNA polymerase subunit (Fr... 132 9e-30
C1BGM4_ONCMY (tr|C1BGM4) DNA-directed RNA polymerase subunit OS=... 132 1e-29
B5FX75_TAEGU (tr|B5FX75) DNA-directed RNA polymerase subunit OS=... 132 1e-29
D4A531_RAT (tr|D4A531) DNA-directed RNA polymerase subunit OS=Ra... 132 1e-29
D2HFU4_AILME (tr|D2HFU4) DNA-directed RNA polymerase subunit (Fr... 132 1e-29
Q5XJ93_DANRE (tr|Q5XJ93) DNA-directed RNA polymerase subunit OS=... 131 2e-29
C1BH34_ONCMY (tr|C1BH34) DNA-directed RNA polymerase subunit OS=... 130 4e-29
C4WT20_ACYPI (tr|C4WT20) DNA-directed RNA polymerase subunit OS=... 129 1e-28
D3YYI3_MOUSE (tr|D3YYI3) DNA-directed RNA polymerase subunit OS=... 129 1e-28
B0W4J8_CULQU (tr|B0W4J8) DNA-directed RNA polymerase subunit OS=... 129 1e-28
Q8GSD5_ORYSJ (tr|Q8GSD5) Putative RNA Polymerase II subunit 14.5... 128 2e-28
B7FNR6_DROME (tr|B7FNR6) DNA-directed RNA polymerase subunit (Fr... 127 4e-28
B4QZW6_DROSI (tr|B4QZW6) DNA-directed RNA polymerase subunit OS=... 127 5e-28
B4PT93_DROYA (tr|B4PT93) DNA-directed RNA polymerase subunit OS=... 127 5e-28
B4HEP4_DROSE (tr|B4HEP4) DNA-directed RNA polymerase subunit OS=... 127 5e-28
B3P0P5_DROER (tr|B3P0P5) DNA-directed RNA polymerase subunit OS=... 127 5e-28
B4NAN1_DROWI (tr|B4NAN1) DNA-directed RNA polymerase subunit OS=... 127 5e-28
Q299B2_DROPS (tr|Q299B2) DNA-directed RNA polymerase subunit OS=... 127 5e-28
B4G4Z3_DROPE (tr|B4G4Z3) DNA-directed RNA polymerase subunit OS=... 127 5e-28
B6UEU6_MAIZE (tr|B6UEU6) DNA-directed RNA polymerase II 14.5 kDa... 127 6e-28
B3LZX4_DROAN (tr|B3LZX4) DNA-directed RNA polymerase subunit OS=... 126 8e-28
D2A4H0_TRICA (tr|D2A4H0) DNA-directed RNA polymerase subunit OS=... 126 8e-28
Q1HRD6_AEDAE (tr|Q1HRD6) DNA-directed RNA polymerase subunit OS=... 126 9e-28
A7SXH3_NEMVE (tr|A7SXH3) DNA-directed RNA polymerase subunit OS=... 126 9e-28
B4MBD3_DROVI (tr|B4MBD3) DNA-directed RNA polymerase subunit OS=... 125 1e-27
B6U7D6_MAIZE (tr|B6U7D6) DNA-directed RNA polymerase II 14.5 kDa... 125 1e-27
Q7Q4H0_ANOGA (tr|Q7Q4H0) DNA-directed RNA polymerase subunit (Fr... 125 2e-27
A8QDP3_BRUMA (tr|A8QDP3) DNA-directed RNA polymerase subunit OS=... 124 3e-27
B4JS70_DROGR (tr|B4JS70) DNA-directed RNA polymerase subunit OS=... 123 5e-27
B6U3L3_MAIZE (tr|B6U3L3) DNA-directed RNA polymerase II 14.5 kDa... 123 6e-27
C1BNL8_9MAXI (tr|C1BNL8) DNA-directed RNA polymerase subunit OS=... 121 3e-26
B4KC63_DROMO (tr|B4KC63) DNA-directed RNA polymerase subunit OS=... 120 4e-26
Q0D4N8_ORYSJ (tr|Q0D4N8) Os07g0615800 protein OS=Oryza sativa su... 117 3e-25
Q965S0_CAEEL (tr|Q965S0) DNA-directed RNA polymerase subunit OS=... 117 4e-25
Q6QAQ8_PIG (tr|Q6QAQ8) DNA-directed RNA polymerase subunit (Frag... 113 5e-24
B3RJJ7_TRIAD (tr|B3RJJ7) DNA-directed RNA polymerase subunit OS=... 112 1e-23
D3BKZ5_POLPA (tr|D3BKZ5) RNA polymerase II core subunit OS=Polys... 110 4e-23
C1FE61_9CHLO (tr|C1FE61) DNA-directed RNA polymerase subunit OS=... 109 9e-23
A4RSQ4_OSTLU (tr|A4RSQ4) DNA-directed RNA polymerase subunit OS=... 108 3e-22
D3Z3Z8_MOUSE (tr|D3Z3Z8) Putative uncharacterized protein Polr2i... 108 3e-22
Q5DAX2_SCHJA (tr|Q5DAX2) DNA-directed RNA polymerase subunit OS=... 107 5e-22
C1LZL1_SCHMA (tr|C1LZL1) DNA-directed RNA polymerase subunit OS=... 106 8e-22
A8XD45_CAEBR (tr|A8XD45) DNA-directed RNA polymerase subunit OS=... 105 1e-21
C1MJZ9_MICPS (tr|C1MJZ9) Predicted protein OS=Micromonas pusilla... 101 3e-20
D7M9S4_ARALY (tr|D7M9S4) Putative uncharacterized protein OS=Ara... 100 4e-20
A3LYD6_PICST (tr|A3LYD6) DNA-directed RNA polymerase subunit OS=... 99 2e-19
Q6BK95_DEBHA (tr|Q6BK95) DNA-directed RNA polymerase subunit OS=... 98 2e-19
B6JXI0_SCHJY (tr|B6JXI0) DNA-directed RNA polymerase subunit OS=... 98 4e-19
B4FHU6_MAIZE (tr|B4FHU6) Putative uncharacterized protein OS=Zea... 96 9e-19
Q59Z24_CANAL (tr|Q59Z24) DNA-directed RNA polymerase subunit OS=... 95 2e-18
C4YCH6_CLAL4 (tr|C4YCH6) DNA-directed RNA polymerase subunit OS=... 95 3e-18
C4QY79_PICPG (tr|C4QY79) DNA-directed RNA polymerase subunit OS=... 94 4e-18
B9WC06_CANDC (tr|B9WC06) DNA-directed RNA polymerase subunit OS=... 94 4e-18
A5DAZ0_PICGU (tr|A5DAZ0) DNA-directed RNA polymerase subunit OS=... 93 1e-17
C5M7A5_CANTT (tr|C5M7A5) DNA-directed RNA polymerase subunit OS=... 92 2e-17
B6Q946_PENMQ (tr|B6Q946) DNA-directed RNA polymerase subunit OS=... 92 2e-17
C6H4I7_AJECH (tr|C6H4I7) DNA-directed RNA polymerase subunit OS=... 91 5e-17
C0NM38_AJECG (tr|C0NM38) DNA-directed RNA polymerase subunit OS=... 91 5e-17
C5XE10_SORBI (tr|C5XE10) Putative uncharacterized protein Sb02g0... 90 9e-17
C5PHU6_COCP7 (tr|C5PHU6) DNA-directed RNA polymerase subunit OS=... 89 2e-16
B8NBS3_ASPFN (tr|B8NBS3) DNA-directed RNA polymerase subunit OS=... 89 2e-16
A2QZ75_ASPNC (tr|A2QZ75) Contig An12c0110, complete genome. OS=A... 88 3e-16
C9SDJ5_VERA1 (tr|C9SDJ5) DNA-directed RNA polymerase subunit OS=... 88 3e-16
C7Z7Z8_NECH7 (tr|C7Z7Z8) DNA-directed RNA polymerase subunit OS=... 88 4e-16
C1GD69_PARBD (tr|C1GD69) DNA-directed RNA polymerase subunit OS=... 87 4e-16
C0SHR0_PARBP (tr|C0SHR0) DNA-directed RNA polymerase subunit OS=... 87 4e-16
A5DYL7_LODEL (tr|A5DYL7) DNA-directed RNA polymerase subunit OS=... 87 8e-16
Q4X1W6_ASPFU (tr|Q4X1W6) DNA-directed RNA polymerase subunit OS=... 87 8e-16
B6H263_PENCW (tr|B6H263) DNA-directed RNA polymerase subunit OS=... 87 8e-16
B8BUI2_THAPS (tr|B8BUI2) Predicted protein OS=Thalassiosira pseu... 85 2e-15
B2WH54_PYRTR (tr|B2WH54) DNA-directed RNA polymerase subunit OS=... 84 5e-15
A8IJY1_CHLRE (tr|A8IJY1) DNA-directed RNA polymerase subunit OS=... 83 8e-15
D5GJJ3_9PEZI (tr|D5GJJ3) DNA-directed RNA polymerase subunit OS=... 83 9e-15
B7FQG9_PHATR (tr|B7FQG9) Predicted protein OS=Phaeodactylum tric... 82 2e-14
Q6CS79_KLULA (tr|Q6CS79) DNA-directed RNA polymerase subunit OS=... 81 3e-14
B0D4Y9_LACBS (tr|B0D4Y9) DNA-directed RNA polymerase subunit OS=... 81 3e-14
Q4UDQ7_THEAN (tr|Q4UDQ7) DNA-directed RNA polymerase 2 subunit, ... 80 6e-14
Q4N5T6_THEPA (tr|Q4N5T6) DNA-directed RNA polymerase II subunit,... 80 7e-14
B6Q947_PENMQ (tr|B6Q947) DNA-directed RNA polymerase subunit OS=... 80 8e-14
A4R9M8_MAGGR (tr|A4R9M8) DNA-directed RNA polymerase subunit OS=... 80 9e-14
C5E010_ZYGRC (tr|C5E010) DNA-directed RNA polymerase subunit OS=... 79 2e-13
C5E2E3_LACTC (tr|C5E2E3) DNA-directed RNA polymerase subunit OS=... 79 2e-13
D6VU72_YEAST (tr|D6VU72) B12.6 OS=Saccharomyces cerevisiae S288c... 79 2e-13
C8Z8H7_YEAS8 (tr|C8Z8H7) DNA-directed RNA polymerase subunit OS=... 79 2e-13
C7GW42_YEAS2 (tr|C7GW42) DNA-directed RNA polymerase subunit OS=... 79 2e-13
B3LHD8_YEAS1 (tr|B3LHD8) DNA-directed RNA polymerase subunit OS=... 79 2e-13
A6ZUA7_YEAS7 (tr|A6ZUA7) DNA-directed RNA polymerase subunit OS=... 79 2e-13
A7TJ44_VANPO (tr|A7TJ44) DNA-directed RNA polymerase subunit OS=... 78 3e-13
A8NUD2_COPC7 (tr|A8NUD2) DNA-directed RNA polymerase subunit OS=... 78 4e-13
A7AUU3_BABBO (tr|A7AUU3) DNA-directed RNA polymerase subunit OS=... 77 9e-13
B9HWY4_POPTR (tr|B9HWY4) Predicted protein OS=Populus trichocarp... 75 3e-12
Q6C1C2_YARLI (tr|Q6C1C2) DNA-directed RNA polymerase subunit OS=... 74 4e-12
B8BIJ1_ORYSI (tr|B8BIJ1) Putative uncharacterized protein OS=Ory... 72 2e-11
B6AGF8_CRYMR (tr|B6AGF8) DNA-directed RNA polymerase subunit OS=... 70 8e-11
Q5CUQ6_CRYPV (tr|Q5CUQ6) DNA-directed RNA polymerase 2 subunit O... 70 9e-11
Q5CPB7_CRYHO (tr|Q5CPB7) DNA-directed RNA polymerase 2 subunit O... 70 9e-11
Q55M04_CRYNE (tr|Q55M04) DNA-directed RNA polymerase subunit OS=... 70 9e-11
B6KIX4_TOXGO (tr|B6KIX4) DNA-directed RNA polymerase II subunit,... 69 2e-10
D0N1Q1_PHYIN (tr|D0N1Q1) Putative uncharacterized protein OS=Phy... 69 2e-10
B3KZH4_PLAKH (tr|B3KZH4) Dna-directed rna polymerase 2 subunit, ... 68 3e-10
C5KKK6_9ALVE (tr|C5KKK6) DNA-directed RNA polymerase 2 subunit, ... 67 9e-10
Q8I241_PLAF7 (tr|Q8I241) DNA-directed RNA polymerase 2, putative... 66 1e-09
Q4YUV5_PLABE (tr|Q4YUV5) DNA-directed RNA polymerase ii 15.1 kDa... 65 2e-09
C5LSH6_9ALVE (tr|C5LSH6) DNA-directed RNA polymerase 2 subunit, ... 65 2e-09
A5KDM5_PLAVI (tr|A5KDM5) DNA-directed RNA polymerase 2 subunit, ... 65 2e-09
B9PUJ5_TOXGO (tr|B9PUJ5) DNA-directed RNA polymerase II subunit,... 65 3e-09
C5KP35_9ALVE (tr|C5KP35) DNA-directed RNA polymerase ii 15.1 kDa... 63 1e-08
Q4X293_PLACH (tr|Q4X293) DNA-directed RNA polymerase 2 subunit, ... 63 1e-08
Q4DHB0_TRYCR (tr|Q4DHB0) DNA-direcetd RNA polymerase II, subunit... 62 2e-08
D2VT19_NAEGR (tr|D2VT19) Predicted protein OS=Naegleria gruberi ... 62 2e-08
Q4DME4_TRYCR (tr|Q4DME4) DNA-direcetd RNA polymerase II, subunit... 62 2e-08
Q7RSD7_PLAYO (tr|Q7RSD7) DNA-directed RNA polymerase ii 15.1 kDa... 61 4e-08
Q384T7_9TRYP (tr|Q384T7) DNA-direcetd RNA polymerase II, subunit... 60 7e-08
D0A7R2_TRYBG (tr|D0A7R2) DNA-direcetd RNA polymerase II, subunit... 60 7e-08
A6RCK2_AJECN (tr|A6RCK2) DNA-directed RNA polymerase subunit OS=... 59 2e-07
A7EUD0_SCLS1 (tr|A7EUD0) Putative uncharacterized protein OS=Scl... 59 2e-07
B2AV79_PODAN (tr|B2AV79) DNA-directed RNA polymerase subunit OS=... 57 5e-07
Q0C9E4_ASPTN (tr|Q0C9E4) Putative uncharacterized protein OS=Asp... 57 6e-07
B8M1I8_TALSN (tr|B8M1I8) DNA directed RNA polymerase II 15 kDa s... 56 1e-06
C4JEG2_UNCRE (tr|C4JEG2) Predicted protein OS=Uncinocarpus reesi... 56 1e-06
A9V115_MONBE (tr|A9V115) Predicted protein OS=Monosiga brevicoll... 56 1e-06
A6SDC8_BOTFB (tr|A6SDC8) Putative uncharacterized protein OS=Bot... 55 2e-06
C5JZV2_AJEDS (tr|C5JZV2) DNA directed RNA polymerase II 15 kDa s... 55 2e-06
C5G6X9_AJEDR (tr|C5G6X9) DNA directed RNA polymerase II 15 kDa s... 55 2e-06
B6Q948_PENMQ (tr|B6Q948) DNA directed RNA polymerase II 15 kDa s... 55 2e-06
Q7SBJ7_NEUCR (tr|Q7SBJ7) Predicted protein OS=Neurospora crassa ... 55 2e-06
Q0U3A2_PHANO (tr|Q0U3A2) Putative uncharacterized protein OS=Pha... 55 3e-06
Q96YA8_SULTO (tr|Q96YA8) 112aa long hypothetical DNA-directed RN... 54 5e-06
Q2TZH6_ASPOR (tr|Q2TZH6) Predicted protein OS=Aspergillus oryzae... 54 6e-06
C1H9R9_PARBA (tr|C1H9R9) Putative uncharacterized protein OS=Par... 54 6e-06
D1ZU38_SORMA (tr|D1ZU38) Whole genome shotgun sequence assembly,... 53 9e-06
C3NFY6_SULIN (tr|C3NFY6) Transcription termination factor Tfs OS... 53 9e-06
A1CSR4_ASPCL (tr|A1CSR4) DNA directed RNA polymerase II 15 kDa s... 53 1e-05
>B6TRW3_MAIZE (tr|B6TRW3) DNA-directed RNA polymerase subunit OS=Zea mays PE=3
SV=1
Length = 114
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 85/104 (81%), Positives = 95/104 (91%), Gaps = 1/104 (0%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NNILYPKED++Q++LLYACRNCDHQEVADNN VYRN V HS EFTQ+LQDVA DPTLPR
Sbjct: 11 NNILYPKEDREQKVLLYACRNCDHQEVADNNCVYRNVVHHSAGEFTQVLQDVAGDPTLPR 70
Query: 61 TKSVRCSACGHGEAVFLQATSR-EEGFTLFYVCCNPNCGNRWRD 103
TKSVRCS+CGHGEAVF QAT+R EEG TLF+VCCNP+CGNRWR+
Sbjct: 71 TKSVRCSSCGHGEAVFFQATARGEEGMTLFFVCCNPSCGNRWRE 114
>C5YPS4_SORBI (tr|C5YPS4) DNA-directed RNA polymerase subunit OS=Sorghum bicolor
GN=Sb08g018130 PE=3 SV=1
Length = 114
Score = 184 bits (466), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 84/104 (80%), Positives = 95/104 (91%), Gaps = 1/104 (0%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NNILYPKED++Q++LLYACRNCDHQEVADNN VYRN V HS EFTQ+LQDVA DPTLPR
Sbjct: 11 NNILYPKEDREQKVLLYACRNCDHQEVADNNCVYRNVVHHSAGEFTQVLQDVAGDPTLPR 70
Query: 61 TKSVRCSACGHGEAVFLQATSR-EEGFTLFYVCCNPNCGNRWRD 103
TKSVRC++CGHGEAVF QAT+R EEG TLF+VCCNP+CGNRWR+
Sbjct: 71 TKSVRCASCGHGEAVFFQATARGEEGMTLFFVCCNPSCGNRWRE 114
>B9HWY2_POPTR (tr|B9HWY2) DNA-directed RNA polymerase subunit OS=Populus
trichocarpa GN=POPTRDRAFT_805257 PE=3 SV=1
Length = 113
Score = 181 bits (460), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 81/103 (78%), Positives = 92/103 (89%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NNILYPKEDK Q+ILLYACR+CDHQEVA NNRVYRNE+ H E+TQ+LQDVASDP LPR
Sbjct: 11 NNILYPKEDKMQKILLYACRSCDHQEVAGNNRVYRNEIYHHAAEYTQVLQDVASDPALPR 70
Query: 61 TKSVRCSACGHGEAVFLQATSREEGFTLFYVCCNPNCGNRWRD 103
TKSV C+ CG+GEAVFLQAT+ +EG T+FYVCCNPNCG+RWRD
Sbjct: 71 TKSVCCAVCGYGEAVFLQATAGDEGMTMFYVCCNPNCGHRWRD 113
>Q2QNM4_ORYSJ (tr|Q2QNM4) DNA-directed RNA polymerase subunit OS=Oryza sativa
subsp. japonica GN=LOC_Os12g37370 PE=3 SV=1
Length = 114
Score = 180 bits (457), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 83/104 (79%), Positives = 93/104 (89%), Gaps = 1/104 (0%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NNILYPKED+ Q+ILLYACRNCDHQEVADNN VYRN V HS EFTQ+LQDVA DPTLPR
Sbjct: 11 NNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNVVHHSAGEFTQVLQDVAGDPTLPR 70
Query: 61 TKSVRCSACGHGEAVFLQATSR-EEGFTLFYVCCNPNCGNRWRD 103
TK+VRC+ CGHGEAVF QAT+R EEG TLF+VCCNP+CG+RWR+
Sbjct: 71 TKAVRCAVCGHGEAVFFQATARGEEGMTLFFVCCNPSCGHRWRE 114
>A2ZLM4_ORYSI (tr|A2ZLM4) DNA-directed RNA polymerase subunit OS=Oryza sativa
subsp. indica GN=OsI_38722 PE=3 SV=1
Length = 114
Score = 180 bits (457), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 83/104 (79%), Positives = 93/104 (89%), Gaps = 1/104 (0%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NNILYPKED+ Q+ILLYACRNCDHQEVADNN VYRN V HS EFTQ+LQDVA DPTLPR
Sbjct: 11 NNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNVVHHSAGEFTQVLQDVAGDPTLPR 70
Query: 61 TKSVRCSACGHGEAVFLQATSR-EEGFTLFYVCCNPNCGNRWRD 103
TK+VRC+ CGHGEAVF QAT+R EEG TLF+VCCNP+CG+RWR+
Sbjct: 71 TKAVRCAVCGHGEAVFFQATARGEEGMTLFFVCCNPSCGHRWRE 114
>Q0IMM9_ORYSJ (tr|Q0IMM9) Os12g0560400 protein (Fragment) OS=Oryza sativa subsp.
japonica GN=Os12g0560400 PE=4 SV=1
Length = 104
Score = 180 bits (456), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 83/104 (79%), Positives = 93/104 (89%), Gaps = 1/104 (0%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NNILYPKED+ Q+ILLYACRNCDHQEVADNN VYRN V HS EFTQ+LQDVA DPTLPR
Sbjct: 1 NNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNVVHHSAGEFTQVLQDVAGDPTLPR 60
Query: 61 TKSVRCSACGHGEAVFLQATSR-EEGFTLFYVCCNPNCGNRWRD 103
TK+VRC+ CGHGEAVF QAT+R EEG TLF+VCCNP+CG+RWR+
Sbjct: 61 TKAVRCAVCGHGEAVFFQATARGEEGMTLFFVCCNPSCGHRWRE 104
>A5AGZ7_VITVI (tr|A5AGZ7) DNA-directed RNA polymerase subunit OS=Vitis vinifera
GN=VITISV_024186 PE=3 SV=1
Length = 114
Score = 180 bits (456), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 84/104 (80%), Positives = 94/104 (90%), Gaps = 1/104 (0%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NNILYPKED++Q+ILLYACRNCDHQEVA+NN VYRNE+ HSV E TQ+LQDVA+DPTLPR
Sbjct: 11 NNILYPKEDREQKILLYACRNCDHQEVAENNCVYRNEIHHSVGERTQVLQDVAADPTLPR 70
Query: 61 TKSVRCSACGHGEAVFLQATSR-EEGFTLFYVCCNPNCGNRWRD 103
TKSVRC+ C HGEAVF QAT+R EEG TLF+VCCNPNCG RWRD
Sbjct: 71 TKSVRCAQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGYRWRD 114
>Q6NLH0_ARATH (tr|Q6NLH0) DNA-directed RNA polymerase subunit OS=Arabidopsis
thaliana GN=At3g16980 PE=3 SV=1
Length = 114
Score = 179 bits (453), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/104 (81%), Positives = 94/104 (90%), Gaps = 1/104 (0%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NNILYPKEDK+Q+ILLYACRNCDHQEVADN+ VYRNEV HSV+E TQIL DVASDPTLPR
Sbjct: 11 NNILYPKEDKEQKILLYACRNCDHQEVADNSCVYRNEVHHSVSERTQILTDVASDPTLPR 70
Query: 61 TKSVRCSACGHGEAVFLQATSR-EEGFTLFYVCCNPNCGNRWRD 103
TK+VRCS C H EAVF QAT+R EEG TLF+VCCNPNCG+RWR+
Sbjct: 71 TKAVRCSKCQHREAVFFQATARGEEGMTLFFVCCNPNCGHRWRE 114
>D7L697_ARALY (tr|D7L697) Putative uncharacterized protein OS=Arabidopsis lyrata
subsp. lyrata GN=ARALYDRAFT_318462 PE=4 SV=1
Length = 114
Score = 179 bits (453), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 84/104 (80%), Positives = 94/104 (90%), Gaps = 1/104 (0%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NNILYPKEDK+Q+ILLYACRNCDHQEVADN+ VYRNEV HSV+E TQIL DVASDPTLPR
Sbjct: 11 NNILYPKEDKEQKILLYACRNCDHQEVADNSCVYRNEVHHSVSERTQILTDVASDPTLPR 70
Query: 61 TKSVRCSACGHGEAVFLQATSR-EEGFTLFYVCCNPNCGNRWRD 103
TK+VRC+ C H EAVF QAT+R EEG TLF+VCCNPNCG+RWR+
Sbjct: 71 TKAVRCAKCQHSEAVFFQATARGEEGMTLFFVCCNPNCGHRWRE 114
>C6SXF5_SOYBN (tr|C6SXF5) DNA-directed RNA polymerase subunit OS=Glycine max PE=3
SV=1
Length = 114
Score = 178 bits (451), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 83/104 (79%), Positives = 93/104 (89%), Gaps = 1/104 (0%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NNILYPKED+ Q++LL+ACRNCDHQEVADN VYRNE+ HSV E TQ+LQDVA+DPTLPR
Sbjct: 11 NNILYPKEDRDQKVLLFACRNCDHQEVADNFCVYRNEIHHSVGERTQVLQDVAADPTLPR 70
Query: 61 TKSVRCSACGHGEAVFLQATSR-EEGFTLFYVCCNPNCGNRWRD 103
TKSVRCS C HGEAVF QAT+R EEG TLF+VCCNPNCG+RWRD
Sbjct: 71 TKSVRCSQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114
>Q8L5V0_ARATH (tr|Q8L5V0) DNA-directed RNA polymerase subunit OS=Arabidopsis
thaliana GN=At4g16265 PE=3 SV=1
Length = 114
Score = 178 bits (451), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/104 (80%), Positives = 92/104 (88%), Gaps = 1/104 (0%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NNILYPKEDK+Q ILLYACRNCDHQE ADNN VYRNEV HSV+E TQIL DVASDPTLPR
Sbjct: 11 NNILYPKEDKEQSILLYACRNCDHQEAADNNCVYRNEVHHSVSEQTQILSDVASDPTLPR 70
Query: 61 TKSVRCSACGHGEAVFLQATSR-EEGFTLFYVCCNPNCGNRWRD 103
TK+VRC+ C HGEAVF QAT+R EEG TLF+VCCNPNC +RWR+
Sbjct: 71 TKAVRCAKCQHGEAVFFQATARGEEGMTLFFVCCNPNCSHRWRE 114
>D7M9X1_ARALY (tr|D7M9X1) Putative uncharacterized protein OS=Arabidopsis lyrata
subsp. lyrata GN=ARALYDRAFT_493259 PE=4 SV=1
Length = 114
Score = 178 bits (451), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/104 (80%), Positives = 92/104 (88%), Gaps = 1/104 (0%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NNILYPKEDK+Q ILLYACRNCDHQE ADNN VYRNEV HSV+E TQIL DVASDPTLPR
Sbjct: 11 NNILYPKEDKEQSILLYACRNCDHQEAADNNCVYRNEVHHSVSEQTQILSDVASDPTLPR 70
Query: 61 TKSVRCSACGHGEAVFLQATSR-EEGFTLFYVCCNPNCGNRWRD 103
TK+VRC+ C HGEAVF QAT+R EEG TLF+VCCNPNC +RWR+
Sbjct: 71 TKAVRCAKCQHGEAVFFQATARGEEGMTLFFVCCNPNCSHRWRE 114
>Q2HU21_MEDTR (tr|Q2HU21) DNA-directed RNA polymerase subunit OS=Medicago
truncatula GN=MtrDRAFT_AC149491g5v2 PE=3 SV=1
Length = 114
Score = 176 bits (447), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 82/104 (78%), Positives = 92/104 (88%), Gaps = 1/104 (0%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NNILYPKED++Q+ILLYACRNCDHQE ADN VYRNE+ HSV E TQ+LQDVA+DPTLPR
Sbjct: 11 NNILYPKEDREQKILLYACRNCDHQEAADNFCVYRNEIHHSVAERTQVLQDVAADPTLPR 70
Query: 61 TKSVRCSACGHGEAVFLQATSR-EEGFTLFYVCCNPNCGNRWRD 103
TK+VRC C HGEAVF QAT+R EEG TLF+VCCNPNCG+RWRD
Sbjct: 71 TKAVRCVQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114
>B9HIQ4_POPTR (tr|B9HIQ4) DNA-directed RNA polymerase subunit OS=Populus
trichocarpa GN=POPTRDRAFT_820572 PE=3 SV=1
Length = 114
Score = 175 bits (443), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 81/104 (77%), Positives = 92/104 (88%), Gaps = 1/104 (0%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NNILYP+ED+ Q+ILLYACRNCDHQE+AD+N VYRNEV HSV E TQ+LQDVA+DPTLPR
Sbjct: 11 NNILYPREDRDQKILLYACRNCDHQEIADDNCVYRNEVHHSVAERTQVLQDVAADPTLPR 70
Query: 61 TKSVRCSACGHGEAVFLQATSR-EEGFTLFYVCCNPNCGNRWRD 103
TK+V C+ C H EAVF QATSR EEG TLF+VCCNPNCG+RWRD
Sbjct: 71 TKAVTCTVCKHPEAVFFQATSRGEEGMTLFFVCCNPNCGHRWRD 114
>A9TUT9_PHYPA (tr|A9TUT9) DNA-directed RNA polymerase subunit OS=Physcomitrella
patens subsp. patens GN=PHYPADRAFT_172071 PE=3 SV=1
Length = 114
Score = 174 bits (440), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 81/104 (77%), Positives = 92/104 (88%), Gaps = 1/104 (0%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NNILYP+ED+ +++LLYACRNCDHQEVADNN VYRNEV HS E TQ+LQD+ASDPTLPR
Sbjct: 11 NNILYPREDRDKKVLLYACRNCDHQEVADNNCVYRNEVLHSADERTQVLQDIASDPTLPR 70
Query: 61 TKSVRCSACGHGEAVFLQATSR-EEGFTLFYVCCNPNCGNRWRD 103
TK+VRC+ C HGEAVF QAT+R EEG TLF+VCCNPNCG RWRD
Sbjct: 71 TKNVRCANCQHGEAVFFQATARGEEGMTLFFVCCNPNCGYRWRD 114
>C5YZB6_SORBI (tr|C5YZB6) DNA-directed RNA polymerase subunit OS=Sorghum bicolor
GN=Sb09g022760 PE=3 SV=1
Length = 114
Score = 173 bits (439), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 79/104 (75%), Positives = 93/104 (89%), Gaps = 1/104 (0%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NNILYPKE++ +R L +ACRNC+HQEV+DNN VYRNEV H+ E TQ+LQDVASDPTLPR
Sbjct: 11 NNILYPKEERDRRTLFFACRNCEHQEVSDNNCVYRNEVHHTAGERTQVLQDVASDPTLPR 70
Query: 61 TKSVRCSACGHGEAVFLQATSR-EEGFTLFYVCCNPNCGNRWRD 103
TK+VRCSACGHGEAVF QAT+R EEG TLF+VCC+P+CGNRWR+
Sbjct: 71 TKTVRCSACGHGEAVFFQATARGEEGMTLFFVCCSPDCGNRWRE 114
>C5YC89_SORBI (tr|C5YC89) DNA-directed RNA polymerase subunit OS=Sorghum bicolor
GN=Sb06g001670 PE=3 SV=1
Length = 114
Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 79/104 (75%), Positives = 93/104 (89%), Gaps = 1/104 (0%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NNILYPKED+ +R L +ACRNC+HQEV+DNN VYRNEV H+ E TQ+LQDVASDPTLPR
Sbjct: 11 NNILYPKEDRDRRTLYFACRNCEHQEVSDNNCVYRNEVHHTAGERTQVLQDVASDPTLPR 70
Query: 61 TKSVRCSACGHGEAVFLQATSR-EEGFTLFYVCCNPNCGNRWRD 103
TK+VRC+ACGHGEAVF QAT+R EEG TLF+VCC+P+CGNRWR+
Sbjct: 71 TKTVRCNACGHGEAVFFQATARGEEGMTLFFVCCSPDCGNRWRE 114
>B9RZN6_RICCO (tr|B9RZN6) DNA-directed RNA polymerase subunit OS=Ricinus communis
GN=RCOM_1000040 PE=3 SV=1
Length = 266
Score = 169 bits (428), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 78/104 (75%), Positives = 89/104 (85%), Gaps = 1/104 (0%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NNILYPKED+ Q+ILLYACRNCDHQE+A++N VYRNEV HS E TQ+LQDVA+DPTLPR
Sbjct: 163 NNILYPKEDRDQKILLYACRNCDHQEIAESNCVYRNEVHHSAAERTQVLQDVAADPTLPR 222
Query: 61 TKSVRCSACGHGEAVFLQATSR-EEGFTLFYVCCNPNCGNRWRD 103
TK+V C C H EAVF QAT+R EEG TLF+VCCNP CG+RWRD
Sbjct: 223 TKAVECQVCKHPEAVFFQATARGEEGMTLFFVCCNPICGHRWRD 266
Score = 152 bits (383), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 71/89 (79%), Positives = 78/89 (87%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYPKED+KQRILLYACRNC+HQEVAD+NRVYRNE+ HSV+E TQILQDVASDPTLPR
Sbjct: 11 NNVLYPKEDRKQRILLYACRNCEHQEVADSNRVYRNEIHHSVSEHTQILQDVASDPTLPR 70
Query: 61 TKSVRCSACGHGEAVFLQATSREEGFTLF 89
TKSVRCSACGHGEAVFLQ + L
Sbjct: 71 TKSVRCSACGHGEAVFLQGGGYDTVLRLL 99
>C5Y7V5_SORBI (tr|C5Y7V5) Putative uncharacterized protein Sb05g026420 OS=Sorghum
bicolor GN=Sb05g026420 PE=4 SV=1
Length = 109
Score = 167 bits (424), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/105 (74%), Positives = 91/105 (86%), Gaps = 2/105 (1%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQIL-QDVASDPTLP 59
NNILYPKED+ ++LLYACRNC+HQEVAD+N VYRN V H E TQ+L +DVASDPTLP
Sbjct: 5 NNILYPKEDRANKVLLYACRNCEHQEVADSNCVYRNVVDHDAGELTQVLSEDVASDPTLP 64
Query: 60 RTKSVRCSACGHGEAVFLQATSR-EEGFTLFYVCCNPNCGNRWRD 103
RTKSVRC+ACGHGEAVF QAT+R E+G LF+VCCNP+CG+RWRD
Sbjct: 65 RTKSVRCAACGHGEAVFFQATTRGEDGMALFFVCCNPSCGHRWRD 109
>B6T3H5_MAIZE (tr|B6T3H5) DNA-directed RNA polymerase subunit OS=Zea mays PE=3
SV=1
Length = 114
Score = 167 bits (424), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 76/104 (73%), Positives = 91/104 (87%), Gaps = 1/104 (0%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NNILYPKED+ +R L +ACRNC+HQEV+DNN VYRNEV H+ E TQ+LQDVASDPTLPR
Sbjct: 11 NNILYPKEDRDRRTLFFACRNCEHQEVSDNNCVYRNEVHHTAGERTQVLQDVASDPTLPR 70
Query: 61 TKSVRCSACGHGEAVFLQATSR-EEGFTLFYVCCNPNCGNRWRD 103
TK+VRC+ CGHGEAVF QA +R EEG TLF+VCC+P+CG+RWR+
Sbjct: 71 TKTVRCNLCGHGEAVFFQAAARGEEGMTLFFVCCSPDCGHRWRE 114
>Q10T38_ORYSJ (tr|Q10T38) DNA-directed RNA polymerase subunit OS=Oryza sativa
subsp. japonica GN=Os03g0102200 PE=3 SV=1
Length = 114
Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 75/104 (72%), Positives = 91/104 (87%), Gaps = 1/104 (0%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NNILYPKE+K +R+LL+ACRNC+HQEV+++ VYRNEV H+ E TQ+LQDVASDPTLPR
Sbjct: 11 NNILYPKEEKDRRLLLFACRNCEHQEVSESKCVYRNEVAHAAGERTQVLQDVASDPTLPR 70
Query: 61 TKSVRCSACGHGEAVFLQATSR-EEGFTLFYVCCNPNCGNRWRD 103
TK+VRC+ACGHGEAVF QAT+R EEG TLF+VCCN C +RWR+
Sbjct: 71 TKTVRCAACGHGEAVFFQATARGEEGMTLFFVCCNLTCAHRWRE 114
>B8AL10_ORYSI (tr|B8AL10) DNA-directed RNA polymerase subunit OS=Oryza sativa
subsp. indica GN=OsI_09622 PE=3 SV=1
Length = 114
Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 75/104 (72%), Positives = 91/104 (87%), Gaps = 1/104 (0%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NNILYPKE+K +R+LL+ACRNC+HQEV+++ VYRNEV H+ E TQ+LQDVASDPTLPR
Sbjct: 11 NNILYPKEEKDRRLLLFACRNCEHQEVSESKCVYRNEVAHAAGERTQVLQDVASDPTLPR 70
Query: 61 TKSVRCSACGHGEAVFLQATSR-EEGFTLFYVCCNPNCGNRWRD 103
TK+VRC+ACGHGEAVF QAT+R EEG TLF+VCCN C +RWR+
Sbjct: 71 TKTVRCAACGHGEAVFFQATARGEEGMTLFFVCCNLTCAHRWRE 114
>Q10T39_ORYSJ (tr|Q10T39) DNA-directed RNA polymerase subunit OS=Oryza sativa
subsp. japonica GN=LOC_Os03g01230 PE=3 SV=1
Length = 136
Score = 153 bits (386), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 75/126 (59%), Positives = 91/126 (72%), Gaps = 23/126 (18%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQ----------------------EVADNNRVYRNEV 38
NNILYPKE+K +R+LL+ACRNC+HQ EV+++ VYRNEV
Sbjct: 11 NNILYPKEEKDRRLLLFACRNCEHQVHTLIISIRLWRRRNLKKQQQQEVSESKCVYRNEV 70
Query: 39 QHSVTEFTQILQDVASDPTLPRTKSVRCSACGHGEAVFLQATSR-EEGFTLFYVCCNPNC 97
H+ E TQ+LQDVASDPTLPRTK+VRC+ACGHGEAVF QAT+R EEG TLF+VCCN C
Sbjct: 71 AHAAGERTQVLQDVASDPTLPRTKTVRCAACGHGEAVFFQATARGEEGMTLFFVCCNLTC 130
Query: 98 GNRWRD 103
+RWR+
Sbjct: 131 AHRWRE 136
>C3XRA2_BRAFL (tr|C3XRA2) DNA-directed RNA polymerase subunit OS=Branchiostoma
floridae GN=BRAFLDRAFT_278052 PE=3 SV=1
Length = 125
Score = 137 bits (346), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 63/105 (60%), Positives = 80/105 (76%), Gaps = 2/105 (1%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYPKEDK+ +ILLYACRNCD+Q+VADN+ +Y N++ H V E TQI+ DVA DPTLPR
Sbjct: 21 NNMLYPKEDKENKILLYACRNCDYQQVADNSCIYVNKIMHEVDELTQIVADVAQDPTLPR 80
Query: 61 TKSVRCSACGHGEAVFLQA--TSREEGFTLFYVCCNPNCGNRWRD 103
T+ +C CGH EAVF Q+ T E+ L+YVC PNCG+RW +
Sbjct: 81 TEDHQCPKCGHREAVFFQSQTTKAEDAMRLYYVCTAPNCGHRWTE 125
>Q5EAU6_XENLA (tr|Q5EAU6) DNA-directed RNA polymerase subunit OS=Xenopus laevis
GN=polr2i PE=2 SV=1
Length = 125
Score = 134 bits (336), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 61/105 (58%), Positives = 79/105 (75%), Gaps = 2/105 (1%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYPKEDK+ RILLYACRNCD+Q+ ADN+ +Y N++ H + E TQI+ DVA +PTLPR
Sbjct: 21 NNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEIDELTQIIADVAQEPTLPR 80
Query: 61 TKSVRCSACGHGEAVFLQATS--REEGFTLFYVCCNPNCGNRWRD 103
T+ CS CGH EAVF Q+ S E+ L+YVC P+CG+RW +
Sbjct: 81 TEDHPCSKCGHKEAVFFQSHSAKSEDAMRLYYVCTAPHCGHRWTE 125
>Q1LVK2_DANRE (tr|Q1LVK2) DNA-directed RNA polymerase subunit OS=Danio rerio
GN=polr2i PE=2 SV=1
Length = 126
Score = 133 bits (335), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 78/105 (74%), Gaps = 2/105 (1%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYPKEDK+ RILLYACRNCD+Q+ ADN+ +Y N++ H V E TQI+ DVA DPTLPR
Sbjct: 22 NNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADVAQDPTLPR 81
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCGNRWRD 103
T+ C CGH EAVF Q+ S E+ L+YVC P+CG+RW +
Sbjct: 82 TEDHPCPKCGHKEAVFFQSHSMKAEDAMRLYYVCTAPHCGHRWTE 126
>Q55GG8_DICDI (tr|Q55GG8) DNA-directed RNA polymerase subunit OS=Dictyostelium
discoideum GN=rpb9 PE=3 SV=1
Length = 112
Score = 133 bits (335), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 62/101 (61%), Positives = 74/101 (73%), Gaps = 2/101 (1%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYPK DK + LL ACR CDH+E A NN VYRNE++HSV E TQI QD+ASDPTLPR
Sbjct: 8 NNMLYPKADKANKTLLLACRICDHKEEATNNCVYRNEIRHSVMEKTQISQDIASDPTLPR 67
Query: 61 TKSVRCSACGHGEAVFLQATSREEGFTLFYVCCNPNCGNRW 101
TK+ +C +CG EA F Q+ + G TLFYVC +CG RW
Sbjct: 68 TKAAKCPSCGGREAAFFQSMTAANGMTLFYVC--ASCGERW 106
>B7PRG9_IXOSC (tr|B7PRG9) DNA-directed RNA polymerase subunit OS=Ixodes
scapularis GN=IscW_ISCW007621 PE=3 SV=1
Length = 129
Score = 133 bits (334), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 63/103 (61%), Positives = 76/103 (73%), Gaps = 2/103 (1%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYPKEDK+ R+LLYACRNCD+Q+VADNN +Y N++ H V E TQI+ DV DPTLPR
Sbjct: 25 NNMLYPKEDKENRVLLYACRNCDYQQVADNNCIYVNKITHEVDELTQIVSDVVHDPTLPR 84
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCGNRW 101
T+ C C H EAVF QA SR E+ L+YVC N NC +RW
Sbjct: 85 TEDHTCPKCSHREAVFFQAQSRRAEDEMRLYYVCTNTNCTHRW 127
>Q4S925_TETNG (tr|Q4S925) DNA-directed RNA polymerase subunit (Fragment)
OS=Tetraodon nigroviridis GN=GSTENG00022088001 PE=3 SV=1
Length = 126
Score = 132 bits (333), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 61/105 (58%), Positives = 78/105 (74%), Gaps = 2/105 (1%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYPKEDK+ RILLYACRNCD+Q+ ADN+ +Y N++ H V E TQI+ DV+ DPTLPR
Sbjct: 22 NNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADVSQDPTLPR 81
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCGNRWRD 103
T+ C CGH EAVF Q+ S E+ L+YVC P+CG+RW +
Sbjct: 82 TEDHPCPKCGHKEAVFFQSHSMKAEDAMRLYYVCTAPHCGHRWTE 126
>C1BGM4_ONCMY (tr|C1BGM4) DNA-directed RNA polymerase subunit OS=Oncorhynchus
mykiss GN=RPB9 PE=2 SV=1
Length = 126
Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/105 (58%), Positives = 78/105 (74%), Gaps = 2/105 (1%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYPKEDK+ RILLYACRNCD+Q+ ADN+ +Y N++ H V E TQI+ DV+ DPTLPR
Sbjct: 22 NNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADVSQDPTLPR 81
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCGNRWRD 103
T+ C CGH EAVF Q+ S E+ L+YVC P+CG+RW +
Sbjct: 82 TEDHPCPKCGHKEAVFFQSHSMKAEDAMRLYYVCTAPHCGHRWTE 126
>B5FX75_TAEGU (tr|B5FX75) DNA-directed RNA polymerase subunit OS=Taeniopygia
guttata PE=2 SV=1
Length = 125
Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/105 (58%), Positives = 78/105 (74%), Gaps = 2/105 (1%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYPKEDK+ RILLYACRNCD+Q+ ADN+ +Y N++ H V E TQI+ DV+ DPTLPR
Sbjct: 21 NNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADVSQDPTLPR 80
Query: 61 TKSVRCSACGHGEAVFLQATS--REEGFTLFYVCCNPNCGNRWRD 103
T+ C CGH EAVF Q+ S E+ L+YVC P+CG+RW +
Sbjct: 81 TEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRWTE 125
>D4A531_RAT (tr|D4A531) DNA-directed RNA polymerase subunit OS=Rattus
norvegicus GN=Polr2i PE=3 SV=1
Length = 125
Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/105 (58%), Positives = 78/105 (74%), Gaps = 2/105 (1%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYPKEDK+ RILLYACRNCD+Q+ ADN+ +Y N++ H V E TQI+ DV+ DPTLPR
Sbjct: 21 NNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADVSQDPTLPR 80
Query: 61 TKSVRCSACGHGEAVFLQATS--REEGFTLFYVCCNPNCGNRWRD 103
T+ C CGH EAVF Q+ S E+ L+YVC P+CG+RW +
Sbjct: 81 TEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRWTE 125
>D2HFU4_AILME (tr|D2HFU4) DNA-directed RNA polymerase subunit (Fragment)
OS=Ailuropoda melanoleuca GN=PANDA_009792 PE=3 SV=1
Length = 125
Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/105 (58%), Positives = 78/105 (74%), Gaps = 2/105 (1%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYPKEDK+ RILLYACRNCD+Q+ ADN+ +Y N++ H V E TQI+ DV+ DPTLPR
Sbjct: 21 NNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADVSQDPTLPR 80
Query: 61 TKSVRCSACGHGEAVFLQATS--REEGFTLFYVCCNPNCGNRWRD 103
T+ C CGH EAVF Q+ S E+ L+YVC P+CG+RW +
Sbjct: 81 TEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRWTE 125
>Q5XJ93_DANRE (tr|Q5XJ93) DNA-directed RNA polymerase subunit OS=Danio rerio
GN=polr2i PE=2 SV=1
Length = 126
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/105 (58%), Positives = 78/105 (74%), Gaps = 2/105 (1%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYPKEDK+ RILLYACRNCD+Q+ ADN+ ++ N++ H V E TQI+ DVA DPTLPR
Sbjct: 22 NNMLYPKEDKENRILLYACRNCDYQQEADNSCIHVNKITHEVDELTQIIADVAQDPTLPR 81
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCGNRWRD 103
T+ C CGH EAVF Q+ S E+ L+YVC P+CG+RW +
Sbjct: 82 TEDHPCPKCGHKEAVFFQSHSMKAEDAMRLYYVCTAPHCGHRWTE 126
>C1BH34_ONCMY (tr|C1BH34) DNA-directed RNA polymerase subunit OS=Oncorhynchus
mykiss GN=RPB9 PE=2 SV=1
Length = 126
Score = 130 bits (328), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 77/103 (74%), Gaps = 2/103 (1%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYPKEDK+ RILLYACRNCD+Q+ ADN+ +Y N++ H V E TQI+ DV+ DPTLPR
Sbjct: 22 NNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADVSQDPTLPR 81
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCGNRW 101
T+ C CGH +AVF Q+ S E+ L+YVC P+CG+RW
Sbjct: 82 TEDHPCPKCGHKKAVFFQSHSMKAEDAMRLYYVCTAPHCGHRW 124
>C4WT20_ACYPI (tr|C4WT20) DNA-directed RNA polymerase subunit OS=Acyrthosiphon
pisum GN=ACYPI001520 PE=2 SV=1
Length = 130
Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 77/103 (74%), Gaps = 2/103 (1%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYPKEDK+ ++LLYACRNCDH+++AD+N +Y N++ H + E T I+ DV SDPTLPR
Sbjct: 23 NNMLYPKEDKEHKVLLYACRNCDHRQMADSNCIYVNKIMHEINELTHIVSDVTSDPTLPR 82
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCGNRW 101
++ C C H E+VF QA +R EE L+YVC NP+C +RW
Sbjct: 83 SEDHPCPKCKHRESVFFQAQTRRAEEEMRLYYVCTNPHCIHRW 125
>D3YYI3_MOUSE (tr|D3YYI3) DNA-directed RNA polymerase subunit OS=Mus musculus
GN=Polr2i PE=3 SV=1
Length = 103
Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/101 (58%), Positives = 75/101 (74%), Gaps = 2/101 (1%)
Query: 3 ILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPRTK 62
+LYPKEDK+ RILLYACRNCD+Q+ ADN+ +Y N++ H V E TQI+ DV+ DPTLPRT+
Sbjct: 1 MLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADVSQDPTLPRTE 60
Query: 63 SVRCSACGHGEAVFLQATS--REEGFTLFYVCCNPNCGNRW 101
C CGH EAVF Q+ S E+ L+YVC P+CG+RW
Sbjct: 61 DHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRW 101
>B0W4J8_CULQU (tr|B0W4J8) DNA-directed RNA polymerase subunit OS=Culex
quinquefasciatus GN=CpipJ_CPIJ001855 PE=3 SV=1
Length = 127
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 76/103 (73%), Gaps = 2/103 (1%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYPKEDK+ ++LLYACRNCD+++ AD+N +Y N++ H + E T I+ DV SDPTLPR
Sbjct: 23 NNMLYPKEDKENKVLLYACRNCDYKQEADSNCIYVNKIMHEIDELTHIVPDVISDPTLPR 82
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCGNRW 101
T+ C C H EAVF QA +R EE L+YVC NPNC +RW
Sbjct: 83 TEEHACPKCAHREAVFFQAQTRRAEEEMRLYYVCTNPNCCHRW 125
>Q8GSD5_ORYSJ (tr|Q8GSD5) Putative RNA Polymerase II subunit 14.5 kD OS=Oryza
sativa subsp. japonica GN=P0616D06.132 PE=4 SV=1
Length = 116
Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 55/104 (52%), Positives = 78/104 (75%), Gaps = 1/104 (0%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
+N+LYP+EDK+ LLYAC +C+HQE A + VY+ ++ E IL+D A+DPTLPR
Sbjct: 13 SNMLYPREDKETHTLLYACNSCEHQEPATDTCVYKRVLRKPAGEPKDILKDAATDPTLPR 72
Query: 61 TKSVRCSACGHGEAVFLQATSR-EEGFTLFYVCCNPNCGNRWRD 103
T+S++C CGH EA F QA ++ E+G TL+++CCNP+CG+RWRD
Sbjct: 73 TRSIKCYNCGHPEAAFFQAPTKGEKGLTLYFICCNPSCGHRWRD 116
>B7FNR6_DROME (tr|B7FNR6) DNA-directed RNA polymerase subunit (Fragment)
OS=Drosophila melanogaster GN=RpII15-RA PE=2 SV=1
Length = 136
Score = 127 bits (319), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 76/105 (72%), Gaps = 2/105 (1%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYPKEDK+ +ILLYACRNCD+++ AD+N +Y N++ H + E T I+ DV SDPTLPR
Sbjct: 32 NNMLYPKEDKENKILLYACRNCDYKQEADSNCIYVNKIMHEIDELTHIVPDVISDPTLPR 91
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCGNRWRD 103
T+ C C H EAVF QA +R EE L+YVC N NC +RW +
Sbjct: 92 TEDHACPKCSHREAVFFQAQTRRAEEEMRLYYVCTNQNCTHRWTE 136
>B4QZW6_DROSI (tr|B4QZW6) DNA-directed RNA polymerase subunit OS=Drosophila
simulans GN=GD18953 PE=3 SV=1
Length = 129
Score = 127 bits (318), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 76/105 (72%), Gaps = 2/105 (1%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYPKEDK+ +ILLYACRNCD+++ AD+N +Y N++ H + E T I+ DV SDPTLPR
Sbjct: 25 NNMLYPKEDKENKILLYACRNCDYKQEADSNCIYVNKIMHEIDELTHIVPDVISDPTLPR 84
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCGNRWRD 103
T+ C C H EAVF QA +R EE L+YVC N NC +RW +
Sbjct: 85 TEDHACPKCSHREAVFFQAQTRRAEEEMRLYYVCTNQNCTHRWTE 129
>B4PT93_DROYA (tr|B4PT93) DNA-directed RNA polymerase subunit OS=Drosophila
yakuba GN=GE24228 PE=3 SV=1
Length = 129
Score = 127 bits (318), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 76/105 (72%), Gaps = 2/105 (1%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYPKEDK+ +ILLYACRNCD+++ AD+N +Y N++ H + E T I+ DV SDPTLPR
Sbjct: 25 NNMLYPKEDKENKILLYACRNCDYKQEADSNCIYVNKIMHEIDELTHIVPDVISDPTLPR 84
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCGNRWRD 103
T+ C C H EAVF QA +R EE L+YVC N NC +RW +
Sbjct: 85 TEDHACPKCSHREAVFFQAQTRRAEEEMRLYYVCTNQNCTHRWTE 129
>B4HEP4_DROSE (tr|B4HEP4) DNA-directed RNA polymerase subunit OS=Drosophila
sechellia GN=GM24158 PE=3 SV=1
Length = 129
Score = 127 bits (318), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 76/105 (72%), Gaps = 2/105 (1%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYPKEDK+ +ILLYACRNCD+++ AD+N +Y N++ H + E T I+ DV SDPTLPR
Sbjct: 25 NNMLYPKEDKENKILLYACRNCDYKQEADSNCIYVNKIMHEIDELTHIVPDVISDPTLPR 84
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCGNRWRD 103
T+ C C H EAVF QA +R EE L+YVC N NC +RW +
Sbjct: 85 TEDHACPKCSHREAVFFQAQTRRAEEEMRLYYVCTNQNCTHRWTE 129
>B3P0P5_DROER (tr|B3P0P5) DNA-directed RNA polymerase subunit OS=Drosophila
erecta GN=GG16847 PE=3 SV=1
Length = 129
Score = 127 bits (318), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 76/105 (72%), Gaps = 2/105 (1%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYPKEDK+ +ILLYACRNCD+++ AD+N +Y N++ H + E T I+ DV SDPTLPR
Sbjct: 25 NNMLYPKEDKENKILLYACRNCDYKQEADSNCIYVNKIMHEIDELTHIVPDVISDPTLPR 84
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCGNRWRD 103
T+ C C H EAVF QA +R EE L+YVC N NC +RW +
Sbjct: 85 TEDHACPKCSHREAVFFQAQTRRAEEEMRLYYVCTNQNCTHRWTE 129
>B4NAN1_DROWI (tr|B4NAN1) DNA-directed RNA polymerase subunit OS=Drosophila
willistoni GN=GK11344 PE=3 SV=1
Length = 129
Score = 127 bits (318), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 76/105 (72%), Gaps = 2/105 (1%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYPKEDK+ +ILLYACRNCD+++ AD+N +Y N++ H + E T I+ DV SDPTLPR
Sbjct: 25 NNMLYPKEDKENKILLYACRNCDYKQEADSNCIYVNKIMHEIDELTHIVPDVISDPTLPR 84
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCGNRWRD 103
T+ C C H EAVF QA +R EE L+YVC N NC +RW +
Sbjct: 85 TEDHACPKCSHREAVFFQAQTRRAEEEMRLYYVCTNQNCTHRWTE 129
>Q299B2_DROPS (tr|Q299B2) DNA-directed RNA polymerase subunit OS=Drosophila
pseudoobscura pseudoobscura GN=GA17176 PE=3 SV=1
Length = 129
Score = 127 bits (318), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 76/105 (72%), Gaps = 2/105 (1%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYPKEDK+ +ILLYACRNCD+++ AD+N +Y N++ H + E T I+ DV SDPTLPR
Sbjct: 25 NNMLYPKEDKENKILLYACRNCDYKQEADSNCIYVNKIMHEIDELTHIVPDVISDPTLPR 84
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCGNRWRD 103
T+ C C H EAVF QA +R EE L+YVC N NC +RW +
Sbjct: 85 TEDHACPKCSHREAVFFQAQTRRAEEEMRLYYVCTNQNCTHRWTE 129
>B4G4Z3_DROPE (tr|B4G4Z3) DNA-directed RNA polymerase subunit OS=Drosophila
persimilis GN=GL23270 PE=3 SV=1
Length = 129
Score = 127 bits (318), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 76/105 (72%), Gaps = 2/105 (1%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYPKEDK+ +ILLYACRNCD+++ AD+N +Y N++ H + E T I+ DV SDPTLPR
Sbjct: 25 NNMLYPKEDKENKILLYACRNCDYKQEADSNCIYVNKIMHEIDELTHIVPDVISDPTLPR 84
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCGNRWRD 103
T+ C C H EAVF QA +R EE L+YVC N NC +RW +
Sbjct: 85 TEDHACPKCSHREAVFFQAQTRRAEEEMRLYYVCTNQNCTHRWTE 129
>B6UEU6_MAIZE (tr|B6UEU6) DNA-directed RNA polymerase II 14.5 kDa polypeptide
OS=Zea mays PE=4 SV=1
Length = 114
Score = 127 bits (318), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 78/104 (75%), Gaps = 1/104 (0%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYP+EDK+ R LLYAC+ C+H+E+A + VY+ ++ E +L+D A+DP+LPR
Sbjct: 11 NNMLYPREDKETRTLLYACQTCEHEEIATDTCVYKRVIRKPGGEPKDVLKDAATDPSLPR 70
Query: 61 TKSVRCSACGHGEAVFLQATSR-EEGFTLFYVCCNPNCGNRWRD 103
T+SVRC C H EA F QA ++ E+ TL+++CCNP+CG+RWRD
Sbjct: 71 TRSVRCYNCNHPEAAFFQAPTKGEQAMTLYFICCNPSCGHRWRD 114
>B3LZX4_DROAN (tr|B3LZX4) DNA-directed RNA polymerase subunit OS=Drosophila
ananassae GN=GF16163 PE=3 SV=1
Length = 129
Score = 126 bits (317), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 75/105 (71%), Gaps = 2/105 (1%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYPKEDK +ILLYACRNCD+++ AD+N +Y N++ H + E T I+ DV SDPTLPR
Sbjct: 25 NNMLYPKEDKDNKILLYACRNCDYKQEADSNCIYVNKIMHEIDELTHIVPDVISDPTLPR 84
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCGNRWRD 103
T+ C C H EAVF QA +R EE L+YVC N NC +RW +
Sbjct: 85 TEDHACPKCSHREAVFFQAQTRRAEEEMRLYYVCTNQNCTHRWTE 129
>D2A4H0_TRICA (tr|D2A4H0) DNA-directed RNA polymerase subunit OS=Tribolium
castaneum GN=GLEAN_15369 PE=3 SV=1
Length = 130
Score = 126 bits (316), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 74/103 (71%), Gaps = 2/103 (1%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYPKEDK+ +ILLYACRNCD+++ AD+ +Y N++ H + E T I+ DV SDPTLPR
Sbjct: 26 NNMLYPKEDKENKILLYACRNCDYKQHADSKCIYVNKIMHEIDELTHIVPDVISDPTLPR 85
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCGNRW 101
T+ C C H EAVF QA +R EE L+YVC NP C +RW
Sbjct: 86 TEDHHCPECNHREAVFFQAQTRRAEEEMRLYYVCTNPMCAHRW 128
>Q1HRD6_AEDAE (tr|Q1HRD6) DNA-directed RNA polymerase subunit OS=Aedes aegypti
GN=AAEL001831 PE=2 SV=1
Length = 128
Score = 126 bits (316), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 76/105 (72%), Gaps = 2/105 (1%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYPKEDK+ ++LLYACRNCD+++ AD+N +Y N++ H + E T I+ DV SDPTLPR
Sbjct: 24 NNMLYPKEDKENKVLLYACRNCDYKQEADSNCIYVNKIMHEIDELTHIVPDVISDPTLPR 83
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCGNRWRD 103
T+ C C H EAVF QA +R EE L+YVC NP C +RW +
Sbjct: 84 TEEHACPKCTHREAVFFQAQTRRAEEEMRLYYVCTNPGCCHRWTE 128
>A7SXH3_NEMVE (tr|A7SXH3) DNA-directed RNA polymerase subunit OS=Nematostella
vectensis GN=v1g247948 PE=3 SV=1
Length = 129
Score = 126 bits (316), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 78/104 (75%), Gaps = 1/104 (0%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYPKEDK +ILLYACRNCD+Q+ ADN+ +Y N++ H V E TQI+ DV +DPTLPR
Sbjct: 26 NNMLYPKEDKDHKILLYACRNCDYQQEADNSCIYVNKITHEVNELTQIVGDVIADPTLPR 85
Query: 61 TKSVRCSACGHGEAVFLQA-TSREEGFTLFYVCCNPNCGNRWRD 103
T+ C CGH E+VF Q+ +S+ + L+YVC + +CG++W +
Sbjct: 86 TEDHECPRCGHRESVFFQSQSSKADQMVLYYVCTSVDCGHKWTE 129
>B4MBD3_DROVI (tr|B4MBD3) DNA-directed RNA polymerase subunit OS=Drosophila
virilis GN=GJ14413 PE=3 SV=1
Length = 129
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 75/105 (71%), Gaps = 2/105 (1%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYPKEDK +IL+YACRNCD+++ AD+N +Y N++ H + E T I+ DV SDPTLPR
Sbjct: 25 NNMLYPKEDKDNKILMYACRNCDYKQEADSNCIYVNKIMHEIDELTHIVPDVISDPTLPR 84
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCGNRWRD 103
T+ C C H EAVF QA +R EE L+YVC N NC +RW +
Sbjct: 85 TEDHACPKCSHREAVFFQAQTRRAEEEMRLYYVCTNQNCTHRWTE 129
>B6U7D6_MAIZE (tr|B6U7D6) DNA-directed RNA polymerase II 14.5 kDa polypeptide
OS=Zea mays PE=4 SV=1
Length = 114
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 77/104 (74%), Gaps = 1/104 (0%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYP+EDK+ R LLYAC+ C+H+E+A + VY+ ++ E +L+D A+DP+LPR
Sbjct: 11 NNMLYPREDKETRTLLYACQTCEHEEIATDTCVYKRVIRKPGGEPKDVLKDAATDPSLPR 70
Query: 61 TKSVRCSACGHGEAVFLQATSR-EEGFTLFYVCCNPNCGNRWRD 103
T+SVRC C H EA F QA ++ E+ TL+++CCNP CG+RWRD
Sbjct: 71 TRSVRCYNCNHPEAAFFQAPTKGEQAMTLYFICCNPICGHRWRD 114
>Q7Q4H0_ANOGA (tr|Q7Q4H0) DNA-directed RNA polymerase subunit (Fragment)
OS=Anopheles gambiae GN=AGAP008393 PE=3 SV=2
Length = 128
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 76/105 (72%), Gaps = 2/105 (1%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYPKEDK+ +ILLYACRNCD+++ AD+N +Y N++ H + E T I+ DV SDPTLPR
Sbjct: 24 NNMLYPKEDKENKILLYACRNCDYKQEADSNCIYVNKIMHEIDELTHIVPDVISDPTLPR 83
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCGNRWRD 103
T+ C C H EAVF QA +R EE L+YVC N +C +RW +
Sbjct: 84 TEEHACPKCSHREAVFFQAQTRRAEEEMRLYYVCTNSSCCHRWTE 128
>A8QDP3_BRUMA (tr|A8QDP3) DNA-directed RNA polymerase subunit OS=Brugia malayi
GN=Bm1_52995 PE=3 SV=1
Length = 121
Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 74/105 (70%), Gaps = 2/105 (1%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYPKEDK+ R LLYACRNCDH+++++N +Y N++ H V E TQI+ DV DPTLP+
Sbjct: 17 NNMLYPKEDKENRQLLYACRNCDHKQLSENPCIYVNKLMHEVDELTQIVADVVHDPTLPK 76
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCGNRWRD 103
T+ C C EAVF QA SR EE L+YVC NP C +RW D
Sbjct: 77 TEDHPCPMCRGREAVFFQAQSRRAEEEMRLYYVCMNPTCAHRWTD 121
>B4JS70_DROGR (tr|B4JS70) DNA-directed RNA polymerase subunit OS=Drosophila
grimshawi GN=GH18685 PE=3 SV=1
Length = 129
Score = 123 bits (309), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 74/105 (70%), Gaps = 2/105 (1%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYPKEDK + L+YACRNCD+++ AD+N +Y N++ H + E T I+ DV SDPTLPR
Sbjct: 25 NNMLYPKEDKDNKTLMYACRNCDYKQEADSNCIYVNKIMHEIDELTHIVPDVISDPTLPR 84
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCGNRWRD 103
T+ C C H EAVF QA +R EE L+YVC N NC +RW +
Sbjct: 85 TEDHACPKCSHREAVFFQAQTRRAEEEMRLYYVCTNQNCTHRWTE 129
>B6U3L3_MAIZE (tr|B6U3L3) DNA-directed RNA polymerase II 14.5 kDa polypeptide
OS=Zea mays PE=4 SV=1
Length = 118
Score = 123 bits (309), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 76/108 (70%), Gaps = 5/108 (4%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYP+EDK+ R LLYAC+ C+H+E+A + VY+ ++ E +L+D A+DP+LPR
Sbjct: 11 NNMLYPREDKETRTLLYACQTCEHEEIATDTCVYKRVIRKPGGEPKDVLKDAATDPSLPR 70
Query: 61 TKSVRCSACGHGEAVFLQA-----TSREEGFTLFYVCCNPNCGNRWRD 103
T+SVRC C H EA F Q T E+ TL+++CCNP+CG+RWRD
Sbjct: 71 TRSVRCYNCXHPEAAFFQVCTQAPTKGEQAMTLYFICCNPSCGHRWRD 118
>C1BNL8_9MAXI (tr|C1BNL8) DNA-directed RNA polymerase subunit OS=Caligus
rogercresseyi GN=RPB9 PE=2 SV=1
Length = 127
Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 74/105 (70%), Gaps = 2/105 (1%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYPKEDK+ + L+YACRNCD++++ADNN +Y N++ H V E T I+ DV DPTLPR
Sbjct: 23 NNMLYPKEDKENKALMYACRNCDYKQLADNNCIYVNKIMHEVDEVTNIVSDVIGDPTLPR 82
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCGNRWRD 103
++ C C H EAVF Q+ SR ++ L+YVC P C +RW +
Sbjct: 83 SEDHPCPKCKHKEAVFFQSESRKADDEMRLYYVCTYPQCAHRWTE 127
>B4KC63_DROMO (tr|B4KC63) DNA-directed RNA polymerase subunit OS=Drosophila
mojavensis GN=GI10814 PE=3 SV=1
Length = 103
Score = 120 bits (302), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 71/101 (70%), Gaps = 2/101 (1%)
Query: 3 ILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPRTK 62
+LYPKEDK + L+YACRNCD+++ AD+N +Y N++ H + E T I+ DV SDPTLPRT+
Sbjct: 1 MLYPKEDKDNKTLMYACRNCDYKQEADSNCIYVNKIMHEIDELTHIVPDVISDPTLPRTE 60
Query: 63 SVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCGNRW 101
C C H EAVF QA +R EE L+YVC N NC +RW
Sbjct: 61 DHACPKCSHREAVFFQAQTRRAEEEMRLYYVCTNQNCTHRW 101
>Q0D4N8_ORYSJ (tr|Q0D4N8) Os07g0615800 protein OS=Oryza sativa subsp. japonica
GN=Os07g0615800 PE=4 SV=1
Length = 117
Score = 117 bits (294), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 51/100 (51%), Positives = 74/100 (74%), Gaps = 1/100 (1%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
+N+LYP+EDK+ LLYAC +C+HQE A + VY+ ++ E IL+D A+DPTLPR
Sbjct: 13 SNMLYPREDKETHTLLYACNSCEHQEPATDTCVYKRVLRKPAGEPKDILKDAATDPTLPR 72
Query: 61 TKSVRCSACGHGEAVFLQATSR-EEGFTLFYVCCNPNCGN 99
T+S++C CGH EA F QA ++ E+G TL+++CCNP+CG+
Sbjct: 73 TRSIKCYNCGHPEAAFFQAPTKGEKGLTLYFICCNPSCGH 112
>Q965S0_CAEEL (tr|Q965S0) DNA-directed RNA polymerase subunit OS=Caenorhabditis
elegans GN=rpb-9 PE=2 SV=1
Length = 167
Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 76/105 (72%), Gaps = 2/105 (1%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYP+EDK+ R+L+Y+CRNC+H+EVA N +Y N++ H + E TQI+ D+ DPTLP+
Sbjct: 63 NNMLYPREDKESRVLMYSCRNCEHREVAANPCIYVNKLVHEIDELTQIVGDIIHDPTLPK 122
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCGNRWRD 103
T+ +C CG +AVF QA ++ EE L+YVC + +C +RW +
Sbjct: 123 TEEHQCPVCGKSKAVFFQAQTKKAEEEMRLYYVCASQDCQHRWTE 167
>Q6QAQ8_PIG (tr|Q6QAQ8) DNA-directed RNA polymerase subunit (Fragment) OS=Sus
scrofa PE=2 SV=1
Length = 105
Score = 113 bits (283), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 70/103 (67%), Gaps = 2/103 (1%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYPKEDK+ RILL RNCD+Q+ DN+ +Y N++ V E TQI+ DV+ DPTLPR
Sbjct: 1 NNMLYPKEDKENRILLSVSRNCDYQQEGDNSCIYVNKITPEVGELTQIIADVSQDPTLPR 60
Query: 61 TKSVRCSACGHGEAVFLQATS--REEGFTLFYVCCNPNCGNRW 101
+ C GH EAVF Q+ S E+ L+YVC P+CG+RW
Sbjct: 61 NEDHPCQKRGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRW 103
>B3RJJ7_TRIAD (tr|B3RJJ7) DNA-directed RNA polymerase subunit OS=Trichoplax
adhaerens GN=TRIADDRAFT_19600 PE=3 SV=1
Length = 129
Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 70/105 (66%), Gaps = 2/105 (1%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYPKEDK+ ++L Y CRNC++ +A+N +Y N++ H + E TQI+ DV +DPTLPR
Sbjct: 25 NNMLYPKEDKENKVLRYMCRNCEYSRIAENPCIYVNKITHEINELTQIIADVVADPTLPR 84
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCGNRWRD 103
T+ C C EAVF QA S E+ L+YVC CG+RW +
Sbjct: 85 TREHACPKCMEREAVFFQAQSTLAEDNMKLYYVCSVQGCGHRWTE 129
>D3BKZ5_POLPA (tr|D3BKZ5) RNA polymerase II core subunit OS=Polysphondylium
pallidum PN500 GN=rpb9 PE=4 SV=1
Length = 110
Score = 110 bits (276), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 66/92 (71%), Gaps = 1/92 (1%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYP DK R LL +C+ CDHQE A NN VYRNE++HS+ E TQI D+ASDPTLPR
Sbjct: 8 NNLLYPIADKVNRELLLSCKICDHQEKASNNCVYRNEIKHSIEERTQISHDIASDPTLPR 67
Query: 61 TKSVRCSACGHGEAVFLQATS-REEGFTLFYV 91
TK +C ACG EA+F Q+ + + TLF++
Sbjct: 68 TKGSKCPACGGREAIFFQSMGQKSDKMTLFFI 99
>C1FE61_9CHLO (tr|C1FE61) DNA-directed RNA polymerase subunit OS=Micromonas sp.
RCC299 GN=MICPUN_51672 PE=3 SV=1
Length = 124
Score = 109 bits (273), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 72/103 (69%), Gaps = 3/103 (2%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
N++LYPKED+ ++ L+YACRNC+++ A ++ VYR+ + H+ E T I+QDV SDPTLPR
Sbjct: 20 NDLLYPKEDRDRKKLIYACRNCEYKVDAIDHCVYRHSIHHTSAETTTIIQDVRSDPTLPR 79
Query: 61 TKSVRCSACGHGEAVFLQATSREEGFTLFYVCCNPNCGNRWRD 103
+ V C +C HGEAVF T+ EG +LF+ C C +W+D
Sbjct: 80 SSEVHCPSCDHGEAVFFSLTT-SEGMSLFFQCV--ACAGKWKD 119
>A4RSQ4_OSTLU (tr|A4RSQ4) DNA-directed RNA polymerase subunit OS=Ostreococcus
lucimarinus (strain CCE9901) GN=Rpb9 PE=3 SV=1
Length = 124
Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 70/103 (67%), Gaps = 3/103 (2%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
N++LYPKED+ + L+Y CRNCD+ A N V+R + HS +E T ++ DV +DPTLPR
Sbjct: 20 NDLLYPKEDRVNKKLVYFCRNCDYTIAATENCVHRRTIFHSASEITAVIHDVRTDPTLPR 79
Query: 61 TKSVRCSACGHGEAVFLQATSREEGFTLFYVCCNPNCGNRWRD 103
+K V+CS C EAVF T+ EG +LF+ C NCGN+W+D
Sbjct: 80 SKDVQCSLCDAREAVFFSQTT-TEGMSLFFQCI--NCGNKWKD 119
>D3Z3Z8_MOUSE (tr|D3Z3Z8) Putative uncharacterized protein Polr2i OS=Mus
musculus GN=Polr2i PE=4 SV=1
Length = 83
Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/79 (62%), Positives = 61/79 (77%)
Query: 3 ILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPRTK 62
+LYPKEDK+ RILLYACRNCD+Q+ ADN+ +Y N++ H V E TQI+ DV+ DPTLPRT+
Sbjct: 1 MLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADVSQDPTLPRTE 60
Query: 63 SVRCSACGHGEAVFLQATS 81
C CGH EAVF Q+ S
Sbjct: 61 DHPCQKCGHKEAVFFQSHS 79
>Q5DAX2_SCHJA (tr|Q5DAX2) DNA-directed RNA polymerase subunit OS=Schistosoma
japonicum PE=2 SV=1
Length = 126
Score = 107 bits (266), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 68/105 (64%), Gaps = 2/105 (1%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYPKEDK+ + L YACRNCD+ + ADN VY N+++ V E I+ DV DPTLPR
Sbjct: 22 NNMLYPKEDKRTKTLFYACRNCDYSQEADNPCVYINKLEQEVDELALIVPDVVHDPTLPR 81
Query: 61 TKSVRCSACGHGEAVFLQATS--REEGFTLFYVCCNPNCGNRWRD 103
T+ C CG EAVF Q+ + EE L+YVC N C ++W +
Sbjct: 82 TEDHICRRCGKQEAVFFQSQTLKAEENMRLYYVCTNVECLHKWTE 126
>C1LZL1_SCHMA (tr|C1LZL1) DNA-directed RNA polymerase subunit OS=Schistosoma
mansoni GN=Smp_067090 PE=3 SV=1
Length = 126
Score = 106 bits (264), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 68/105 (64%), Gaps = 2/105 (1%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYPKEDK+ + L YACRNCD+ + ADN VY N+++ V E I+ DV DPTLPR
Sbjct: 22 NNMLYPKEDKRTKTLYYACRNCDYSQEADNPCVYINKLEQEVDELALIVPDVVHDPTLPR 81
Query: 61 TKSVRCSACGHGEAVFLQATS--REEGFTLFYVCCNPNCGNRWRD 103
T+ C CG EAVF Q+ + EE L+YVC N C ++W +
Sbjct: 82 TEDHICRRCGKQEAVFFQSQTLKAEENMRLYYVCTNVECLHKWTE 126
>A8XD45_CAEBR (tr|A8XD45) DNA-directed RNA polymerase subunit OS=Caenorhabditis
briggsae GN=cbr-rpb-9 PE=3 SV=1
Length = 144
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 71/105 (67%), Gaps = 4/105 (3%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYP+EDK+ R+L+Y+CRNC+H+EVA N +Y N++ H + E TQI+ D+ DPTLP+
Sbjct: 42 NNMLYPREDKESRVLMYSCRNCEHREVAANPCIYVNKLVHEIDELTQIVADIIHDPTLPK 101
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCGNRWRD 103
T+ C C +AVF QA ++ EE L+YVC C RW +
Sbjct: 102 TEEHSCPKCTKRKAVFFQAQTKKAEEEMRLYYVCM--YCQFRWTE 144
>C1MJZ9_MICPS (tr|C1MJZ9) Predicted protein OS=Micromonas pusilla CCMP1545
GN=MICPUCDRAFT_64136 PE=4 SV=1
Length = 154
Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 67/102 (65%), Gaps = 1/102 (0%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
N++LYPKED+ + L+YACRNCD Q AD++ V+R+ V H+ E T ++QDV +DPTLPR
Sbjct: 32 NDLLYPKEDRALKKLIYACRNCDFQVEADDHCVFRHLVHHTAAETTTVIQDVRTDPTLPR 91
Query: 61 TKSVRCSACGHGEAVFLQATSREEGFTLFYVCCNPNCGNRWR 102
+ VRCS C + +AVF T+ EG +LF+ R R
Sbjct: 92 SSHVRCSRCENADAVFFSLTT-SEGMSLFFSVSLVGTNGRMR 132
>D7M9S4_ARALY (tr|D7M9S4) Putative uncharacterized protein OS=Arabidopsis lyrata
subsp. lyrata GN=ARALYDRAFT_915072 PE=4 SV=1
Length = 84
Score = 100 bits (250), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 64/104 (61%), Gaps = 29/104 (27%)
Query: 8 EDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPRTKSVRCS 67
EDK+Q ILLYACRNCDHQE ADNN VYRNEV HS +V C+
Sbjct: 2 EDKEQSILLYACRNCDHQEAADNNCVYRNEVHHS---------------------TVLCT 40
Query: 68 ACGHGEAVFLQ-------ATSR-EEGFTLFYVCCNPNCGNRWRD 103
C HGEAVF Q AT++ EEG TLF+VC NPNC +RWR+
Sbjct: 41 KCQHGEAVFFQVNHYLKEATAKGEEGMTLFFVCYNPNCSHRWRE 84
>A3LYD6_PICST (tr|A3LYD6) DNA-directed RNA polymerase subunit OS=Pichia stipitis
GN=RPB9 PE=3 SV=1
Length = 112
Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 66/96 (68%), Gaps = 3/96 (3%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYPKEDK + LLYACRNC + E+A+N +VYR+E+ ++ E ++QD+ SDPTLPR
Sbjct: 11 NNMLYPKEDKDGQRLLYACRNCGYTELAENPKVYRHELITNIGETAGVVQDIGSDPTLPR 70
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCN 94
+ C+ CG+ E VF Q+ R + LFYVC N
Sbjct: 71 SDK-ECTKCGNKECVFFQSQQRRKDTSMILFYVCLN 105
>Q6BK95_DEBHA (tr|Q6BK95) DNA-directed RNA polymerase subunit OS=Debaryomyces
hansenii GN=DEHA2F23760g PE=3 SV=1
Length = 112
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 66/94 (70%), Gaps = 3/94 (3%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYPKEDK LLY+CRNCD+ E+A+N +VYR+E+ ++ E ++QD+ SDPTLPR
Sbjct: 11 NNMLYPKEDKDNARLLYSCRNCDYTELAENPKVYRHELITNIGETAGVVQDIGSDPTLPR 70
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVC 92
+ S C CG+ ++VF Q+ R + LFYVC
Sbjct: 71 S-SKECPDCGNKDSVFFQSQQRRKDTSMILFYVC 103
>B6JXI0_SCHJY (tr|B6JXI0) DNA-directed RNA polymerase subunit
OS=Schizosaccharomyces japonicus (strain yFS275 /
FY16936) GN=SJAG_00119 PE=3 SV=1
Length = 112
Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/105 (50%), Positives = 66/105 (62%), Gaps = 5/105 (4%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYP+EDK R L ACRNCD+ EVA + VYR+E+ +S E + QDVASDPTLPR
Sbjct: 11 NNMLYPREDKVNRTLRLACRNCDYSEVAAGSMVYRHELMNSTGETAGVTQDVASDPTLPR 70
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCGNRWRD 103
T+ C C E VF Q+ SR + TLF+VC CG + D
Sbjct: 71 TEK-ECKRCHQSECVFFQSQSRRADTKMTLFFVC--AYCGFIFED 112
>B4FHU6_MAIZE (tr|B4FHU6) Putative uncharacterized protein OS=Zea mays PE=2 SV=1
Length = 155
Score = 96.3 bits (238), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 45/54 (83%), Positives = 47/54 (87%)
Query: 25 QEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPRTKSVRCSACGHGEAVFLQ 78
QEVADNN VYRN V HS EFTQ+LQDVA DPTLPRTKSVRCS+CGHGEAVF Q
Sbjct: 87 QEVADNNCVYRNVVHHSAGEFTQVLQDVAGDPTLPRTKSVRCSSCGHGEAVFFQ 140
>Q59Z24_CANAL (tr|Q59Z24) DNA-directed RNA polymerase subunit OS=Candida albicans
GN=RPB9 PE=3 SV=1
Length = 112
Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 3/96 (3%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYPKEDK+ + LLYACRNC + E+A+N +VYR+E+ ++ +++D+ +DPTLPR
Sbjct: 11 NNMLYPKEDKEGQRLLYACRNCGYTELAENPKVYRHELMTNIGATAGVVEDIGNDPTLPR 70
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCN 94
+ C CGH E VF Q+ R + LF+VC N
Sbjct: 71 SDK-ECPDCGHHECVFFQSQQRRKDTSMILFFVCLN 105
>C4YCH6_CLAL4 (tr|C4YCH6) DNA-directed RNA polymerase subunit OS=Clavispora
lusitaniae (strain ATCC 42720) GN=CLUG_05815 PE=3 SV=1
Length = 112
Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 65/94 (69%), Gaps = 3/94 (3%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYP+EDK LLY+CRNCD+ E+A+N +VYR+E+ ++ E ++QD+ SDPTLPR
Sbjct: 11 NNMLYPREDKDNARLLYSCRNCDYTELAENPKVYRHELITNIGETAGVVQDIGSDPTLPR 70
Query: 61 TKSVRCSACGHGEAVFLQATS--REEGFTLFYVC 92
+ + C CG+ + VF Q+ ++ LFYVC
Sbjct: 71 SNKI-CPHCGNHDCVFFQSQQKRKDTSMILFYVC 103
>C4QY79_PICPG (tr|C4QY79) DNA-directed RNA polymerase subunit OS=Pichia pastoris
(strain GS115) GN=PAS_chr1-4_0359 PE=3 SV=1
Length = 113
Score = 94.4 bits (233), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 68/105 (64%), Gaps = 5/105 (4%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYPKEDK+ + LLY+CRNCD+ E+A++ +VYR+E+ ++ E I+ D+ DPTLPR
Sbjct: 9 NNMLYPKEDKENQRLLYSCRNCDYTELAEDPKVYRHELITNIGETAGIVDDIGQDPTLPR 68
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCGNRWRD 103
+ C C + VF Q+ R + TLFYVC NC +RD
Sbjct: 69 SDK-ECPECHSRDCVFFQSQQRRKDTNMTLFYVCL--NCKKTFRD 110
>B9WC06_CANDC (tr|B9WC06) DNA-directed RNA polymerase subunit OS=Candida
dubliniensis (strain CD36 / CBS 7987 / NCPF 3949 / NRRL
Y-17841) GN=CD36_21470 PE=3 SV=1
Length = 112
Score = 94.0 bits (232), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 3/96 (3%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYPKEDK+ + LLYACRNC + E+A+N +VYR+E+ ++ +++D+ +DPTLPR
Sbjct: 11 NNMLYPKEDKEGQRLLYACRNCGYTELAENPKVYRHELITNIGATAGVVEDIGNDPTLPR 70
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCN 94
+ C CGH E VF Q+ R + LF+VC N
Sbjct: 71 SDK-ECPDCGHHECVFFQSQQRRKDTSMILFFVCLN 105
>A5DAZ0_PICGU (tr|A5DAZ0) DNA-directed RNA polymerase subunit OS=Pichia
guilliermondii GN=PGUG_00445 PE=3 SV=1
Length = 112
Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 64/94 (68%), Gaps = 3/94 (3%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYP+EDK+ LLY+CRNCD+ E+A+N +VYR+E+ ++ E ++QD+ +DPTLPR
Sbjct: 11 NNMLYPREDKENSRLLYSCRNCDYTELAENPKVYRHELMTNIGETAGVVQDIGNDPTLPR 70
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVC 92
+ C C + + VF Q+ R + LFYVC
Sbjct: 71 SDK-ECPRCSNKDCVFFQSQQRRKDTSMILFYVC 103
>C5M7A5_CANTT (tr|C5M7A5) DNA-directed RNA polymerase subunit OS=Candida
tropicalis (strain ATCC MYA-3404 / T1) GN=CTRG_01737
PE=3 SV=1
Length = 112
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 64/94 (68%), Gaps = 3/94 (3%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYPKEDK+ + LLYACRNC + E+A+N +VYR+E+ ++ ++QD+ +DPTLPR
Sbjct: 11 NNMLYPKEDKEGQRLLYACRNCGYTELAENPKVYRHELITNIGATAGVVQDIGNDPTLPR 70
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVC 92
+ C CG+ E VF Q+ R + LF+VC
Sbjct: 71 SNK-ECPECGNHECVFFQSQQRRKDTSMILFFVC 103
>B6Q946_PENMQ (tr|B6Q946) DNA-directed RNA polymerase subunit OS=Penicillium
marneffei (strain ATCC 18224 / CBS 334.59 / QM 7333)
GN=PMAA_070860 PE=3 SV=1
Length = 129
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 63/103 (61%), Gaps = 5/103 (4%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
+N+LYPKED+ Q L++ CR C E A + VY+N + V E + QDV SDPTLPR
Sbjct: 29 SNLLYPKEDRVQNRLMFTCRTCHVSEPATSPCVYQNNLNTQVGETAGVTQDVGSDPTLPR 88
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCGNRW 101
+ + C +CG EAVF Q+ R E G L+YVCC CGN +
Sbjct: 89 SNKL-CPSCGENEAVFFQSQQRSAETGMKLYYVCC--TCGNVF 128
>C6H4I7_AJECH (tr|C6H4I7) DNA-directed RNA polymerase subunit OS=Ajellomyces
capsulata (strain H143) GN=HCDG_01426 PE=3 SV=1
Length = 129
Score = 90.5 bits (223), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 64/103 (62%), Gaps = 5/103 (4%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
+N+LYPKED+ L++ CR C E A + VY+N++ + V + + QDV SDPTLPR
Sbjct: 29 SNLLYPKEDRNTNTLMFTCRTCHVGEPASSPCVYQNKLNNQVGDTAGVTQDVGSDPTLPR 88
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCGNRW 101
+ + C +CG EAVF Q+ R E G L+YVCC CGN +
Sbjct: 89 SNKL-CPSCGENEAVFFQSQQRSAETGMKLYYVCC--TCGNVF 128
>C0NM38_AJECG (tr|C0NM38) DNA-directed RNA polymerase subunit OS=Ajellomyces
capsulata (strain ATCC 26029 / G186AR / H82 / RMSCC
2432) GN=HCBG_04568 PE=3 SV=1
Length = 129
Score = 90.5 bits (223), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 64/103 (62%), Gaps = 5/103 (4%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
+N+LYPKED+ L++ CR C E A + VY+N++ + V + + QDV SDPTLPR
Sbjct: 29 SNLLYPKEDRNTNTLMFTCRTCHVGEPASSPCVYQNKLNNQVGDTAGVTQDVGSDPTLPR 88
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCGNRW 101
+ + C +CG EAVF Q+ R E G L+YVCC CGN +
Sbjct: 89 SNKL-CPSCGENEAVFFQSQQRSAETGMKLYYVCC--TCGNVF 128
>C5XE10_SORBI (tr|C5XE10) Putative uncharacterized protein Sb02g039195 (Fragment)
OS=Sorghum bicolor GN=Sb02g039195 PE=4 SV=1
Length = 72
Score = 89.7 bits (221), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
Query: 33 VYRNEVQHSVTEFTQILQDVASDPTLPRTKSVRCSACGHGEAVFLQA-TSREEGFTLFYV 91
VY+ ++ V E +L+D A+DP+LPRT+SVRC C H EA F QA TS E+ TL+++
Sbjct: 1 VYKRVIRKPVGEPKDVLKDAATDPSLPRTRSVRCYNCNHPEAAFFQAPTSGEQAMTLYFI 60
Query: 92 CCNPNCGNRWRD 103
CCNP+CG+RWRD
Sbjct: 61 CCNPSCGHRWRD 72
>C5PHU6_COCP7 (tr|C5PHU6) DNA-directed RNA polymerase subunit OS=Coccidioides
posadasii (strain C735) GN=CPC735_054690 PE=3 SV=1
Length = 129
Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
+N+LYPKED+ L+++CR C E A ++ VY+N++ V + + QDV SDPTLPR
Sbjct: 29 SNLLYPKEDRATNTLMFSCRTCHVGEPATSHCVYQNKLNSQVGDTAGVTQDVGSDPTLPR 88
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCC 93
+ + C +CG EAVF Q+ R E G L+YVCC
Sbjct: 89 SNRL-CPSCGENEAVFFQSQQRSAETGMKLYYVCC 122
>B8NBS3_ASPFN (tr|B8NBS3) DNA-directed RNA polymerase subunit OS=Aspergillus
flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 /
JCM 12722 / SRRC 167) GN=AFLA_046480 PE=3 SV=1
Length = 128
Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 63/103 (61%), Gaps = 5/103 (4%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
+N+LYPKED+ L++ CR C E A + VY+N++ V + + QDV SDPTLPR
Sbjct: 28 SNLLYPKEDRVNNRLMFTCRTCHVGEPASSYCVYQNKLNSQVGDTAGVTQDVGSDPTLPR 87
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCGNRW 101
+ + C +CG EAVF Q+ R E G L+YVCC CGN +
Sbjct: 88 SNKL-CPSCGEAEAVFFQSQQRSAETGMKLYYVCC--ACGNVF 127
>A2QZ75_ASPNC (tr|A2QZ75) Contig An12c0110, complete genome. OS=Aspergillus niger
(strain CBS 513.88 / FGSC A1513) GN=An12g03900 PE=4 SV=1
Length = 119
Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 63/103 (61%), Gaps = 5/103 (4%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
+N+LYPKED+ L++ CR C E A + VY+N++ V + + QDV SDPTLPR
Sbjct: 19 SNLLYPKEDRINNRLMFTCRTCHVGEPATSYCVYQNKLNTQVGDTAGVTQDVGSDPTLPR 78
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCGNRW 101
+ + C +CG EAVF Q+ R E G L+YVCC CGN +
Sbjct: 79 SNKL-CPSCGEAEAVFFQSQQRSAETGMKLYYVCC--ACGNVF 118
>C9SDJ5_VERA1 (tr|C9SDJ5) DNA-directed RNA polymerase subunit OS=Verticillium
albo-atrum (strain VaMs.102) GN=VDBG_02525 PE=3 SV=1
Length = 132
Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 64/104 (61%), Gaps = 5/104 (4%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
+N+LYPK+D L + CR C + E A ++ V+RN + ++ E + QDV SDPTLPR
Sbjct: 29 SNMLYPKQDDNSHRLQFTCRTCHYTEEAQSSCVFRNVMNNAAGETAGVTQDVGSDPTLPR 88
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCGNRWR 102
+ + C +C H EAVF Q+ R E G LFYVCC CG+ ++
Sbjct: 89 -EIISCPSCSHNEAVFFQSQQRSAETGMKLFYVCC--ECGHIFQ 129
>C7Z7Z8_NECH7 (tr|C7Z7Z8) DNA-directed RNA polymerase subunit OS=Nectria
haematococca (strain 77-13-4 / FGSC 9596 / MPVI)
GN=NECHADRAFT_68831 PE=3 SV=1
Length = 131
Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 60/103 (58%), Gaps = 5/103 (4%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
+N+LYPKED L + CR C + E A + V+RN + S E + QDV SDPTLPR
Sbjct: 31 SNMLYPKEDVDSHKLQFTCRTCQYTEDAQSTCVFRNVLNTSAGETAGVTQDVGSDPTLPR 90
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCGNRW 101
+ C +C H EAVF Q+ R E G LFYVCC CG+ +
Sbjct: 91 SNKT-CPSCKHEEAVFFQSQQRSAETGMKLFYVCC--ECGHIF 130
>C1GD69_PARBD (tr|C1GD69) DNA-directed RNA polymerase subunit OS=Paracoccidioides
brasiliensis (strain Pb18) GN=PADG_05205 PE=3 SV=1
Length = 128
Score = 87.4 bits (215), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 62/103 (60%), Gaps = 5/103 (4%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
+N+LYPKED+ L+Y CR C E A + V++N++ V + + QDV SDPTLPR
Sbjct: 28 SNLLYPKEDRASNKLMYTCRTCHVGEPATSPCVFQNKLNTQVGDTAGVTQDVGSDPTLPR 87
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCGNRW 101
+ + C +CG EAVF Q+ R E G L+YVCC CG +
Sbjct: 88 SNKL-CPSCGENEAVFFQSQQRSAETGMKLYYVCC--TCGKVF 127
>C0SHR0_PARBP (tr|C0SHR0) DNA-directed RNA polymerase subunit OS=Paracoccidioides
brasiliensis (strain Pb03) GN=PABG_07240 PE=3 SV=1
Length = 128
Score = 87.4 bits (215), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 62/103 (60%), Gaps = 5/103 (4%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
+N+LYPKED+ L+Y CR C E A + V++N++ V + + QDV SDPTLPR
Sbjct: 28 SNLLYPKEDRASNKLMYTCRTCHVGEPATSPCVFQNKLNTQVGDTAGVTQDVGSDPTLPR 87
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCGNRW 101
+ + C +CG EAVF Q+ R E G L+YVCC CG +
Sbjct: 88 SNKL-CPSCGENEAVFFQSQQRSAETGMKLYYVCC--TCGKVF 127
>A5DYL7_LODEL (tr|A5DYL7) DNA-directed RNA polymerase subunit OS=Lodderomyces
elongisporus GN=LELG_02454 PE=3 SV=1
Length = 112
Score = 86.7 bits (213), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 62/94 (65%), Gaps = 3/94 (3%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYPKEDK + LLY CRNC + E+AD+++VYR+E+ ++ +++D+ +DPTLPR
Sbjct: 11 NNMLYPKEDKDGQRLLYGCRNCGYNEIADDSKVYRHELMTNIGATAGVVEDIGNDPTLPR 70
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVC 92
+ C C + + VF Q+ R + LF+VC
Sbjct: 71 SNK-ECPQCYNRDCVFFQSQQRRKDTSMILFFVC 103
>Q4X1W6_ASPFU (tr|Q4X1W6) DNA-directed RNA polymerase subunit OS=Aspergillus
fumigatus GN=AFUA_2G08540 PE=3 SV=1
Length = 128
Score = 86.7 bits (213), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 62/103 (60%), Gaps = 5/103 (4%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
+N+LYPKED+ L++ CR C E A + VY+N++ V + + QDV SDPTLPR
Sbjct: 28 SNLLYPKEDRVNNRLMFTCRTCHVGEPATSYCVYQNKLNSQVGDTAGVTQDVGSDPTLPR 87
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCGNRW 101
+ C +CG EAVF Q+ R E G L+YVCC CGN +
Sbjct: 88 SNK-PCPSCGEAEAVFFQSQQRSAETGMKLYYVCC--ACGNVF 127
>B6H263_PENCW (tr|B6H263) DNA-directed RNA polymerase subunit OS=Penicillium
chrysogenum (strain ATCC 28089 / DSM 1075 / Wisconsin
54-1255) GN=Pc13g04110 PE=3 SV=1
Length = 128
Score = 86.7 bits (213), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 61/103 (59%), Gaps = 5/103 (4%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
+N+LYPKED+ L++ CR C E A ++ VY+N + V + + QDV SDPTLPR
Sbjct: 28 SNLLYPKEDRVNNQLMFTCRTCHVGEPASSHCVYQNHLHSQVGDTAGVTQDVTSDPTLPR 87
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCGNRW 101
+ C +CG EAVF Q+ R E G L+YVCC CG +
Sbjct: 88 ANKL-CPSCGETEAVFFQSQQRSAETGMKLYYVCC--ACGQVY 127
>B8BUI2_THAPS (tr|B8BUI2) Predicted protein OS=Thalassiosira pseudonana
GN=THAPSDRAFT_39536 PE=4 SV=1
Length = 112
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 64/105 (60%), Gaps = 6/105 (5%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQD-VASDPTLP 59
+++LYPKE++ +R LLYACR C + E A +Y+N ++ V + V+ DPTLP
Sbjct: 8 SSMLYPKENRNERKLLYACRLCRYTEYAPGQLIYQNILKKEVGNVLHTVPSAVSDDPTLP 67
Query: 60 RTKSVRCSACGHGEAVFLQATS---REEGFTLFYVCCNPNCGNRW 101
R+++ C CGH EAVF Q+ + R + L +VCC NC ++W
Sbjct: 68 RSQNAHCDKCGHNEAVFFQSDTSDVRNDTLALIFVCC--NCDHKW 110
>B2WH54_PYRTR (tr|B2WH54) DNA-directed RNA polymerase subunit OS=Pyrenophora
tritici-repentis (strain Pt-1C-BFP) GN=PTRG_09313 PE=3
SV=1
Length = 137
Score = 84.0 bits (206), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 63/104 (60%), Gaps = 5/104 (4%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
+N+L+P+EDK + LL+ACR C E A ++ V R+E+ +V + +VA DPTLPR
Sbjct: 27 SNLLFPREDKSENKLLFACRTCSFTEEAPSSCVMRHEIASTVGATAGVTAEVAQDPTLPR 86
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCGNRWR 102
+ +C+ CG EAVF Q+ R E G L++VC CG+ R
Sbjct: 87 IQK-QCTECGENEAVFFQSQQRTAETGMALYFVCA--GCGHVSR 127
>A8IJY1_CHLRE (tr|A8IJY1) DNA-directed RNA polymerase subunit OS=Chlamydomonas
reinhardtii GN=RPB9 PE=3 SV=1
Length = 118
Score = 83.2 bits (204), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 64/105 (60%), Gaps = 5/105 (4%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNR--VYRNEVQHSVTEFTQILQDVASDPTL 58
N++LYP+EDK++R+L Y C+ C++ AD + VY + + L DV +DPTL
Sbjct: 15 NDLLYPREDKERRVLEYYCKTCNYCVQADPSEWCVYVHATVVDEKDKITTLYDVTADPTL 74
Query: 59 PRTKSVRCSACGHGEAVFLQATSREEGFTLFYVCCNPNCGNRWRD 103
PRT+ VRC C H EAVF+ + E+G TL++ C C +WRD
Sbjct: 75 PRTRDVRCPKCNHNEAVFVSEPT-EQGMTLYFHCV--ACREKWRD 116
>D5GJJ3_9PEZI (tr|D5GJJ3) DNA-directed RNA polymerase subunit OS=Tuber
melanosporum GN=GSTUM_00009040001 PE=3 SV=1
Length = 126
Score = 83.2 bits (204), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 56/100 (56%), Gaps = 5/100 (5%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
+N+LYP ED+ L+Y CR C E A NN V+RN + S E + DV SDPTLPR
Sbjct: 27 SNMLYPHEDRINNTLMYRCRTCQATESASNNCVFRNTLGGSTGETAGVTTDVGSDPTLPR 86
Query: 61 TKSVRCSACGHGEAVFLQATSREE--GFTLFYVCCNPNCG 98
+ C CG E VF Q+ R E LF+VCC +CG
Sbjct: 87 SMKP-CPKCGENECVFFQSQQRTEDTKMRLFHVCC--SCG 123
>B7FQG9_PHATR (tr|B7FQG9) Predicted protein OS=Phaeodactylum tricornutum CCAP
1055/1 GN=PHATRDRAFT_24922 PE=4 SV=1
Length = 111
Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 64/104 (61%), Gaps = 5/104 (4%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVA-DNNRVYRNEVQHSVTEFTQ-ILQDVASDPTL 58
+++LYP+EDK+ +IL YACR C + E A D +YRNE + V + ++ DPTL
Sbjct: 8 SSMLYPQEDKRNKILQYACRLCRYVESAPDQPLIYRNERKKEVGNILHTVPSSISDDPTL 67
Query: 59 PRTKSVRCSACGHGEAVFLQA-TSREEGFTLFYVCCNPNCGNRW 101
R++ C+ CG EAVF Q+ ++ + L +VCC NCG++W
Sbjct: 68 ARSQKANCANCGRHEAVFFQSDVAQSDSLALIFVCC--NCGHKW 109
>Q6CS79_KLULA (tr|Q6CS79) DNA-directed RNA polymerase subunit OS=Kluyveromyces
lactis GN=KLLA0D03234g PE=3 SV=1
Length = 122
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYP+EDK+ LL+ CR C + E A VYR+E++ ++ E ++QD+ SDPTLPR
Sbjct: 11 NNMLYPREDKETHKLLFECRTCPYVEEAGTPLVYRHELKTNIGETAGVVQDIGSDPTLPR 70
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVC 92
+ C C E VF Q+ R + LFYVC
Sbjct: 71 SDK-ECPKCHSRENVFFQSQQRRKDTSMVLFYVC 103
>B0D4Y9_LACBS (tr|B0D4Y9) DNA-directed RNA polymerase subunit OS=Laccaria bicolor
(strain S238N-H82) GN=LACBIDRAFT_184025 PE=3 SV=1
Length = 126
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYPK D+ +RI++YACR C + E+ +N VYRN++ E + D+ +DPTL
Sbjct: 11 NNLLYPKADQHRRIMVYACRICQYDEIGENKCVYRNDLLTVTKEQVGVTTDLGADPTLAH 70
Query: 61 TKSVRCSACGHGEAVFLQATS--REEGFTLFYVC 92
+ ++ C CGH +AVF Q S +E LF+VC
Sbjct: 71 S-NILCPRCGHEDAVFYQDQSKRKETRMLLFFVC 103
>Q4UDQ7_THEAN (tr|Q4UDQ7) DNA-directed RNA polymerase 2 subunit, putative
OS=Theileria annulata GN=TA11880 PE=4 SV=1
Length = 167
Score = 80.5 bits (197), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 56/105 (53%), Gaps = 7/105 (6%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVAD-----NNRVYRNEVQHSVTEFTQILQDVASD 55
NNILY K D +R L Y CR CD ++D +N +YR + + E + V D
Sbjct: 11 NNILYAKADILKRQLRYFCRQCDFSRISDSKSSEDNCIYRTDYNIAGKENIFVSPMVVKD 70
Query: 56 PTLPRTKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCG 98
PTL RT RC CGH +AVF Q R ++ L +VCCNP CG
Sbjct: 71 PTLGRTTRWRCLKCGHQKAVFFQLPERVTDDAMMLVFVCCNPGCG 115
>Q4N5T6_THEPA (tr|Q4N5T6) DNA-directed RNA polymerase II subunit, putative
OS=Theileria parva GN=TP02_0205 PE=4 SV=1
Length = 167
Score = 80.1 bits (196), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 56/105 (53%), Gaps = 7/105 (6%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVAD-----NNRVYRNEVQHSVTEFTQILQDVASD 55
NNILY K D +R L Y CR CD ++D +N +YR + + E + V D
Sbjct: 11 NNILYAKADILKRQLRYFCRQCDFSRISDSKSSEDNCIYRTDYNIAGKENIFVSPMVVKD 70
Query: 56 PTLPRTKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCG 98
PTL RT RC CGH +AVF Q R ++ L +VCCNP CG
Sbjct: 71 PTLGRTTRWRCLKCGHQKAVFFQLPERVTDDAMMLVFVCCNPGCG 115
>B6Q947_PENMQ (tr|B6Q947) DNA-directed RNA polymerase subunit OS=Penicillium
marneffei (strain ATCC 18224 / CBS 334.59 / QM 7333)
GN=PMAA_070860 PE=3 SV=1
Length = 145
Score = 79.7 bits (195), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 55/91 (60%), Gaps = 3/91 (3%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
+N+LYPKED+ Q L++ CR C E A + VY+N + V E + QDV SDPTLPR
Sbjct: 29 SNLLYPKEDRVQNRLMFTCRTCHVSEPATSPCVYQNNLNTQVGETAGVTQDVGSDPTLPR 88
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLF 89
+ + C +CG EAVF Q+ R E G +F
Sbjct: 89 SNKL-CPSCGENEAVFFQSQQRSAETGMVIF 118
>A4R9M8_MAGGR (tr|A4R9M8) DNA-directed RNA polymerase subunit OS=Magnaporthe
grisea GN=MGG_07391 PE=3 SV=1
Length = 131
Score = 79.7 bits (195), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
+N+LYPKED++ R L + CR C + A N V+RNE+ S + I++ + DPTLPR
Sbjct: 30 SNMLYPKEDEETRTLQFTCRTCHYTTNASNTCVFRNELNSSASLHAGIIEGMGKDPTLPR 89
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVC 92
K C CG E VF QA R E G YVC
Sbjct: 90 AKKT-CQYCGFDEMVFFQAQQRTAETGMKQIYVC 122
>C5E010_ZYGRC (tr|C5E010) DNA-directed RNA polymerase subunit
OS=Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732
/ IFO 1130 / NBRC 1623 / NCYC 568) GN=ZYRO0G08800g PE=3
SV=1
Length = 122
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYP+ED + + LL+ CR C + E A N VYR+E+ ++ E ++QD+ SDPTLPR
Sbjct: 11 NNMLYPREDNENQRLLFECRTCSYVEEAGNPLVYRHELITNIGETAGVVQDIGSDPTLPR 70
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVC 92
+ C C E VF Q+ R + LF+VC
Sbjct: 71 SDR-ECPKCHSRENVFFQSQQRRKDTSMVLFFVC 103
>C5E2E3_LACTC (tr|C5E2E3) DNA-directed RNA polymerase subunit OS=Lachancea
thermotolerans (strain CBS 6340) GN=KLTH0H04224g PE=3
SV=1
Length = 122
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYP+EDK + LL+ CR C + E A VYR+E+ ++ E ++QD+ SDPTLPR
Sbjct: 11 NNMLYPREDKDNQRLLFECRTCTYAEEAGTPMVYRHELITNIGETAGVVQDIGSDPTLPR 70
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVC 92
+ C C E VF Q+ R + LF+VC
Sbjct: 71 SDR-ECPRCHSHENVFFQSQQRRSDTSMVLFFVC 103
>D6VU72_YEAST (tr|D6VU72) B12.6 OS=Saccharomyces cerevisiae S288c GN=RPB9 PE=4
SV=1
Length = 122
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYP+EDK+ LL+ CR C + E A + VYR+E+ ++ E ++QD+ SDPTLPR
Sbjct: 11 NNMLYPREDKENNRLLFECRTCSYVEEAGSPLVYRHELITNIGETAGVVQDIGSDPTLPR 70
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVC 92
+ C C E VF Q+ R + LF+VC
Sbjct: 71 SDR-ECPKCHSRENVFFQSQQRRKDTSMVLFFVC 103
>C8Z8H7_YEAS8 (tr|C8Z8H7) DNA-directed RNA polymerase subunit OS=Saccharomyces
cerevisiae (strain Lalvin EC1118 / Prise de mousse)
GN=EC1118_1G1_2201g PE=3 SV=1
Length = 122
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYP+EDK+ LL+ CR C + E A + VYR+E+ ++ E ++QD+ SDPTLPR
Sbjct: 11 NNMLYPREDKENNRLLFECRTCSYVEEAGSPLVYRHELITNIGETAGVVQDIGSDPTLPR 70
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVC 92
+ C C E VF Q+ R + LF+VC
Sbjct: 71 SDR-ECPKCHSRENVFFQSQQRRKDTSMVLFFVC 103
>C7GW42_YEAS2 (tr|C7GW42) DNA-directed RNA polymerase subunit OS=Saccharomyces
cerevisiae (strain JAY291) GN=RPB9 PE=3 SV=1
Length = 122
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYP+EDK+ LL+ CR C + E A + VYR+E+ ++ E ++QD+ SDPTLPR
Sbjct: 11 NNMLYPREDKENNRLLFECRTCSYVEEAGSPLVYRHELITNIGETAGVVQDIGSDPTLPR 70
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVC 92
+ C C E VF Q+ R + LF+VC
Sbjct: 71 SDR-ECPKCHSRENVFFQSQQRRKDTSMVLFFVC 103
>B3LHD8_YEAS1 (tr|B3LHD8) DNA-directed RNA polymerase subunit OS=Saccharomyces
cerevisiae (strain RM11-1a) GN=SCRG_01071 PE=3 SV=1
Length = 122
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYP+EDK+ LL+ CR C + E A + VYR+E+ ++ E ++QD+ SDPTLPR
Sbjct: 11 NNMLYPREDKENNRLLFECRTCSYVEEAGSPLVYRHELITNIGETAGVVQDIGSDPTLPR 70
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVC 92
+ C C E VF Q+ R + LF+VC
Sbjct: 71 SDR-ECPKCHSRENVFFQSQQRRKDTSMVLFFVC 103
>A6ZUA7_YEAS7 (tr|A6ZUA7) DNA-directed RNA polymerase subunit OS=Saccharomyces
cerevisiae (strain YJM789) GN=RPB9 PE=3 SV=1
Length = 122
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYP+EDK+ LL+ CR C + E A + VYR+E+ ++ E ++QD+ SDPTLPR
Sbjct: 11 NNMLYPREDKENNRLLFECRTCSYVEEAGSPLVYRHELITNIGETAGVVQDIGSDPTLPR 70
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVC 92
+ C C E VF Q+ R + LF+VC
Sbjct: 71 SDR-ECPKCHSRENVFFQSQQRRKDTSMVLFFVC 103
>A7TJ44_VANPO (tr|A7TJ44) DNA-directed RNA polymerase subunit OS=Vanderwaltozyma
polyspora (strain ATCC 22028 / DSM 70294)
GN=Kpol_1033p49 PE=3 SV=1
Length = 122
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYP+EDK+ LL+ CR C + E A ++ VYR+E+ ++ E ++QD+ SDPTLPR
Sbjct: 11 NNMLYPREDKENMRLLFECRTCSYVEEAGSSLVYRHELITNIGETAGVVQDIGSDPTLPR 70
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVC 92
+ C C + VF Q+ R + LF+VC
Sbjct: 71 SDR-ECPKCHTRDNVFFQSQQRRKDTSMVLFFVC 103
>A8NUD2_COPC7 (tr|A8NUD2) DNA-directed RNA polymerase subunit OS=Coprinopsis
cinerea (strain Okayama-7 / 130 / FGSC 9003)
GN=CC1G_07076 PE=3 SV=2
Length = 123
Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 62/105 (59%), Gaps = 5/105 (4%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NN+LYPK D ++ L YACR C ++EV +N VY++++ E + D+ SDPTL
Sbjct: 11 NNLLYPKGDNARQQLAYACRICSYEEVVENKCVYKDDLLTVTKEQVGVTTDLGSDPTLAH 70
Query: 61 TKSVRCSACGHGEAVFLQATS--REEGFTLFYVCCNPNCGNRWRD 103
+ ++ C CGH +AVF Q S +E LFYVC C + ++D
Sbjct: 71 S-NIPCPKCGHDDAVFYQDQSKRKETRMILFYVCV--KCNHTFQD 112
>A7AUU3_BABBO (tr|A7AUU3) DNA-directed RNA polymerase subunit OS=Babesia bovis
GN=BBOV_II007540 PE=3 SV=1
Length = 163
Score = 76.6 bits (187), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVAD-----NNRVYRNEVQHSVTEFTQILQDVASD 55
NNILY + D +R L++ CR CD+ AD +N + R + E I + D
Sbjct: 11 NNILYARPDLTRRQLVFICRQCDYSRWADPGSLLDNCINRTTYNYQTREDIIIPPLITKD 70
Query: 56 PTLPRTKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCG 98
PTL RT+ C CGH EA F Q R ++ L +VCCNP CG
Sbjct: 71 PTLGRTRQWDCPRCGHTEATFFQLPERAYDDAMVLVFVCCNPGCG 115
>B9HWY4_POPTR (tr|B9HWY4) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_566800 PE=4 SV=1
Length = 69
Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 52/90 (57%), Gaps = 27/90 (30%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
NNILYP+ED+ Q+ILLYACRN + E TQ+L VA+DPTLPR
Sbjct: 5 NNILYPREDRDQKILLYACRN--------------------LAEKTQVLH-VAADPTLPR 43
Query: 61 TKSVRCSACGHGEAVFLQATSREEGFTLFY 90
TK+ C+ C H EAVF Q + T+FY
Sbjct: 44 TKAATCTVCKHPEAVFFQVS------TIFY 67
>Q6C1C2_YARLI (tr|Q6C1C2) DNA-directed RNA polymerase subunit OS=Yarrowia
lipolytica GN=YALI0F17534g PE=3 SV=1
Length = 100
Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 59/102 (57%), Gaps = 5/102 (4%)
Query: 3 ILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPRTK 62
+LYP+EDK+ R LL+ACRNC + E A V+++++ ++ E + + +DPTLPR+
Sbjct: 1 MLYPREDKEDRKLLFACRNCPYTEFASTPLVFKHQLITNIEETAGVTTGIGADPTLPRSD 60
Query: 63 SVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCGNRWR 102
C C + VF Q+ + E LF+VC NC N +R
Sbjct: 61 K-ECPKCHEHDVVFFQSQQKRAETTMILFFVC--NNCNNIFR 99
>B8BIJ1_ORYSI (tr|B8BIJ1) Putative uncharacterized protein OS=Oryza sativa
subsp. indica GN=OsI_37007 PE=4 SV=1
Length = 128
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 40/55 (72%), Gaps = 2/55 (3%)
Query: 44 EFTQILQDVASDPTLPRTKSVRCSACGHGEAVFLQ--ATSREEGFTLFYVCCNPN 96
+FTQ+LQDVA DPTLPRTKSVRC+ACGHGEAVF Q A SR T+ + P
Sbjct: 29 DFTQVLQDVAGDPTLPRTKSVRCAACGHGEAVFFQEVAGSRATARTITWCTTPPG 83
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 43/68 (63%), Gaps = 8/68 (11%)
Query: 19 CRNCDH------QEVADNNRVYRNEVQHSVT--EFTQILQDVASDPTLPRTKSVRCSACG 70
C C H QEVA + R + +FTQ+LQDVA DPTLPRTKSVRC+ACG
Sbjct: 51 CAACGHGEAVFFQEVAGSRATARTITWCTTPPGDFTQVLQDVAGDPTLPRTKSVRCAACG 110
Query: 71 HGEAVFLQ 78
HGEAVF Q
Sbjct: 111 HGEAVFFQ 118
>B6AGF8_CRYMR (tr|B6AGF8) DNA-directed RNA polymerase subunit OS=Cryptosporidium
muris (strain RN66) GN=CMU_001700 PE=3 SV=1
Length = 156
Score = 70.1 bits (170), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 52/105 (49%), Gaps = 9/105 (8%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEV-----QHSVTEFTQILQDVASD 55
NNIL P+E+ + R L Y CRNCD+ AD N V Q+ E + + + D
Sbjct: 12 NNILCPRENTEMRRLFYICRNCDYYNFADPGNPEENVVNCLMYQYEGKEDILVTKGLHQD 71
Query: 56 PTLPRTKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCG 98
PTL RT C CGH AVF Q R E TL +VC NCG
Sbjct: 72 PTLGRTDEWNCRGCGHNVAVFFQLPERVCSESMTLVFVCV--NCG 114
>Q5CUQ6_CRYPV (tr|Q5CUQ6) DNA-directed RNA polymerase 2 subunit
OS=Cryptosporidium parvum Iowa II GN=cgd3_1870 PE=4 SV=1
Length = 167
Score = 69.7 bits (169), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEV-----QHSVTEFTQILQDVASD 55
NNIL PKE+ ++R LLYACRNC++ AD N V Q+ E + + + D
Sbjct: 12 NNILCPKENIERRKLLYACRNCEYFSYADPTNAEENVVNCITYQYEGKEDILVARGLHQD 71
Query: 56 PTLPRTKSVRCSACGHGEAVFLQATSR--EEGFTLFYVC 92
PTL RT C CGH AVF Q R E TL +VC
Sbjct: 72 PTLGRTLEWNCRGCGHNVAVFFQLPERVCSEAMTLVFVC 110
>Q5CPB7_CRYHO (tr|Q5CPB7) DNA-directed RNA polymerase 2 subunit
OS=Cryptosporidium hominis GN=Chro.30221 PE=4 SV=1
Length = 167
Score = 69.7 bits (169), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEV-----QHSVTEFTQILQDVASD 55
NNIL PKE+ ++R LLYACRNC++ AD N V Q+ E + + + D
Sbjct: 12 NNILCPKENIERRKLLYACRNCEYFSYADPTNAEENVVNCITYQYEGKEDILVARGLHQD 71
Query: 56 PTLPRTKSVRCSACGHGEAVFLQATSR--EEGFTLFYVC 92
PTL RT C CGH AVF Q R E TL +VC
Sbjct: 72 PTLGRTLEWNCRGCGHNVAVFFQLPERVCSEAMTLVFVC 110
>Q55M04_CRYNE (tr|Q55M04) DNA-directed RNA polymerase subunit OS=Cryptococcus
neoformans GN=CNBI2080 PE=3 SV=1
Length = 123
Score = 69.7 bits (169), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 60/110 (54%), Gaps = 10/110 (9%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNR-----VYRNEVQHSVTEFTQILQDVASD 55
NN+LYPK D ++LLY CRNC++ E A VY++++ E +D+ +D
Sbjct: 11 NNLLYPKSDNNAKVLLYQCRNCNYTENATVEPGMAGCVYKHDLLTVAREQPGETKDLDTD 70
Query: 56 PTLPRTKSVRCSACGHGEAVFLQATSRE--EGFTLFYVCCNPNCGNRWRD 103
PTL R+ ++ C AC H AVF Q R TLFY C NC + +RD
Sbjct: 71 PTLQRS-AIECPACHHHGAVFFQDQGRRITTNMTLFYYC--TNCKHLFRD 117
>B6KIX4_TOXGO (tr|B6KIX4) DNA-directed RNA polymerase II subunit, putative
OS=Toxoplasma gondii ME49 GN=TGME49_002690 PE=4 SV=1
Length = 335
Score = 68.9 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/105 (37%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQ-----ILQDVASD 55
NN+LYP+EDK++R L + CR CD+ ++ V+ + F I D++ D
Sbjct: 13 NNMLYPREDKEKRQLQFLCRQCDYSRYPKKTDTAQHIVERTNFNFKSKEDIVISSDLSKD 72
Query: 56 PTLPRTKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCG 98
PTL R RC C VF Q R E+ TL YVC P CG
Sbjct: 73 PTLGRVFDWRCPRCRGVGGVFYQLPERVAEDAMTLVYVCTQPGCG 117
>D0N1Q1_PHYIN (tr|D0N1Q1) Putative uncharacterized protein OS=Phytophthora
infestans T30-4 GN=PITG_04645 PE=4 SV=1
Length = 115
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 8/106 (7%)
Query: 3 ILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNE-VQHSVTEFTQILQDVASDPTLPRT 61
+LYP +D++ R L++ CRNC E + N +Y NE V+ + + + DV DPTL R
Sbjct: 1 MLYPSQDREIRRLVFRCRNCGQCEDVEENCIYVNELVKDTRVQLDVLPGDVIDDPTLQRD 60
Query: 62 KSVRCSACGHGEAVFL--QATSREEGFTLFYVCCNPNC-----GNR 100
V C CGH AVF+ Q ++ L +VC N +C GNR
Sbjct: 61 YDVACPNCGHNGAVFIRSQDGVKQSTLALIWVCLNRDCQVDEEGNR 106
>B3KZH4_PLAKH (tr|B3KZH4) Dna-directed rna polymerase 2 subunit, putative
OS=Plasmodium knowlesi (strain H) GN=PKH_020320 PE=4
SV=1
Length = 248
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Query: 1 NNILYPKEDKKQRILLYACRNCD---HQEVADNNRVYRNEVQHSVTEFTQILQDVASDPT 57
NNILY + D+K + LLY CR+CD H+ N V R ++ E I + +DP
Sbjct: 11 NNILYARSDRKNKKLLYVCRSCDYISHKPNDQQNIVARINYNYNRKEDVYIHPETKNDPA 70
Query: 58 LPRTKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNC 97
L R + C +CG+ EAVFLQ R L YVC NC
Sbjct: 71 LGRVREWVCKSCGNNEAVFLQLPERISSNPMALIYVCTGKNC 112
>C5KKK6_9ALVE (tr|C5KKK6) DNA-directed RNA polymerase 2 subunit, putative
OS=Perkinsus marinus ATCC 50983 GN=Pmar_PMAR023444 PE=4
SV=1
Length = 129
Score = 66.6 bits (161), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 56/106 (52%), Gaps = 14/106 (13%)
Query: 1 NNILYPKEDKKQRILLYACRNCDH-QEV-----------ADNNRVYRNEVQHSVTEFTQI 48
NN+LYP+E+K++ L YACR C + Q V AD+ V+RN+V + E I
Sbjct: 12 NNLLYPRENKREVALEYACRTCPYVQRVVSKDDELENINADDLVVFRNDVSYHHKEALMI 71
Query: 49 LQDVASDPTLPRTKSVRCSACGHGEAVFLQATSREE--GFTLFYVC 92
DV DPTL RT C+ C + EAVF Q ++ L +VC
Sbjct: 72 RSDVIHDPTLSRTTEYTCNNCPNHEAVFWQLPESQQTNAMALIFVC 117
>Q8I241_PLAF7 (tr|Q8I241) DNA-directed RNA polymerase 2, putative OS=Plasmodium
falciparum (isolate 3D7) GN=PFA_0505c PE=4 SV=1
Length = 249
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVA---DNNRVYRNEVQHSVTEFTQILQDVASDPT 57
NNILY K D+K + L+Y CR+C++ + +NN V R + E I + +DP
Sbjct: 11 NNILYAKSDRKSKKLIYVCRSCEYISLKPNENNNIVARINYNYDRKEDIYIHPETKNDPA 70
Query: 58 LPRTKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNC 97
L R + C CG+ EAVFLQ + L YVC N +C
Sbjct: 71 LGRVRDWVCKQCGNNEAVFLQLAEKISYNPMALIYVCTNKHC 112
>Q4YUV5_PLABE (tr|Q4YUV5) DNA-directed RNA polymerase ii 15.1 kDa polypeptide,
putative OS=Plasmodium berghei GN=PB000852.02.0 PE=4
SV=1
Length = 226
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 5/102 (4%)
Query: 1 NNILYPKEDKKQRILLYACRNCDH---QEVADNNRVYRNEVQHSVTEFTQILQDVASDPT 57
NNILY + DKK + L+Y CR+CD+ ++ ++N V R ++ E I + +DP
Sbjct: 11 NNILYARSDKKNKKLIYVCRSCDYISNKQNENHNIVARINYNYNRKEDIYIHPETKNDPA 70
Query: 58 LPRTKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNC 97
L R + C C + EAVFLQ + L YVC N NC
Sbjct: 71 LGRVRDWVCKQCNNSEAVFLQLPEKISYNPMALIYVCTNKNC 112
>C5LSH6_9ALVE (tr|C5LSH6) DNA-directed RNA polymerase 2 subunit, putative
OS=Perkinsus marinus ATCC 50983 GN=Pmar_PMAR017075 PE=4
SV=1
Length = 129
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 55/106 (51%), Gaps = 14/106 (13%)
Query: 1 NNILYPKEDKKQRILLYACRNCDH-QEV-----------ADNNRVYRNEVQHSVTEFTQI 48
NN+LYP+E+K + L YACR C + Q V AD+ V+RN+V + E I
Sbjct: 12 NNLLYPRENKGEVALEYACRTCPYVQRVVSKDDELENINADDLVVFRNDVSYHHKEALMI 71
Query: 49 LQDVASDPTLPRTKSVRCSACGHGEAVFLQATSREE--GFTLFYVC 92
DV DPTL RT C+ C + EAVF Q ++ L +VC
Sbjct: 72 RSDVIHDPTLSRTTEYTCNNCPNHEAVFWQLPESQQTNAMALIFVC 117
>A5KDM5_PLAVI (tr|A5KDM5) DNA-directed RNA polymerase 2 subunit, putative,
truncated (Fragment) OS=Plasmodium vivax GN=PVX_136260
PE=4 SV=1
Length = 178
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Query: 1 NNILYPKEDKKQRILLYACRNCD---HQEVADNNRVYRNEVQHSVTEFTQILQDVASDPT 57
NNILY + D+K + LLY CR+C+ H+ N V R ++ E I + +DP
Sbjct: 11 NNILYARSDRKNKKLLYVCRSCEYISHKPNEQQNIVARINYNYNRKEDVYIHPETKNDPA 70
Query: 58 LPRTKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNC 97
L R + C CG+ EAVFLQ R L YVC NC
Sbjct: 71 LGRVREWICKNCGNNEAVFLQLPERITYNPMALIYVCTGKNC 112
>B9PUJ5_TOXGO (tr|B9PUJ5) DNA-directed RNA polymerase II subunit, putative
OS=Toxoplasma gondii GN=TGGT1_018280 PE=4 SV=1
Length = 321
Score = 64.7 bits (156), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/103 (35%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 3 ILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQ-----ILQDVASDPT 57
+LYP+EDK++R L + CR CD+ ++ V+ + F I D++ DPT
Sbjct: 1 MLYPREDKEKRQLQFLCRQCDYSRYPKKTDTAQHIVERTNFNFKSKEDIVISSDLSKDPT 60
Query: 58 LPRTKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCG 98
L R RC C VF Q R E+ TL YVC P CG
Sbjct: 61 LGRVFDWRCPRCRGVGGVFYQLPERVAEDAMTLVYVCTQPGCG 103
>C5KP35_9ALVE (tr|C5KP35) DNA-directed RNA polymerase ii 15.1 kDa polypeptide,
putative (Fragment) OS=Perkinsus marinus ATCC 50983
GN=Pmar_PMAR027079 PE=4 SV=1
Length = 115
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 50/90 (55%), Gaps = 12/90 (13%)
Query: 1 NNILYPKEDKKQRILLYACRNCDH-QEV-----------ADNNRVYRNEVQHSVTEFTQI 48
NN+LYP+E+K++ L YACR C + Q V AD+ V+RN+V + E I
Sbjct: 12 NNLLYPRENKREVALEYACRTCPYVQRVVSKDDELENINADDLVVFRNDVSYHHKEALMI 71
Query: 49 LQDVASDPTLPRTKSVRCSACGHGEAVFLQ 78
DV DPTL RT C+ C + EAVF Q
Sbjct: 72 RSDVIHDPTLSRTTEYTCNNCPNHEAVFWQ 101
>Q4X293_PLACH (tr|Q4X293) DNA-directed RNA polymerase 2 subunit, putative
(Fragment) OS=Plasmodium chabaudi GN=PC000089.04.0 PE=4
SV=1
Length = 92
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Query: 1 NNILYPKEDKKQRILLYACRNCDH---QEVADNNRVYRNEVQHSVTEFTQILQDVASDPT 57
NNILY + DKK + L+Y CR+CD+ Q+ +NN V R ++ E I + +DP
Sbjct: 11 NNILYARSDKKNKKLIYVCRSCDYISNQQNENNNIVARINYNYNRKEDVYIHPETKNDPA 70
Query: 58 LPRTKSVRCSACGHGEAVFLQ 78
L R + C CG+ EAVFLQ
Sbjct: 71 LGRVRDWICKQCGNTEAVFLQ 91
>Q4DHB0_TRYCR (tr|Q4DHB0) DNA-direcetd RNA polymerase II, subunit 9, putative
OS=Trypanosoma cruzi GN=Tc00.1047053511153.130 PE=4 SV=1
Length = 133
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 5/107 (4%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNR---VYRNEVQHSVTEFTQILQDVASDPT 57
NN+LYP+ D R + + C C EV D N+ + +++ TE ++L + A+DPT
Sbjct: 20 NNLLYPENDPLDRQMRWRCNYCRTTEVHDENKLVYILNLKLKTGTTEELELLAEFANDPT 79
Query: 58 LPRTKSVRCSACGHGEAV-FLQATSR-EEGFTLFYVCCNPNCGNRWR 102
R + RC CG + F+ + E TL++ C NP C + W+
Sbjct: 80 AQRDPTKRCRRCGENDVTCFVNPLGQPHEDMTLYFACANPKCRHVWK 126
>D2VT19_NAEGR (tr|D2VT19) Predicted protein OS=Naegleria gruberi
GN=NAEGRDRAFT_72143 PE=4 SV=1
Length = 134
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 64/114 (56%), Gaps = 13/114 (11%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQE--VADNNRVYRNEVQHSV-TEFTQI-LQDVASDP 56
NN+LYP+E+++ + L Y CR+CD E D VY+N+++ S +++ I ++ DP
Sbjct: 20 NNMLYPRENRRLKTLEYKCRHCDFSERVPTDEYTVYKNDIKASKDIQWSNIDWNELTKDP 79
Query: 57 TLPR-TKSV-RCSACGHGEAVFLQ-----ATSREEGFTLFYVCCNPNCGNRWRD 103
TLPR T + C CGH E V+LQ + G L+ +C C +R+++
Sbjct: 80 TLPRGTVGIGACPKCGHSEVVYLQTGFGITKENQGGMNLWLIC--TGCNHRFKN 131
>Q4DME4_TRYCR (tr|Q4DME4) DNA-direcetd RNA polymerase II, subunit 9, putative
OS=Trypanosoma cruzi GN=Tc00.1047053506779.60 PE=4 SV=1
Length = 167
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 5/107 (4%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNR---VYRNEVQHSVTEFTQILQDVASDPT 57
NN+LYP+ D R + + C C EV D N+ + +++ TE ++L + A+DPT
Sbjct: 54 NNLLYPENDPLDRQMRWRCNYCRTTEVHDENKLVYILNLKLKTGTTEELELLAEFANDPT 113
Query: 58 LPRTKSVRCSACGHGEAV-FLQATSR-EEGFTLFYVCCNPNCGNRWR 102
R + RC CG + F+ + E TL++ C NP C + W+
Sbjct: 114 AQRDPTKRCRRCGENDVTCFVNPLGQPHEDMTLYFACANPKCRHVWK 160
>Q7RSD7_PLAYO (tr|Q7RSD7) DNA-directed RNA polymerase ii 15.1 kDa polypeptide
OS=Plasmodium yoelii yoelii GN=PY00422 PE=4 SV=1
Length = 226
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Query: 1 NNILYPKEDKKQRILLYACRNCDH---QEVADNNRVYRNEVQHSVTEFTQILQDVASDPT 57
NNILY + DKK + L+Y CR+CD+ ++ ++N V R ++ E I + +D
Sbjct: 11 NNILYARSDKKNKKLIYVCRSCDYISNKQNENHNIVARINYNYNRKEDIYIHPETKNDSA 70
Query: 58 LPRTKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNC 97
L R + C C + EAVFLQ + L YVC N +C
Sbjct: 71 LGRVRDWVCKQCNNSEAVFLQLXEKISYNPMALIYVCTNKDC 112
>Q384T7_9TRYP (tr|Q384T7) DNA-direcetd RNA polymerase II, subunit 9, putative
OS=Trypanosoma brucei GN=Tb11.02.5180 PE=4 SV=1
Length = 133
Score = 60.1 bits (144), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 5/107 (4%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNR---VYRNEVQHSVTEFTQILQDVASDPT 57
NN+LYP+ K+ R++ + C C E+ D N+ + +V+ S E ++L + A+DPT
Sbjct: 20 NNLLYPESGKEDRVMRWRCNYCKTSEIHDENKLVYILNLKVKTSTVEELELLAEFANDPT 79
Query: 58 LPRTKSVRCSACGHGEAV-FLQATSR-EEGFTLFYVCCNPNCGNRWR 102
R + +C C E F+ + E TL++ C N C + W+
Sbjct: 80 AQRDTTKQCPRCAMNEVTCFVNPLGQPHEDMTLYFACANQGCRHVWK 126
>D0A7R2_TRYBG (tr|D0A7R2) DNA-direcetd RNA polymerase II, subunit 9, putative
OS=Trypanosoma brucei gambiense DAL972 GN=TbgDal_XI8320
PE=4 SV=1
Length = 133
Score = 60.1 bits (144), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 5/107 (4%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNR---VYRNEVQHSVTEFTQILQDVASDPT 57
NN+LYP+ K+ R++ + C C E+ D N+ + +V+ S E ++L + A+DPT
Sbjct: 20 NNLLYPESGKEDRVMRWRCNYCKTSEIHDENKLVYILNLKVKTSTVEELELLAEFANDPT 79
Query: 58 LPRTKSVRCSACGHGEAV-FLQATSR-EEGFTLFYVCCNPNCGNRWR 102
R + +C C E F+ + E TL++ C N C + W+
Sbjct: 80 AQRDTTKQCPRCAMNEVTCFVNPLGQPHEDMTLYFACANQGCRHVWK 126
>A6RCK2_AJECN (tr|A6RCK2) DNA-directed RNA polymerase subunit OS=Ajellomyces
capsulata (strain NAm1 / WU24) GN=HCAG_07360 PE=3 SV=1
Length = 104
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 49/103 (47%), Gaps = 30/103 (29%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
+N+LYPKED+ L++ CR C + + AS P LPR
Sbjct: 29 SNLLYPKEDRNTNTLMFTCRTCH-------------------------VGEPASSPCLPR 63
Query: 61 TKSVRCSACGHGEAVFLQATSR--EEGFTLFYVCCNPNCGNRW 101
+ + C +CG EAVF Q+ R E G L+YVCC CGN +
Sbjct: 64 SNKL-CPSCGENEAVFFQSQQRSAETGMKLYYVCC--TCGNVF 103
>A7EUD0_SCLS1 (tr|A7EUD0) Putative uncharacterized protein OS=Sclerotinia
sclerotiorum (strain ATCC 18683 / 1980 / Ss-1)
GN=SS1G_08937 PE=4 SV=1
Length = 119
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 7/73 (9%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPT--L 58
+N+LYPKED L +ACR C + E A ++ V+RN + ++V E + QDV SDPT L
Sbjct: 28 SNMLYPKEDPDTHRLQFACRTCQYSEEAVSSCVFRNILNNAVGETAGVTQDVGSDPTVGL 87
Query: 59 PRTKSVRCSACGH 71
P C CGH
Sbjct: 88 P-----LCLLCGH 95
>B2AV79_PODAN (tr|B2AV79) DNA-directed RNA polymerase subunit OS=Podospora
anserina PE=3 SV=1
Length = 259
Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 39/58 (67%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTL 58
+N+LYPKED+ R L++ CR C+ E A ++ ++RN + ++ E + QDV SDPT+
Sbjct: 34 SNMLYPKEDEADRKLMFTCRTCNFSEEATSSCIFRNVLNNAAGETAGVTQDVGSDPTV 91
>Q0C9E4_ASPTN (tr|Q0C9E4) Putative uncharacterized protein OS=Aspergillus terreus
(strain NIH 2624 / FGSC A1156) GN=ATEG_09690 PE=4 SV=1
Length = 111
Score = 57.0 bits (136), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
+N+LYPKED+ L++ CR C E A + VY+N++ V + + QDV SDPT+
Sbjct: 28 SNLLYPKEDRANNRLMFTCRTCHVGEPASSYCVYQNKLNTQVGDTAGVTQDVGSDPTV-- 85
Query: 61 TKSVRCSACGHGEAVFLQATSREEG 85
+ C+ CG A F E+G
Sbjct: 86 SLPGFCTLCGDEIACFSCGEMSEDG 110
>B8M1I8_TALSN (tr|B8M1I8) DNA directed RNA polymerase II 15 kDa subunit, putative
OS=Talaromyces stipitatus (strain ATCC 10500 / CBS
375.48 / QM 6759 / NRRL 1006) GN=TSTA_091250 PE=4 SV=1
Length = 135
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
+N+LYPKED+ Q L++ CR C E A + VY+N + V E + QDV SDPT+
Sbjct: 29 SNLLYPKEDRVQNRLMFTCRTCHVSEPATSPCVYQNNLNTQVGETAGVTQDVGSDPTVGD 88
Query: 61 T-------KSVRCSACG 70
+ + CS CG
Sbjct: 89 PEFCLHCGEELACSQCG 105
>C4JEG2_UNCRE (tr|C4JEG2) Predicted protein OS=Uncinocarpus reesii (strain UAMH
1704) GN=UREG_00801 PE=4 SV=1
Length = 122
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 7/72 (9%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPT--L 58
+N+LYPKED+ L+++CR C E A ++ V++N++ V + + QDVASDPT L
Sbjct: 29 SNLLYPKEDRTTNTLMFSCRTCHVGEPATSHCVFQNKLNSQVGDTAGVTQDVASDPTVGL 88
Query: 59 PRTKSVRCSACG 70
P C+ CG
Sbjct: 89 P-----FCTLCG 95
>A9V115_MONBE (tr|A9V115) Predicted protein OS=Monosiga brevicollis GN=8754
PE=4 SV=1
Length = 131
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 1 NNILYPKEDKKQRI----LLYACRNC-DHQEVADNNRVYRNEVQHSVTEFTQILQDVASD 55
NN+L P E + L+Y C+ C ++E ADNN Y + V QI DV D
Sbjct: 11 NNMLAPMEKNNEESGEFKLVYTCKYCRKYEEDADNNCTYVSRAIQEVDNLAQINADVRDD 70
Query: 56 PTLPRTKSVRCSACGHGEAVFLQATSREE 84
PTLP + C C +AVF QA S +
Sbjct: 71 PTLPHEDDIECPKCSVKDAVFFQAQSHRD 99
>A6SDC8_BOTFB (tr|A6SDC8) Putative uncharacterized protein OS=Botryotinia
fuckeliana (strain B05.10) GN=BC1G_10911 PE=4 SV=1
Length = 83
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
Query: 3 ILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPT--LPR 60
+LYPKED L +ACR C + E A ++ V+RN + ++V E + QDV SDPT LP
Sbjct: 1 MLYPKEDPDTHRLQFACRTCQYSEEAVSSCVFRNVLNNAVGETAGVTQDVGSDPTVGLP- 59
Query: 61 TKSVRCSACGH 71
C CGH
Sbjct: 60 ----LCLLCGH 66
>C5JZV2_AJEDS (tr|C5JZV2) DNA directed RNA polymerase II 15 kDa subunit
OS=Ajellomyces dermatitidis (strain SLH14081)
GN=BDBG_08096 PE=4 SV=1
Length = 100
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 7/72 (9%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPT--L 58
+N+LYPKED+ L++ CR C E A + VY+N++ + V + + QDV SDPT L
Sbjct: 28 SNLLYPKEDRNTHTLMFTCRTCHVGEPASSPCVYQNKLNNQVGDTAGVTQDVGSDPTVGL 87
Query: 59 PRTKSVRCSACG 70
P C+ CG
Sbjct: 88 P-----LCTLCG 94
>C5G6X9_AJEDR (tr|C5G6X9) DNA directed RNA polymerase II 15 kDa subunit
OS=Ajellomyces dermatitidis (strain ER-3) GN=BDCG_00153
PE=4 SV=1
Length = 100
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 7/72 (9%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPT--L 58
+N+LYPKED+ L++ CR C E A + VY+N++ + V + + QDV SDPT L
Sbjct: 28 SNLLYPKEDRNTHTLMFTCRTCHVGEPASSPCVYQNKLNNQVGDTAGVTQDVGSDPTVGL 87
Query: 59 PRTKSVRCSACG 70
P C+ CG
Sbjct: 88 P-----LCTLCG 94
>B6Q948_PENMQ (tr|B6Q948) DNA directed RNA polymerase II 15 kDa subunit,
putative OS=Penicillium marneffei (strain ATCC 18224 /
CBS 334.59 / QM 7333) GN=PMAA_070860 PE=4 SV=1
Length = 132
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 36/58 (62%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTL 58
+N+LYPKED+ Q L++ CR C E A + VY+N + V E + QDV SDPT+
Sbjct: 29 SNLLYPKEDRVQNRLMFTCRTCHVSEPATSPCVYQNNLNTQVGETAGVTQDVGSDPTV 86
>Q7SBJ7_NEUCR (tr|Q7SBJ7) Predicted protein OS=Neurospora crassa GN=NCU08553
PE=4 SV=1
Length = 230
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPT 57
+N+LYP+E + + LL+ CR C+ E A + +YRN + ++ E + QDVASDPT
Sbjct: 30 SNMLYPREAEDENKLLFTCRTCNFSEPATSTCIYRNILNNAAGETAGVTQDVASDPT 86
>Q0U3A2_PHANO (tr|Q0U3A2) Putative uncharacterized protein OS=Phaeosphaeria
nodorum GN=SNOG_13762 PE=4 SV=1
Length = 157
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
+N+L+P+EDK + LL+ACR C E A ++ V R+++ +V + +VA DPT+
Sbjct: 26 SNLLFPREDKSENKLLFACRTCSFTEEAPSSCVMRHDISSTVGATAGVTAEVAQDPTVGL 85
Query: 61 TKSV 64
+ S+
Sbjct: 86 SNSI 89
>Q96YA8_SULTO (tr|Q96YA8) 112aa long hypothetical DNA-directed RNA polymerase
subunit M OS=Sulfolobus tokodaii GN=ST2261 PE=3 SV=1
Length = 112
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 8/107 (7%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQE--VADNNRVYRNEVQHSVTEFTQILQDVASDPTL 58
+I+ PK+D + +Y C C ++E + + + V+HS+ E T ++ A
Sbjct: 8 GSIMVPKKDNGK--TMYKCPKCGYEEESTSSGSMKIKTVVKHSIKEKTLVVDGDAPPAGA 65
Query: 59 PRTKSVRCSACGHGEAVF--LQATSREEGFTLFYVCCNPNCGNRWRD 103
TK V C ACG+ EA F LQ +E T FY C CG WR+
Sbjct: 66 QITKGVTCPACGNDEAYFWILQTRRADEPPTRFYKCT--KCGKVWRE 110
>Q2TZH6_ASPOR (tr|Q2TZH6) Predicted protein OS=Aspergillus oryzae
GN=AO090011000849 PE=4 SV=1
Length = 122
Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPT--L 58
+N+LYPKED+ L++ CR C E A + VY+N++ V + + QDV SDPT L
Sbjct: 28 SNLLYPKEDRVNNRLMFTCRTCHVGEPASSYCVYQNKLNSQVGDTAGVTQDVGSDPTVCL 87
Query: 59 PR-----TKSVRCSACGHGEAVFLQATSREEGFTLF 89
P + + C +CG L + EGF++
Sbjct: 88 PGFCAHCGEEITCYSCGQPSEDEL-SEDDYEGFSVL 122
>C1H9R9_PARBA (tr|C1H9R9) Putative uncharacterized protein OS=Paracoccidioides
brasiliensis (strain ATCC MYA-826 / Pb01) GN=PAAG_07510
PE=4 SV=1
Length = 99
Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPTLPR 60
+N+LYPKED+ L+Y CR C E A + V++N++ V + + QDV SDPT+
Sbjct: 28 SNLLYPKEDRASNKLMYTCRTCHVGEPATSPCVFQNKLNTQVGDTAGVTQDVGSDPTV-- 85
Query: 61 TKSVRCSACGH 71
C+ CG
Sbjct: 86 -GFPLCTLCGE 95
>D1ZU38_SORMA (tr|D1ZU38) Whole genome shotgun sequence assembly, scaffold_115
OS=Sordaria macrospora GN=SMAC_08817 PE=4 SV=1
Length = 235
Score = 53.1 bits (126), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPT 57
+N+LYP+E + + LL+ CR C+ E A + +YRN + ++ E + QDV SDPT
Sbjct: 30 SNMLYPREAEDENKLLFTCRTCNFSEPATSTCIYRNILNNAAGETAGVTQDVGSDPT 86
>C3NFY6_SULIN (tr|C3NFY6) Transcription termination factor Tfs OS=Sulfolobus
islandicus (strain Y.N.15.51 / Yellowstone #2)
GN=YN1551_0997 PE=3 SV=1
Length = 111
Score = 53.1 bits (126), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 7/106 (6%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQE-VADNNRVYRNEVQHSVTEFTQILQDVASDPTLP 59
N+++ PK+ + I Y C C ++E V + V ++V+HS+ E T IL++
Sbjct: 8 NSMMVPKKSNGKNI--YRCTKCGYEEEVPETTIVVTSKVKHSIKEKTLILEEEEMPSGAQ 65
Query: 60 RTKSVRCSACGHGEAVF--LQATSREEGFTLFYVCCNPNCGNRWRD 103
+ K V C +C + EA F LQ +E T FY C CG WR+
Sbjct: 66 KIKGVLCPSCKNDEAYFWILQTRRADEPPTRFYKCT--KCGKVWRE 109
>A1CSR4_ASPCL (tr|A1CSR4) DNA directed RNA polymerase II 15 kDa subunit, putative
OS=Aspergillus clavatus GN=ACLA_080350 PE=4 SV=1
Length = 122
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 1 NNILYPKEDKKQRILLYACRNCDHQEVADNNRVYRNEVQHSVTEFTQILQDVASDPT--L 58
+N+LYPKED+ L++ CR C E A + VY+N + + V + + QDV SDPT L
Sbjct: 28 SNLLYPKEDRVNNRLMFTCRTCHVGEPATSYCVYQNNLNNQVGDTAGVTQDVGSDPTVCL 87
Query: 59 PRTKSVRCSACGHGEAVF 76
P CS CG F
Sbjct: 88 PG----FCSHCGEEITCF 101