Jatropha Genome Database

JcCB0417241.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0417241.10 + phase: 0 
         (145 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q2QDF7_GOSHI (tr|Q2QDF7) 24-sterol C-methyltransferase OS=Gossyp...    58   3e-07
O24328_RICCO (tr|O24328) S-adenosyl-methionine-sterol-C-methyltr...    55   2e-06
B9RVM5_RICCO (tr|B9RVM5) S-adenosyl-l-methionine:delta24-sterol-...    55   2e-06
B9GFC1_POPTR (tr|B9GFC1) Predicted protein OS=Populus trichocarp...    54   4e-06

>Q2QDF7_GOSHI (tr|Q2QDF7) 24-sterol C-methyltransferase OS=Gossypium hirsutum
          GN=SMT1 PE=2 SV=1
          Length = 346

 Score = 58.2 bits (139), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/46 (63%), Positives = 34/46 (73%)

Query: 1  MSKAGAFDLASGLGGKIEKTEVLSAVEKYSLFFYFYISKIKHEVSN 46
          MSKAGA DLASGLGGKIEK EVLSAVE+Y  +  FY  + +   +N
Sbjct: 1  MSKAGALDLASGLGGKIEKAEVLSAVEQYERYHVFYGGEEEERKAN 46


>O24328_RICCO (tr|O24328) S-adenosyl-methionine-sterol-C-methyltransferase
          OS=Ricinus communis PE=2 SV=1
          Length = 346

 Score = 55.1 bits (131), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/36 (72%), Positives = 30/36 (83%)

Query: 1  MSKAGAFDLASGLGGKIEKTEVLSAVEKYSLFFYFY 36
          MSKAGA DLASG+GGKI+K EVLSAVEKY  +  +Y
Sbjct: 1  MSKAGALDLASGVGGKIDKNEVLSAVEKYEKYHVYY 36


>B9RVM5_RICCO (tr|B9RVM5)
          S-adenosyl-l-methionine:delta24-sterol-C-
          methyltransferase, putative OS=Ricinus communis
          GN=RCOM_0965030 PE=4 SV=1
          Length = 346

 Score = 55.1 bits (131), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/36 (72%), Positives = 30/36 (83%)

Query: 1  MSKAGAFDLASGLGGKIEKTEVLSAVEKYSLFFYFY 36
          MSKAGA DLASG+GGKI+K EVLSAVEKY  +  +Y
Sbjct: 1  MSKAGALDLASGVGGKIDKNEVLSAVEKYEKYHVYY 36


>B9GFC1_POPTR (tr|B9GFC1) Predicted protein OS=Populus trichocarpa
          GN=POPTRDRAFT_829664 PE=4 SV=1
          Length = 346

 Score = 54.3 bits (129), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/36 (69%), Positives = 31/36 (86%)

Query: 1  MSKAGAFDLASGLGGKIEKTEVLSAVEKYSLFFYFY 36
          MSKAGA DLASGLGGKI+K++VLS+VEKY  +  +Y
Sbjct: 1  MSKAGALDLASGLGGKIDKSDVLSSVEKYEKYHVYY 36