Jatropha Genome Database
- JcCB0417211.10
BLASTP 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0417211.10 - phase: 0 /pseudo/partial/short
(34 letters)
Database: trembl
11,636,205 sequences; 3,746,823,912 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
A5AK41_VITVI (tr|A5AK41) Putative uncharacterized protein OS=Vit... 60 1e-07
B9IFD5_POPTR (tr|B9IFD5) Predicted protein (Fragment) OS=Populus... 58 4e-07
A5BPQ2_VITVI (tr|A5BPQ2) Putative uncharacterized protein OS=Vit... 57 8e-07
Q9FT96_ARATH (tr|Q9FT96) Katanin p80 subunit-like protein OS=Ara... 57 9e-07
B9RAD9_RICCO (tr|B9RAD9) Putative uncharacterized protein OS=Ric... 56 1e-06
Q9SMN3_ARATH (tr|Q9SMN3) Putative uncharacterized protein T8P19.... 56 1e-06
D7LRY9_ARALY (tr|D7LRY9) Putative uncharacterized protein OS=Ara... 56 1e-06
B9RMC7_RICCO (tr|B9RMC7) Putative uncharacterized protein OS=Ric... 56 2e-06
D7SH02_VITVI (tr|D7SH02) Whole genome shotgun sequence of line P... 55 2e-06
Q7X9E3_PHAVU (tr|Q7X9E3) Putative uncharacterized protein OS=Pha... 55 2e-06
D7SVN4_VITVI (tr|D7SVN4) Whole genome shotgun sequence of line P... 54 5e-06
>A5AK41_VITVI (tr|A5AK41) Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_007181 PE=4 SV=1
Length = 572
Score = 59.7 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/27 (88%), Positives = 27/27 (100%)
Query: 1 MADWGPVIVAVVLFVLLTPGLLFQIPG 27
MADWGPV++AVVLFVLLTPGLLFQ+PG
Sbjct: 1 MADWGPVVIAVVLFVLLTPGLLFQLPG 27
>B9IFD5_POPTR (tr|B9IFD5) Predicted protein (Fragment) OS=Populus trichocarpa
GN=POPTRDRAFT_252740 PE=4 SV=1
Length = 67
Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/29 (96%), Positives = 28/29 (96%)
Query: 1 MADWGPVIVAVVLFVLLTPGLLFQIPGKG 29
MADWGPVIVAVVLFVLLTPGLLFQIPGK
Sbjct: 1 MADWGPVIVAVVLFVLLTPGLLFQIPGKS 29
>A5BPQ2_VITVI (tr|A5BPQ2) Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_037262 PE=4 SV=1
Length = 71
Score = 56.6 bits (135), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 27/29 (93%)
Query: 1 MADWGPVIVAVVLFVLLTPGLLFQIPGKG 29
MADWGPVIVA VLFVLLTPGLLFQIP KG
Sbjct: 1 MADWGPVIVATVLFVLLTPGLLFQIPAKG 29
>Q9FT96_ARATH (tr|Q9FT96) Katanin p80 subunit-like protein OS=Arabidopsis
thaliana GN=F8L15_120 PE=4 SV=1
Length = 823
Score = 56.6 bits (135), Expect = 9e-07, Method: Composition-based stats.
Identities = 21/28 (75%), Positives = 27/28 (96%)
Query: 1 MADWGPVIVAVVLFVLLTPGLLFQIPGK 28
M+DWGPV+V V+LFV+LTPGLLFQ+PG+
Sbjct: 1 MSDWGPVLVTVILFVMLTPGLLFQLPGR 28
>B9RAD9_RICCO (tr|B9RAD9) Putative uncharacterized protein OS=Ricinus communis
GN=RCOM_1505770 PE=4 SV=1
Length = 69
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/29 (86%), Positives = 28/29 (96%)
Query: 1 MADWGPVIVAVVLFVLLTPGLLFQIPGKG 29
MADWGPVI+AV+LFVLLTPGLLFQIPG+
Sbjct: 1 MADWGPVIIAVILFVLLTPGLLFQIPGRN 29
>Q9SMN3_ARATH (tr|Q9SMN3) Putative uncharacterized protein T8P19.170
OS=Arabidopsis thaliana GN=T8P19.170 PE=4 SV=1
Length = 89
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/29 (86%), Positives = 28/29 (96%)
Query: 1 MADWGPVIVAVVLFVLLTPGLLFQIPGKG 29
MADWGPV+VAV+LFVLLTPGLLFQIP +G
Sbjct: 1 MADWGPVVVAVILFVLLTPGLLFQIPARG 29
>D7LRY9_ARALY (tr|D7LRY9) Putative uncharacterized protein OS=Arabidopsis
lyrata subsp. lyrata GN=ARALYDRAFT_323459 PE=4 SV=1
Length = 84
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/29 (86%), Positives = 28/29 (96%)
Query: 1 MADWGPVIVAVVLFVLLTPGLLFQIPGKG 29
MADWGPV+VAV+LFVLLTPGLLFQIP +G
Sbjct: 1 MADWGPVVVAVILFVLLTPGLLFQIPARG 29
>B9RMC7_RICCO (tr|B9RMC7) Putative uncharacterized protein OS=Ricinus communis
GN=RCOM_1079680 PE=4 SV=1
Length = 69
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/29 (86%), Positives = 29/29 (100%)
Query: 1 MADWGPVIVAVVLFVLLTPGLLFQIPGKG 29
MADWGPV++AVVLFVLL+PGLLFQ+PGKG
Sbjct: 1 MADWGPVVIAVVLFVLLSPGLLFQLPGKG 29
>D7SH02_VITVI (tr|D7SH02) Whole genome shotgun sequence of line PN40024,
scaffold_0.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00008561001 PE=4 SV=1
Length = 138
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/29 (86%), Positives = 28/29 (96%)
Query: 1 MADWGPVIVAVVLFVLLTPGLLFQIPGKG 29
MADWGPV++AVVLFVLLTPGLLFQ+PGK
Sbjct: 22 MADWGPVLIAVVLFVLLTPGLLFQVPGKN 50
>Q7X9E3_PHAVU (tr|Q7X9E3) Putative uncharacterized protein OS=Phaseolus
vulgaris PE=4 SV=1
Length = 69
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/29 (86%), Positives = 28/29 (96%)
Query: 1 MADWGPVIVAVVLFVLLTPGLLFQIPGKG 29
MADWGPVI+AVVLFVLL+PGLLFQIP +G
Sbjct: 1 MADWGPVIIAVVLFVLLSPGLLFQIPSRG 29
>D7SVN4_VITVI (tr|D7SVN4) Whole genome shotgun sequence of line PN40024,
scaffold_68.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00033068001 PE=4 SV=1
Length = 69
Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/29 (82%), Positives = 27/29 (93%)
Query: 1 MADWGPVIVAVVLFVLLTPGLLFQIPGKG 29
MADWGPV++AVVLFVLLTPGLLFQ+PG
Sbjct: 1 MADWGPVVIAVVLFVLLTPGLLFQLPGNN 29