Jatropha Genome Database

JcCB0400871.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0400871.10 - phase: 0 /partial
         (84 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A5C839_VITVI (tr|A5C839) Putative uncharacterized protein OS=Vit...    62   2e-08
D7SYK6_VITVI (tr|D7SYK6) Whole genome shotgun sequence of line P...    62   2e-08
B9RZR2_RICCO (tr|B9RZR2) Map3k delta-1 protein kinase, putative ...    58   3e-07

>A5C839_VITVI (tr|A5C839) Putative uncharacterized protein OS=Vitis vinifera
          GN=VITISV_034769 PE=4 SV=1
          Length = 760

 Score = 62.0 bits (149), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/43 (74%), Positives = 36/43 (83%), Gaps = 1/43 (2%)

Query: 1  MDTQPAEELLRKIQELEAGQAHLEQEMSKLKLTSDPKSEHDLQ 43
          MDT PAEELLRKIQELEAG AHL++EMSKL + S PKS+H  Q
Sbjct: 1  MDTPPAEELLRKIQELEAGHAHLKEEMSKL-MVSGPKSDHGHQ 42


>D7SYK6_VITVI (tr|D7SYK6) Whole genome shotgun sequence of line PN40024,
          scaffold_77.assembly12x (Fragment) OS=Vitis vinifera
          GN=VIT_00034988001 PE=4 SV=1
          Length = 732

 Score = 62.0 bits (149), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/43 (74%), Positives = 36/43 (83%), Gaps = 1/43 (2%)

Query: 1  MDTQPAEELLRKIQELEAGQAHLEQEMSKLKLTSDPKSEHDLQ 43
          MDT PAEELLRKIQELEAG AHL++EMSKL + S PKS+H  Q
Sbjct: 1  MDTPPAEELLRKIQELEAGHAHLKEEMSKL-MVSGPKSDHGHQ 42


>B9RZR2_RICCO (tr|B9RZR2) Map3k delta-1 protein kinase, putative OS=Ricinus
          communis GN=RCOM_1000600 PE=4 SV=1
          Length = 796

 Score = 58.2 bits (139), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/43 (69%), Positives = 37/43 (86%), Gaps = 1/43 (2%)

Query: 1  MDTQPA-EELLRKIQELEAGQAHLEQEMSKLKLTSDPKSEHDL 42
          M++ PA EELL+KIQELEAGQAHL+++MSK KLTSDP S+  L
Sbjct: 1  MESPPAAEELLKKIQELEAGQAHLKEQMSKFKLTSDPVSDSQL 43